Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.16G157600 Glycine max HOM05D007473 ORTHO05D009459 4.2e-53 211.1 106 100.0
Glyma.02G075700 Glycine max HOM05D007473 ORTHO05D009459 1.8e-51 205.7 106 98.1
Phvul.004G085900 Phaseolus vulgaris HOM05D007473 ORTHO05D009459 1.5e-50 202.6 106 95.3
VMungo0464G1647 Vigna mungo HOM05D007473 ORTHO05D009459 1.4e-48 196.1 107 93.5
Lalb_Chr19g0129841 Lupinus albus HOM05D007473 ORTHO05D009459 8.8e-43 176.8 104 84.6
Lalb_Chr01g0009921 Lupinus albus HOM05D007473 ORTHO05D009459 4.4e-42 174.5 106 83.0
Lj5g0014701 Lotus japonicus HOM05D007473 ORTHO05D009459 4.0e-35 151.4 103 74.8
TPR.G30581 Trifolium pratense HOM05D007473 ORTHO05D009459 4.1e-32 141.4 101 72.3
Psat6g188360 Pisum sativum HOM05D007473 ORTHO05D009459 1.6e-31 139.4 101 72.3
Potri.013G116100 Populus trichocarpa HOM05D007473 ORTHO05D009459 3.9e-30 134.8 104 69.2
Medtr1g097080 Medicago truncatula HOM05D007473 ORTHO05D009459 6.6e-30 134.0 101 71.3
QL09p016421 Quercus lobata HOM05D007473 ORTHO05D009459 1.1e-29 133.3 103 69.9
QL02p034734 Quercus lobata HOM05D007473 ORTHO05D009459 3.3e-29 131.7 103 69.9
Sc23g0001050 Simmondsia chinensis HOM05D007473 ORTHO05D009459 3.3e-29 131.7 106 67.0
Ah.05g172820 Amaranthus hybridus HOM05D007473 ORTHO05D009459 4.3e-29 131.3 105 67.6
Sabra19G0097100 Salix brachista HOM05D007473 ORTHO05D009459 7.3e-29 130.6 104 67.3
Potri.019G086700 Populus trichocarpa HOM05D007473 ORTHO05D009459 1.2e-28 129.8 104 67.3
Cfa018218 Carpinus fangiana HOM05D007473 ORTHO05D009459 2.8e-28 128.6 104 65.4
GSVIVG01036821001 Vitis vinifera HOM05D007473 ORTHO05D009459 2.8e-28 128.6 104 66.3
Cpa.g.sc66.113 Carica papaya HOM05D007473 ORTHO05D009459 3.6e-28 128.3 106 67.0
Hma1.2p1_0510F.1_g168850 Hydrangea macrophylla HOM05D007473 ORTHO05D009459 6.2e-28 127.5 104 66.3
Aqoxy5G02488 Aquilegia oxysepala HOM05D007473 ORTHO05D009459 8.0e-28 127.1 104 65.4
ClCG09G010330 Citrullus lanatus HOM05D007473 ORTHO05D009459 1.0e-27 126.7 103 65.0
MELO3C023649.2 Cucumis melo HOM05D007473 ORTHO05D009459 1.0e-27 126.7 103 65.0
Duzib116G0725 Durio zibethinus HOM05D007473 ORTHO05D009459 1.0e-27 126.7 104 66.3
MD10G1044400 Malus domestica HOM05D007473 ORTHO05D009459 1.0e-27 126.7 103 69.9
AUR62004677 Chenopodium quinoa HOM05D000623 ORTHO05D007511 1.4e-27 126.3 104 65.4
AUR62023594 Chenopodium quinoa HOM05D007473 ORTHO05D009459 1.8e-27 125.9 106 64.2
MD05G1038600 Malus domestica HOM05D007473 ORTHO05D009459 1.8e-27 125.9 103 70.9
Prupe.8G051200 Prunus persica HOM05D007473 ORTHO05D009459 2.3e-27 125.6 103 68.0
Manes.02G188900 Manihot esculenta HOM05D007473 ORTHO05D009459 3.1e-27 125.2 104 65.4
Manes.18G098100 Manihot esculenta HOM05D007473 ORTHO05D009459 3.1e-27 125.2 106 67.0
CsaV3_7G024330 Cucumis sativus L. HOM05D007473 ORTHO05D009459 4.0e-27 124.8 103 64.1
