Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.16G147700 Glycine max HOM05D006396 ORTHO05D008172 8.5e-151 537.0 269 100.0
VMungo0464G1242 Vigna mungo HOM05D006396 ORTHO05D008172 7.3e-118 427.6 277 83.4
Phvul.004G069700 Phaseolus vulgaris HOM05D006396 ORTHO05D008172 1.1e-116 423.7 277 82.3
Glyma.02G066600 Glycine max HOM05D006396 ORTHO05D008172 2.4e-113 412.5 268 83.6
Lj1g0009632 Lotus japonicus HOM05D006396 ORTHO05D008172 4.6e-104 381.7 270 74.8
arahy.Tifrunner.gnm1.ann1.Q1FZEB Arachis hypogaea HOM05D006396 ORTHO05D008172 3.6e-101 372.1 275 76.4
arahy.Tifrunner.gnm1.ann1.P0PZ58 Arachis hypogaea HOM05D006396 ORTHO05D008172 1.1e-100 370.5 274 75.9
Thecc.04G048300 Theobroma cacao HOM05D006396 ORTHO05D008172 6.9e-100 367.9 272 72.8
Lalb_Chr14g0364101 Lupinus albus HOM05D006396 ORTHO05D008172 1.2e-99 367.1 275 72.7
Cfa007142 Carpinus fangiana HOM05D006396 ORTHO05D008172 3.4e-99 365.5 265 73.6
QL02p069325 Quercus lobata HOM05D006396 ORTHO05D008172 4.5e-99 365.2 273 72.2
Haze_14981 Corylus avellana HOM05D006396 ORTHO05D008172 2.9e-98 362.5 267 72.7
Ca_08202_v3 Cicer arietinum L. HOM05D006396 ORTHO05D008172 6.4e-98 361.3 277 72.6
COL.COLO4_13379 Corchorus olitorius HOM05D006396 ORTHO05D008172 1.1e-97 360.5 270 72.2
Medtr7g084160 Medicago truncatula HOM05D006396 ORTHO05D008172 1.1e-97 360.5 268 70.9
Gohir.D11G068100 Gossypium hirsutum HOM05D006396 ORTHO05D008172 2.4e-97 359.4 268 72.4
Gorai.007G072900 Gossypium raimondii HOM05D006396 ORTHO05D008172 2.4e-97 359.4 268 72.4
Manes.11G076200 Manihot esculenta HOM05D006396 ORTHO05D008172 7.1e-97 357.8 270 71.9
Gohir.A11G063800 Gossypium hirsutum HOM05D006396 ORTHO05D008172 6.0e-96 354.8 266 71.1
Dinv33276 Davidia involucrata HOM05D006396 ORTHO05D008172 1.0e-95 354.0 232 81.5
GSVIVG01032980001 Vitis vinifera HOM05D006396 ORTHO05D008172 2.3e-95 352.8 267 72.3
CiPaw.04G001100 Carya illinoinensis HOM05D006396 ORTHO05D008172 5.1e-95 351.7 269 70.3
Psat0s4148g0040 Pisum sativum HOM05D006396 ORTHO05D008172 6.7e-95 351.3 271 71.6
Cpa.g.sc70.60 Carica papaya HOM05D006396 ORTHO05D008172 8.7e-95 350.9 231 79.7
TPR.G15411 Trifolium pratense HOM05D006396 ORTHO05D008172 1.9e-94 349.7 268 73.5
Ciclev10016116m.g Citrus clementina HOM05D006396 ORTHO05D008172 2.5e-94 349.4 273 70.3
TAR622G0848 Trochodendron aralioides HOM05D006396 ORTHO05D008172 7.4e-94 347.8 265 74.3
Oeu041974.1 Olea europaea HOM05D006396 ORTHO05D008172 1.6e-93 346.7 272 68.8
Sabra16G0313400 Salix brachista HOM05D006396 ORTHO05D008172 1.6e-93 346.7 274 71.2
Potri.001G463200 Populus trichocarpa HOM05D006396 ORTHO05D008172 2.8e-93 345.9 278 69.4
Sabra16G0314900 Salix brachista HOM05D006396 ORTHO05D008172 3.6e-93 345.5 274 71.5
