Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.16G160500 Glycine max HOM05D000007 ORTHO05D000039 2.1e-61 238.8 118 100.0
Glyma.10G199800 Glycine max HOM05D000007 ORTHO05D000039 7.1e-09 64.3 118 39.0
RcHm_v2.0_Chr5g0031751 Rosa chinensis HOM05D000007 ORTHO05D000039 2.3e-07 59.3 40 67.5
VMungo0720G0867 Vigna mungo HOM05D000007 ORTHO05D000039 2.3e-07 59.3 113 40.7
FAN11G0403 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.9e-07 58.5 47 57.4
Lj1C671T7 Lonicera japonica HOM05D000007 ORTHO05D000039 5.1e-07 58.2 37 67.6
Prupe.4G150700 Prunus persica HOM05D000007 ORTHO05D000039 5.1e-07 58.2 44 61.4
EL10Ac9g20885 Beta vulgaris HOM05D000007 ORTHO05D031680 6.7e-07 57.8 55 52.7
FAN21G2178 Fragaria x ananassa HOM05D000007 ORTHO05D000039 6.7e-07 57.8 51 52.9
Lj5g0027399 Lotus japonicus HOM05D000007 ORTHO05D000039 6.7e-07 57.8 122 37.7
RcHm_v2.0_Chr5g0031771 Rosa chinensis HOM05D000007 ORTHO05D000039 6.7e-07 57.8 38 68.4
FAN11G1650 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.1e-06 57.0 47 57.4
MD03G1028000 Malus domestica HOM05D000007 ORTHO05D000039 1.1e-06 57.0 40 62.5
FvH4_5g11830 Fragaria vesca HOM05D000007 ORTHO05D000039 1.5e-06 56.6 43 62.8
FAN08G3637 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.5e-06 56.6 43 62.8
FAN18G2360 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.5e-06 56.6 43 62.8
SalBow7G4098 Salvia bowleyana HOM05D000007 ORTHO05D000039 1.5e-06 56.6 40 65.0
Lj1C663T1 Lonicera japonica HOM05D000007 ORTHO05D000039 1.9e-06 56.2 37 67.6
Lj1P529T7 Lonicera japonica HOM05D000007 ORTHO05D000039 1.9e-06 56.2 37 67.6
QL09p021311 Quercus lobata HOM05D000007 ORTHO05D000039 1.9e-06 56.2 49 57.1
AUR62015026 Chenopodium quinoa HOM05D000007 ORTHO05D000039 3.3e-06 55.5 37 64.9
AUR62029087 Chenopodium quinoa HOM05D000007 ORTHO05D000039 3.3e-06 55.5 37 64.9
Dinv34673 Davidia involucrata HOM05D000007 ORTHO05D000017 3.3e-06 55.5 36 63.9
FAN18G4462 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.3e-06 55.5 43 62.8
Glyma.20G190700 Glycine max HOM05D000007 ORTHO05D000039 3.3e-06 55.5 43 58.1
Lj1C664T4 Lonicera japonica HOM05D000007 ORTHO05D000039 3.3e-06 55.5 41 61.0
MD03G1028300 Malus domestica HOM05D000007 ORTHO05D000039 3.3e-06 55.5 40 60.0
Peaxi162Scf00469g00087 Petunia axillaris HOM05D000007 ORTHO05D000039 3.3e-06 55.5 38 63.2
Prupe.5G081800 Prunus persica HOM05D000007 ORTHO05D000039 3.3e-06 55.5 44 56.8
QL08p020302 Quercus lobata HOM05D000007 ORTHO05D000039 3.3e-06 55.5 36 69.4
Lj1C663T2 Lonicera japonica HOM05D000007 ORTHO05D000039 4.3e-06 55.1 37 64.9
Medtr4g011660 Medicago truncatula HOM05D000007 ORTHO05D000017 4.3e-06 55.1 51 52.9
Peaxi162Scf00038g00024 Petunia axillaris HOM05D000007 ORTHO05D000039 4.3e-06 55.1 37 67.6
Ciclev10028448m.g Citrus clementina HOM05D000007 ORTHO05D000039 5.6e-06 54.7 37 64.9
Dinv12702 Davidia involucrata HOM05D000007 ORTHO05D000039 5.6e-06 54.7 41 56.1
Nitab4.5_0001774g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000521 5.6e-06 54.7 36 66.7
MSTRG.15075 Avicennia marina HOM05D000007 ORTHO05D000039 7.4e-06 54.3 36 66.7
Dinv38256 Davidia involucrata HOM05D000007 ORTHO05D000017 7.4e-06 54.3 47 59.6
Hma1.2p1_0036F.1_g023640 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 7.4e-06 54.3 47 55.3
MD15G1381400 Malus domestica HOM05D000007 ORTHO05D000039 7.4e-06 54.3 40 60.0
Actinidia37850 Actinidia chinensis HOM05D000007 ORTHO05D000039 9.6e-06 53.9 40 65.0
CSS0047811 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 9.6e-06 53.9 42 61.9
Gohir.A11G282760 Gossypium hirsutum HOM05D000007 ORTHO05D000039 9.6e-06 53.9 37 64.9
Gohir.D11G296400 Gossypium hirsutum HOM05D000007 ORTHO05D000039 9.6e-06 53.9 37 64.9
Gorai.007G319500 Gossypium raimondii HOM05D000007 ORTHO05D000039 9.6e-06 53.9 37 64.9
Hma1.2p1_0036F.1_g023670 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 9.6e-06 53.9 40 60.0


User provided reference genes

Program Settings