Atru.chr13.1869 Acer truncatum HOM05D007473 ORTHO05D009459 5.2e-27 124.4 105 64.8
Haze_17885 Corylus avellana HOM05D007473 ORTHO05D009459 5.2e-27 124.4 103 64.1
Oeu054499.1 Olea europaea HOM05D007473 ORTHO05D009459 1.5e-26 122.9 104 63.5
MSTRG.25424 Avicennia marina HOM05D007473 ORTHO05D009459 2.0e-26 122.5 105 65.7
Nitab4.5_0000051g0010 Nicotiana tabacum HOM05D007473 ORTHO05D009459 2.0e-26 122.5 104 63.5
Nitab4.5_0004159g0050 Nicotiana tabacum HOM05D007473 ORTHO05D009459 4.4e-26 121.3 104 62.5
Thecc.08G199100 Theobroma cacao HOM05D007473 ORTHO05D009459 5.8e-26 120.9 104 64.4
Gohir.A09G117600 Gossypium hirsutum HOM05D007473 ORTHO05D009459 1.3e-25 119.8 104 63.5
Gohir.D09G114400 Gossypium hirsutum HOM05D007473 ORTHO05D009459 1.3e-25 119.8 104 63.5
Gorai.006G132300 Gossypium raimondii HOM05D007473 ORTHO05D009459 1.3e-25 119.8 104 63.5
TWI59G1410 Tripterygium wilfordii HOM05D007473 ORTHO05D009459 1.3e-25 119.8 104 62.5
Ciclev10003143m.g Citrus clementina HOM05D007473 ORTHO05D009459 2.2e-25 119.0 104 63.5
Nn1g08531 Nelumbo nucifera HOM05D007473 ORTHO05D009459 2.9e-25 118.6 104 61.5
PGSC0003DMG400030214 Solanum tuberosum HOM05D007473 ORTHO05D009459 2.9e-25 118.6 104 62.5
Duzib211G0408 Durio zibethinus HOM05D007473 ORTHO05D009459 3.7e-25 118.2 104 63.5
Solyc11g013850.2 Solanum lycopersicum HOM05D007473 ORTHO05D009459 3.7e-25 118.2 104 62.5
Sopen11g008770 Solanum pennellii HOM05D007473 ORTHO05D009459 3.7e-25 118.2 104 62.5
CiPaw.15G006600 Carya illinoinensis HOM05D007473 ORTHO05D009459 6.4e-25 117.5 104 64.4
SGA_v2.0_scaffold25G11079 Striga asiatica HOM05D007473 ORTHO05D009459 6.4e-25 117.5 99 66.7
Sp5g26890 Schrenkiella parvula HOM05D007473 ORTHO05D009459 8.3e-25 117.1 107 60.7
SpUn0020_0080 Schrenkiella parvula HOM05D007473 ORTHO05D009459 8.3e-25 117.1 107 60.7
TAR628G1168 Trochodendron aralioides HOM05D007473 ORTHO05D009459 8.3e-25 117.1 107 62.6
Thhalv10019351m.g Eutrema salsugineum HOM05D007473 ORTHO05D009459 1.1e-24 116.7 107 59.8
Eucgr.F04148 Eucalyptus grandis HOM05D007473 ORTHO05D009459 4.1e-24 114.8 101 64.4
AT1G71865 Arabidopsis thaliana HOM05D007473 ORTHO05D009459 7.0e-24 114.0 104 61.5
AL2G31450 Arabidopsis lyrata HOM05D007473 ORTHO05D009459 9.2e-24 113.6 104 61.5
COL.COLO4_36790 Corchorus olitorius HOM05D007473 ORTHO05D009459 1.2e-23 113.2 106 60.4
EL10Ac3g06462 Beta vulgaris HOM05D007473 ORTHO05D009459 1.6e-23 112.8 99 62.6
CARHR290890 Cardamine hirsuta HOM05D007473 ORTHO05D009459 1.6e-23 112.8 101 62.4
Migut.C01206 Erythranthe guttata HOM05D007473 ORTHO05D009459 1.6e-23 112.8 103 64.1
Sed0021533 Sechium edule HOM05D007473 ORTHO05D009459 1.6e-23 112.8 104 58.7
Carub.0002s1863 Capsella rubella HOM05D007473 ORTHO05D009459 4.6e-23 111.3 104 60.6
SalBow7G0569 Salvia bowleyana HOM05D007473 ORTHO05D009459 4.6e-23 111.3 104 59.6