Atru.chr6.2699 Acer truncatum HOM05D006396 ORTHO05D008172 4.8e-93 345.1 239 77.8
Nn4g22123 Nelumbo nucifera HOM05D006396 ORTHO05D008172 6.2e-93 344.7 229 78.2
Hund12907 Selenicereus undatus HOM05D006396 ORTHO05D008172 1.4e-92 343.6 226 77.4
PGR142G1470 Punica granatum HOM05D006396 ORTHO05D008172 1.8e-92 343.2 266 70.7
FAN14G4577 Fragaria x ananassa HOM05D006396 ORTHO05D008172 4.0e-92 342.0 245 74.3
RcHm_v2.0_Chr2g0176531 Rosa chinensis HOM05D006396 ORTHO05D008172 4.0e-92 342.0 204 86.3
SGA_v2.0_scaffold174G39282 Striga asiatica HOM05D006396 ORTHO05D008172 5.3e-92 341.7 211 82.0
FAN05G4097 Fragaria x ananassa HOM05D006396 ORTHO05D008172 6.9e-92 341.3 245 73.9
MSTRG.15316 Avicennia marina HOM05D006396 ORTHO05D008172 1.5e-91 340.1 262 71.0
SalBow1G8636 Salvia bowleyana HOM05D006396 ORTHO05D008172 2.0e-91 339.7 208 82.7
FAN09G2227 Fragaria x ananassa HOM05D006396 ORTHO05D008172 2.6e-91 339.3 245 73.9
Rhsim08G0038900 Rhododendron simsii HOM05D006396 ORTHO05D008172 7.6e-91 337.8 196 87.2
Ah.03g136630 Amaranthus hybridus HOM05D006396 ORTHO05D008172 1.7e-90 336.7 265 69.1
vmacro18382 Vaccinium macrocarpon HOM05D006396 ORTHO05D008172 1.7e-90 336.7 260 70.4
AUR62017434 Chenopodium quinoa HOM05D006396 ORTHO05D008172 2.2e-90 336.3 268 68.3
CANSAT21G0889 Cannabis sativa HOM05D006396 ORTHO05D008172 3.8e-90 335.5 281 67.3
CAN.G1108.4 Capsicum annuum HOM05D006396 ORTHO05D008172 3.8e-90 335.5 224 79.0
Eucgr.I01598 Eucalyptus grandis HOM05D006396 ORTHO05D008172 3.8e-90 335.5 266 71.1
AUR62037820 Chenopodium quinoa HOM05D006396 ORTHO05D008172 6.4e-90 334.7 267 68.5
THA.LOC104825656 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 1.9e-89 333.2 269 68.0
Nitab4.5_0000139g0180 Nicotiana tabacum HOM05D006396 ORTHO05D008172 3.2e-89 332.4 209 81.8
Prupe.3G313700 Prunus persica HOM05D006396 ORTHO05D008172 4.2e-89 332.0 194 88.1
Hma1.2p1_1389F.1_g279970 Hydrangea macrophylla HOM05D006396 ORTHO05D008172 5.5e-89 331.6 187 88.8
Solyc02g005210.3 Solanum lycopersicum HOM05D006396 ORTHO05D008172 7.1e-89 331.3 205 84.4
unitig_32.g11883 Utricularia gibba HOM05D006396 ORTHO05D008172 1.2e-88 330.5 257 69.3
PGSC0003DMG400014532 Solanum tuberosum HOM05D006396 ORTHO05D008172 1.6e-88 330.1 233 75.1
TWI39G0493 Tripterygium wilfordii HOM05D006396 ORTHO05D008172 2.1e-88 329.7 274 69.3
Sopen02g001100 Solanum pennellii HOM05D006396 ORTHO05D008172 3.5e-88 328.9 232 75.0
MD17G1006700 Malus domestica HOM05D006396 ORTHO05D008172 4.6e-88 328.6 188 88.8
DCAR_014466 Daucus carota HOM05D006396 ORTHO05D008172 6.0e-88 328.2 228 75.4
Nitab4.5_0005452g0030 Nicotiana tabacum HOM05D006396 ORTHO05D008172 6.0e-88 328.2 209 81.3
