Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.16G131500 Glycine max HOM05D001705 ORTHO05D002725 2.2e-69 266.9 355 100.0
VMungo0251G2871 Vigna mungo HOM05D001705 ORTHO05D002725 6.4e-53 212.2 257 84.4
Phvul.003G258800 Phaseolus vulgaris HOM05D001705 ORTHO05D002725 2.0e-51 207.2 257 80.5
Sabra05G0096800 Salix brachista HOM05D001705 ORTHO05D002725 1.1e-33 148.3 256 76.2
GSVIVG01018835001 Vitis vinifera HOM05D001705 ORTHO05D002725 3.3e-33 146.7 256 77.3
Potri.007G016700 Populus trichocarpa HOM05D001705 ORTHO05D002725 1.6e-32 144.4 256 78.9
Rhsim08G0036100 Rhododendron simsii HOM05D001705 ORTHO05D002725 1.1e-31 141.7 254 72.0
Cfa006934 Carpinus fangiana HOM05D001705 ORTHO05D002725 1.8e-31 141.0 256 65.6
Sabra07G0013900 Salix brachista HOM05D001705 ORTHO05D002725 1.5e-30 137.9 256 78.1
Prupe.7G164400 Prunus persica HOM05D001705 ORTHO05D002725 4.9e-29 132.9 255 77.3
CSS0005183 Camellia sinensis var. sinensis HOM05D001705 ORTHO05D002725 6.4e-29 132.5 256 77.3
CiPaw.07G055300 Carya illinoinensis HOM05D001705 ORTHO05D002725 6.4e-29 132.5 256 77.0
Manes.01G142200 Manihot esculenta HOM05D001705 ORTHO05D002725 6.4e-29 132.5 255 78.0
TAR628G0632 Trochodendron aralioides HOM05D001705 ORTHO05D002725 2.4e-28 130.6 256 74.6
Duzib147G0685 Durio zibethinus HOM05D001705 ORTHO05D002725 3.9e-26 123.2 256 74.2
Thecc.01G024300 Theobroma cacao HOM05D001705 ORTHO05D002725 3.9e-26 123.2 256 75.0
Potri.005G117700 Populus trichocarpa HOM05D001705 ORTHO05D002725 5.1e-26 122.9 256 74.2
Cpa.g.sc6.205 Carica papaya HOM05D001705 ORTHO05D002725 6.6e-26 122.5 256 77.3
COL.COLO4_21972 Corchorus olitorius HOM05D001705 ORTHO05D002725 2.5e-25 120.6 256 75.8
Haze_03816 Corylus avellana HOM05D001705 ORTHO05D002725 5.6e-25 119.4 256 75.4
PGSC0003DMG400003544 Solanum tuberosum HOM05D001705 ORTHO05D002725 5.6e-25 119.4 256 74.6
Oeu005148.1 Olea europaea HOM05D001705 ORTHO05D002725 7.3e-25 119.0 256 73.4
Gohir.A12G061400 Gossypium hirsutum HOM05D001705 ORTHO05D002725 9.6e-25 118.6 256 65.6
EL10Ac6g14594 Beta vulgaris HOM05D001705 ORTHO05D002725 1.3e-24 118.2 256 74.6
Dinv40050 Davidia involucrata HOM05D001705 ORTHO05D002725 2.1e-24 117.5 199 64.3
Migut.H02487 Erythranthe guttata HOM05D001705 ORTHO05D002725 4.8e-24 116.3 256 70.7
Gorai.008G064700 Gossypium raimondii HOM05D001705 ORTHO05D002725 6.2e-24 115.9 256 65.2
Gohir.D12G061500 Gossypium hirsutum HOM05D001705 ORTHO05D002725 8.1e-24 115.5 256 65.2
Nn5g29193 Nelumbo nucifera HOM05D001705 ORTHO05D002725 8.1e-24 115.5 256 73.0
Aqoxy6G02406 Aquilegia oxysepala HOM05D001705 ORTHO05D002725 1.1e-23 115.2 252 73.4