BolC6t39645H Brassica oleracea HOM05D007473 ORTHO05D009459 7.8e-23 110.5 107 58.9
BraA07t31366Z Brassica rapa HOM05D007473 ORTHO05D009459 7.8e-23 110.5 107 58.9
CANSAT25G2275 Cannabis sativa HOM05D007473 ORTHO05D009459 7.8e-23 110.5 105 62.9
BcaC08g46619 Brassica carinata HOM05D007473 ORTHO05D009459 1.0e-22 110.2 107 58.9
A07p38010 Brassica napus HOM05D007473 ORTHO05D009459 1.0e-22 110.2 107 58.9
Cc00_g18070 Coffea canephora HOM05D007473 ORTHO05D009459 1.0e-22 110.2 105 61.0
PSO017G2761 Papaver somniferum HOM05D007473 ORTHO05D009459 1.3e-22 109.8 104 59.6
Peaxi162Scf00476g00621 Petunia axillaris HOM05D007473 ORTHO05D009459 6.6e-22 107.5 90 64.4
Sabra13G0098400 Salix brachista HOM05D007473 ORTHO05D009459 8.6e-22 107.1 99 59.6
EL10Ac8g20095 Beta vulgaris HOM05D007473 ORTHO05D009459 1.1e-21 106.7 99 59.6
Aa31LG4G8770 Aethionema arabicum HOM05D007473 ORTHO05D009459 1.5e-21 106.3 100 60.0
Oeu017869.1 Olea europaea HOM05D007473 ORTHO05D009459 1.5e-21 106.3 104 58.7
BcaC08g45751 Brassica carinata HOM05D007473 ORTHO05D009459 1.9e-21 105.9 107 57.9
BolC6t38636H Brassica oleracea HOM05D007473 ORTHO05D009459 1.9e-21 105.9 107 57.9
CSS0009978 Camellia sinensis var. sinensis HOM05D007473 ORTHO05D009459 1.9e-21 105.9 89 62.9
ATR0584G170 Amborella trichopoda HOM05D007473 ORTHO05D009459 3.3e-21 105.1 104 56.7
A07p30540 Brassica napus HOM05D007473 ORTHO05D009459 3.3e-21 105.1 107 57.9
Os01g0871350 Oryza sativa ssp. japonica HOM05D007473 ORTHO05D009459 3.3e-21 105.1 106 56.6
C06p35300 Brassica napus HOM05D007473 ORTHO05D009459 5.6e-21 104.4 104 58.7
EL10Ac1g01496 Beta vulgaris HOM05D007473 ORTHO05D009459 1.2e-20 103.2 99 59.6
THA.LOC104800103 Tarenaya hassleriana HOM05D007473 ORTHO05D009459 3.6e-20 101.7 102 58.8
BraA07t30689Z Brassica rapa HOM05D007473 ORTHO05D009459 6.2e-20 100.9 107 56.1
Hund27069 Selenicereus undatus HOM05D007473 ORTHO05D009459 5.2e-19 97.8 84 60.7
Zm00001eb289250 Zea mays HOM05D007473 ORTHO05D009459 1.2e-18 96.7 107 55.1
BcaC08g46617 Brassica carinata HOM05D007473 ORTHO05D009459 1.4e-16 89.7 113 52.2
SEGI_38346 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 2.7e-15 85.5 106 50.0
EL10Ac8g20080 Beta vulgaris HOM05D007473 ORTHO05D009459 2.3e-14 82.4 95 54.7
Aa31LG7G6620 Aethionema arabicum HOM05D007473 ORTHO05D009459 3.9e-14 81.6 84 58.3
Zm00001eb348670 Zea mays HOM05D007473 ORTHO05D009459 1.9e-13 79.3 93 52.7
EL10Ac7g17167 Beta vulgaris HOM05D007473 ORTHO05D009459 6.2e-12 74.3 68 63.2
EL10Ac8g20008 Beta vulgaris HOM05D007473 ORTHO05D009459 6.2e-12 74.3 80 58.8
BcaB03g15623 Brassica carinata HOM05D007473 ORTHO05D009459 8.1e-12 73.9 107 46.7
EL10Ac4g08661 Beta vulgaris HOM05D007473 ORTHO05D009459 4.4e-10 68.2 99 44.4
Hund16811 Selenicereus undatus HOM05D007473 ORTHO05D009459 1.6e-07 59.7 65 55.4


User provided reference genes

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