Sed0011277 Sechium edule HOM05D006396 ORTHO05D008172 6.0e-88 328.2 216 77.3
THA.LOC104805299 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 7.9e-88 327.8 200 84.0
Aa31LG2G5850 Aethionema arabicum HOM05D006396 ORTHO05D008172 1.3e-87 327.0 236 72.5
ClCG01G007850 Citrullus lanatus HOM05D006396 ORTHO05D008172 2.3e-87 326.2 217 77.9
HanXRQChr17g0550901 Helianthus annuus HOM05D006396 ORTHO05D008172 2.3e-87 326.2 277 69.0
CsaV3_5G024930 Cucumis sativus L. HOM05D006396 ORTHO05D008172 3.0e-87 325.9 267 67.8
MD09G1002500 Malus domestica HOM05D006396 ORTHO05D008172 3.0e-87 325.9 297 65.3
Lj7A617G76 Lonicera japonica HOM05D006396 ORTHO05D008172 3.9e-87 325.5 187 87.2
BolC7t44094H Brassica oleracea HOM05D006396 ORTHO05D008172 1.5e-86 323.6 208 80.8
Actinidia37717 Actinidia chinensis HOM05D006396 ORTHO05D008172 2.5e-86 322.8 206 81.6
BcaNung07107 Brassica carinata HOM05D006396 ORTHO05D008172 9.6e-86 320.9 208 79.8
C07p35740 Brassica napus HOM05D006396 ORTHO05D008172 9.6e-86 320.9 208 79.8
A06p41790 Brassica napus HOM05D006396 ORTHO05D008172 1.3e-85 320.5 208 79.8
CARHR147730 Cardamine hirsuta HOM05D006396 ORTHO05D008172 1.3e-85 320.5 205 81.0
ATR0582G370 Amborella trichopoda HOM05D006396 ORTHO05D008172 1.6e-85 320.1 234 72.2
Aqoxy5G03069 Aquilegia oxysepala HOM05D006396 ORTHO05D008172 1.6e-85 320.1 282 66.3
C02p53250 Brassica napus HOM05D006396 ORTHO05D008172 1.6e-85 320.1 206 81.1
ECA246G0184 Erigeron canadensis HOM05D006396 ORTHO05D008172 1.6e-85 320.1 191 85.3
Carub.0005s0471 Capsella rubella HOM05D006396 ORTHO05D008172 2.8e-85 319.3 205 80.0
Sp2g15830 Schrenkiella parvula HOM05D006396 ORTHO05D008172 2.8e-85 319.3 203 80.3
Sc03g0005260 Simmondsia chinensis HOM05D006396 ORTHO05D008172 6.2e-85 318.2 186 84.9
Thhalv10004768m.g Eutrema salsugineum HOM05D006396 ORTHO05D008172 8.1e-85 317.8 208 79.3
BcaC06g31047 Brassica carinata HOM05D006396 ORTHO05D008172 1.1e-84 317.4 208 78.4
BolC2t11397H Brassica oleracea HOM05D006396 ORTHO05D008172 1.4e-84 317.0 206 80.1
AL5G15550 Arabidopsis lyrata HOM05D006396 ORTHO05D008172 3.1e-84 315.8 205 79.5
AT3G26710 Arabidopsis thaliana HOM05D006396 ORTHO05D008172 4.0e-84 315.5 205 79.0
Lsat_1_v5_gn_3_104821 Lactuca sativa HOM05D006396 ORTHO05D008172 5.3e-84 315.1 273 65.9
CSS0007606 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 1.5e-83 313.5 202 82.2
CDE05G2379 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 7.6e-83 311.2 229 71.6
Cc07_g01330 Coffea canephora HOM05D006396 ORTHO05D008172 3.8e-82 308.9 271 63.8
BraA02t08477Z Brassica rapa HOM05D006396 ORTHO05D008172 8.4e-82 307.8 186 84.4
PSO478G0237 Papaver somniferum HOM05D006396 ORTHO05D008172 8.4e-82 307.8 246 68.3