MSTRG.2503 Avicennia marina HOM05D001705 ORTHO05D002725 1.1e-23 115.2 256 72.7
FvH4_1g12240 Fragaria vesca HOM05D001705 ORTHO05D002725 1.1e-23 115.2 255 53.7
FAN19G2547 Fragaria x ananassa HOM05D004495 ORTHO05D005361 3.1e-23 113.6 255 53.3
Eucgr.I02373 Eucalyptus grandis HOM05D001705 ORTHO05D002725 6.9e-23 112.5 256 73.4
Peaxi162Scf00083g01719 Petunia axillaris HOM05D001705 ORTHO05D002725 6.9e-23 112.5 256 74.2
MD02G1136300 Malus domestica HOM05D004495 ORTHO05D005361 1.2e-22 111.7 255 63.9
Nitab4.5_0002266g0090 Nicotiana tabacum HOM05D001705 ORTHO05D002725 1.5e-22 111.3 256 74.2
CAN.G358.8 Capsicum annuum HOM05D001705 ORTHO05D002725 2.6e-22 110.5 256 73.8
Sopen02g029270 Solanum pennellii HOM05D001705 ORTHO05D002725 3.4e-22 110.2 255 73.7
AUR62002982 Chenopodium quinoa HOM05D000312 ORTHO05D002725 5.8e-22 109.4 259 52.1
Nitab4.5_0004086g0010 Nicotiana tabacum HOM05D001705 ORTHO05D002725 1.3e-21 108.2 256 72.7
Sed0016929 Sechium edule HOM05D001705 ORTHO05D002725 1.3e-21 108.2 256 74.6
Peaxi162Scf00083g01720 Petunia axillaris HOM05D001705 ORTHO05D002725 3.8e-21 106.7 256 72.7
vmacro22099 Vaccinium macrocarpon HOM05D001705 ORTHO05D002725 6.4e-21 105.9 257 64.6
CsaV3_6G046840 Cucumis sativus L. HOM05D001705 ORTHO05D002725 8.4e-21 105.5 255 72.9
ClCG01G020070 Citrullus lanatus HOM05D001705 ORTHO05D002725 1.1e-20 105.1 255 60.8
TWI09G1571 Tripterygium wilfordii HOM05D001705 ORTHO05D002725 3.2e-20 103.6 256 53.5
AUR62007790 Chenopodium quinoa HOM05D001705 ORTHO05D002725 7.1e-20 102.4 255 59.6
Ah.02g124770 Amaranthus hybridus HOM05D001705 ORTHO05D002725 2.1e-19 100.9 256 50.8
EL10As8g23862 Beta vulgaris HOM05D001705 ORTHO05D002725 3.5e-19 100.1 256 60.9
Cc07_g10340 Coffea canephora HOM05D001705 ORTHO05D002725 3.5e-19 100.1 256 66.0
AUR62007789 Chenopodium quinoa HOM05D000312 ORTHO05D002725 6.0e-19 99.4 249 59.4
MELO3C007881.2 Cucumis melo HOM05D001705 ORTHO05D002725 7.9e-19 99.0 255 71.0
RcHm_v2.0_Chr2g0100021 Rosa chinensis HOM05D001705 ORTHO05D002725 8.7e-18 95.5 255 50.2
Ah.13g066700 Amaranthus hybridus HOM05D003705 ORTHO05D002725 1.9e-17 94.4 257 71.6
ATR0661G193 Amborella trichopoda HOM05D001705 ORTHO05D002725 3.3e-17 93.6 256 73.0
FAN28G1436 Fragaria x ananassa HOM05D001705 ORTHO05D002725 9.6e-17 92.0 255 48.6
PSO675G6176 Papaver somniferum HOM05D001705 ORTHO05D002725 1.6e-16 91.3 256 69.9
Lsat_1_v5_gn_3_75380 Lactuca sativa HOM05D001705 ORTHO05D002725 2.1e-16 90.9 257 56.0
SGA_v2.0_scaffold2G01238 Striga asiatica HOM05D001705 ORTHO05D002725 2.8e-16 90.5 151 67.5
AUR62003299 Chenopodium quinoa HOM05D002120 ORTHO05D002725 3.6e-16 90.1 258 65.1
Actinidia19236 Actinidia chinensis HOM05D001705 ORTHO05D002725 1.1e-15 88.6 68 64.7
ECA246G2311 Erigeron canadensis HOM05D000042 ORTHO05D000980 1.1e-15 88.6 256 58.2
FAN23G3072 Fragaria x ananassa HOM05D004495 ORTHO05D005361 1.1e-15 88.6 255 49.0
Solyc02g084600.4 Solanum lycopersicum HOM05D001705 ORTHO05D002725 1.1e-15 88.6 199 58.3
AUR62027162 Chenopodium quinoa HOM05D001705 ORTHO05D002725 1.4e-15 88.2 256 68.0
SalBow8G3503 Salvia bowleyana HOM05D001705 ORTHO05D002725 1.4e-15 88.2 255 68.6
SGA_v2.0_scaffold2G01235 Striga asiatica HOM05D002120 ORTHO05D002725 2.4e-15 87.4 155 69.0
Sc07g0007330 Simmondsia chinensis HOM05D001705 ORTHO05D002725 6.9e-15 85.9 250 49.2
PSO384G2660 Papaver somniferum HOM05D003705 ORTHO05D002725 9.0e-15 85.5 256 51.2
EL10Ac6g15676 Beta vulgaris HOM05D001705 ORTHO05D002725 2.0e-14 84.3 258 49.6
FAN26G1006 Fragaria x ananassa HOM05D001705 ORTHO05D002725 3.4e-14 83.6 255 47.8
HanXRQChr16g0530901 Helianthus annuus HOM05D001705 ORTHO05D002725 9.9e-14 82.0 257 56.8
Ah.02g125140 Amaranthus hybridus HOM05D001705 ORTHO05D002725 6.4e-13 79.3 258 67.8
AUR62027163 Chenopodium quinoa HOM05D001705 ORTHO05D002725 1.1e-12 78.6 140 72.1
PSO384G4644 Papaver somniferum HOM05D001705 ORTHO05D002725 1.1e-12 78.6 144 70.1
AUR62007657 Chenopodium quinoa HOM05D004495 ORTHO05D005361 1.4e-12 78.2 280 55.4
Hund14023 Selenicereus undatus HOM05D001705 ORTHO05D002725 4.2e-12 76.6 256 65.6
PSO384G1529 Papaver somniferum HOM05D000001 ORTHO05D002725 1.0e-10 72.0 258 46.5
PSO384G2367 Papaver somniferum HOM05D001705 ORTHO05D002725 1.3e-10 71.6 137 74.5
Ah.03g146170 Amaranthus hybridus HOM05D001705 ORTHO05D002725 1.8e-10 71.2 262 58.4
AUR62007788 Chenopodium quinoa HOM05D001705 ORTHO05D002725 3.9e-10 70.1 131 74.8
PSO541G4650 Papaver somniferum HOM05D001705 ORTHO05D002725 1.1e-09 68.6 146 34.2
PSO541G4589 Papaver somniferum HOM05D001705 ORTHO05D002725 2.5e-09 67.4 141 70.9
AUR62027161 Chenopodium quinoa HOM05D003705 ORTHO05D002725 3.3e-09 67.0 145 57.2
AUR62044398 Chenopodium quinoa HOM05D001705 ORTHO05D002725 3.3e-09 67.0 145 57.2
PSO675G4346 Papaver somniferum HOM05D001705 ORTHO05D010003 2.8e-08 63.9 141 69.5
TAR374G1085 Trochodendron aralioides HOM05D000071 ORTHO05D000029 9.0e-07 58.9 70 45.7
Ah.03g141660 Amaranthus hybridus HOM05D003705 ORTHO05D002725 1.5e-06 58.2 126 74.6
DCAR_029693 Daucus carota HOM05D000071 ORTHO05D000029 2.0e-06 57.8 68 47.1
EL10Ac9g20955 Beta vulgaris HOM05D001705 ORTHO05D001002 7.6e-06 55.8 127 73.2


User provided reference genes

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