Os11g0526200 Oryza sativa ssp. japonica HOM05D006396 ORTHO05D008172 1.4e-81 307.0 190 78.9
PSO017G3463 Papaver somniferum HOM05D006396 ORTHO05D008172 1.4e-81 307.0 190 81.6
HPP92_009800 Vanilla planifolia HOM05D006396 ORTHO05D008172 2.5e-81 306.2 250 66.0
Zm00001eb198120 Zea mays HOM05D006396 ORTHO05D008172 5.5e-81 305.1 185 81.1
Migut.L00475 Erythranthe guttata HOM05D006396 ORTHO05D008172 5.9e-75 285.0 269 60.2
EL10Ac6g13409 Beta vulgaris HOM05D006396 ORTHO05D008172 2.5e-73 279.6 277 59.2
Mapoly0054s0013 Marchantia polymorpha HOM05D006396 ORTHO05D008172 3.6e-72 275.8 195 68.7
CSS0000498 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 4.6e-72 275.4 199 75.4
BcaC03g17380 Brassica carinata HOM05D006396 ORTHO05D008172 2.2e-69 266.5 170 82.4
SMO146G0400 Selaginella moellendorffii HOM05D006396 ORTHO05D008172 9.1e-68 261.2 196 64.8
CBR_g29738 Chara braunii HOM05D006396 ORTHO05D008172 2.1e-64 250.0 192 63.0
FvH4_6g54310 Fragaria vesca HOM05D006396 ORTHO05D008172 3.3e-62 242.7 183 71.6
Duzib147G0670 Durio zibethinus HOM05D006396 ORTHO05D008172 1.4e-60 237.3 270 53.7
Pp3c2_10260 Physcomitrium patens HOM05D006396 ORTHO05D008172 3.1e-60 236.1 197 58.9
MELO3C005101.2 Cucumis melo HOM05D006396 ORTHO05D008172 9.4e-57 224.6 163 73.0
CDE05G2841 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 3.6e-56 222.6 166 71.7
SGA_v2.0_scaffold174G39277 Striga asiatica HOM05D006396 ORTHO05D008172 8.5e-50 201.4 198 56.1
PRCOL_00002489 Prasinoderma coloniale HOM05D006396 ORTHO05D008172 1.0e-47 194.5 196 50.5
Peaxi162Scf00818g00123 Petunia axillaris HOM05D006396 ORTHO05D008172 8.8e-47 191.4 110 85.5
AagrBONN_evm.TU.Sc2ySwM_368.425 Anthoceros agrestis HOM05D006396 ORTHO05D008172 7.5e-46 188.3 134 71.6
MCO04G060 Micromonas commoda HOM05D006396 ORTHO05D008172 4.1e-44 182.6 185 50.3
SEGI_35956 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 1.5e-41 174.1 110 72.7
Cre16.g662150 Chlamydomonas reinhardtii HOM05D006396 ORTHO05D008172 4.5e-35 152.5 188 43.6
FAN02G1480 Fragaria x ananassa HOM05D006396 ORTHO05D008172 2.9e-34 149.8 131 63.4
SEGI_37491 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 6.6e-26 122.1 82 74.4
BolC2t09342H Brassica oleracea HOM05D006396 ORTHO05D000401 6.6e-18 95.5 71 71.8
MD04G1090800 Malus domestica HOM05D006396 ORTHO05D008172 4.4e-14 82.8 49 79.6
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 5.8e-14 82.4 93 55.9
A02p34690 Brassica napus HOM05D006396 ORTHO05D008172 3.9e-10 69.7 44 75.0
Psat7g159680 Pisum sativum HOM05D006396 ORTHO05D008172 3.6e-08 63.2 44 61.4
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 4.7e-08 62.8 65 56.9


User provided reference genes

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