Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.16G124800 Glycine max HOM05D007446 ORTHO05D009376 4.4e-43 177.6 89 100.0
Lj4g0002006 Lotus japonicus HOM05D007446 ORTHO05D009376 2.9e-31 138.3 87 80.5
Phvul.003G264800 Phaseolus vulgaris HOM05D007446 ORTHO05D009376 2.9e-31 138.3 91 80.2
Lalb_Chr05g0229761 Lupinus albus HOM05D007446 ORTHO05D009376 7.2e-30 133.7 84 78.6
ClCG01G020420 Citrullus lanatus HOM05D007446 ORTHO05D009376 4.7e-29 131.0 84 77.4
CsaV3_6G047300 Cucumis sativus L. HOM05D007446 ORTHO05D009376 6.1e-29 130.6 89 73.0
Rhsim10G0209600 Rhododendron simsii HOM05D007446 ORTHO05D009376 5.2e-28 127.5 84 77.4
arahy.Tifrunner.gnm1.ann1.786IJB Arachis hypogaea HOM05D007446 ORTHO05D009376 6.7e-28 127.1 84 78.6
arahy.Tifrunner.gnm1.ann1.RW313X Arachis hypogaea HOM05D007446 ORTHO05D009376 6.7e-28 127.1 84 78.6
TWI73G1016 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 6.7e-28 127.1 89 73.0
Actinidia17426 Actinidia chinensis HOM05D007446 ORTHO05D009376 8.8e-28 126.7 89 75.3
CiPaw.08G130000 Carya illinoinensis HOM05D007446 ORTHO05D009376 1.2e-27 126.3 89 76.4
Manes.02G106000 Manihot esculenta HOM05D007446 ORTHO05D009376 1.2e-27 126.3 89 74.2
Cfa006995 Carpinus fangiana HOM05D007446 ORTHO05D009376 1.5e-27 125.9 83 75.9
Haze_03737 Corylus avellana HOM05D007446 ORTHO05D009376 1.5e-27 125.9 83 75.9
GSVIVG01018747001 Vitis vinifera HOM05D007446 ORTHO05D009376 1.5e-27 125.9 81 77.8
vmacro22147 Vaccinium macrocarpon HOM05D007446 ORTHO05D009376 2.0e-27 125.6 83 77.1
Prupe.7G170900 Prunus persica HOM05D007446 ORTHO05D009376 2.6e-27 125.2 86 74.4
ECA232G4023 Erigeron canadensis HOM05D007446 ORTHO05D009376 4.4e-27 124.4 84 73.8
TWI09G0145 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 4.4e-27 124.4 89 73.0
HanXRQChr09g0256761 Helianthus annuus HOM05D007446 ORTHO05D009376 5.7e-27 124.0 84 72.6
Dinv40111 Davidia involucrata HOM05D007446 ORTHO05D009376 7.5e-27 123.6 78 78.2
MD02G1128000 Malus domestica HOM05D007446 ORTHO05D009376 2.2e-26 122.1 86 72.1
Sabra05G0091700 Salix brachista HOM05D007446 ORTHO05D009376 2.2e-26 122.1 89 74.2
EL10Ac6g15495 Beta vulgaris HOM05D007446 ORTHO05D009376 2.8e-26 121.7 89 73.0
Hund14058 Selenicereus undatus HOM05D007446 ORTHO05D009376 4.8e-26 120.9 84 71.4
Potri.005G111900 Populus trichocarpa HOM05D007446 ORTHO05D009376 6.3e-26 120.6 89 73.0
QL06p051006 Quercus lobata HOM05D007446 ORTHO05D009376 1.1e-25 119.8 78 75.6
Cpa.g.sc6.279 Carica papaya HOM05D007446 ORTHO05D009376 1.4e-25 119.4 88 72.7
AUR62003348 Chenopodium quinoa HOM05D007446 ORTHO05D009376 1.4e-25 119.4 89 73.0
Cc07_g11000 Coffea canephora HOM05D007446 ORTHO05D009376 1.4e-25 119.4 84 67.9
Atru.chr3.842 Acer truncatum HOM05D007446 ORTHO05D009376 1.8e-25 119.0 89 69.7
CSS0009543 Camellia sinensis var. sinensis HOM05D007446 ORTHO05D009376 1.8e-25 119.0 89 73.0
SalBow3G1068 Salvia bowleyana HOM05D007446 ORTHO05D009376 1.8e-25 119.0 84 69.0
Hma1.2p1_0869F.1_g230750 Hydrangea macrophylla HOM05D007446 ORTHO05D009376 3.1e-25 118.2 85 71.8
AUR62029488 Chenopodium quinoa HOM05D007446 ORTHO05D009376 4.1e-25 117.9 89 71.9
AUR62043833 Chenopodium quinoa HOM05D007446 ORTHO05D009376 4.1e-25 117.9 89 71.9
FvH4_1g11510 Fragaria vesca HOM05D007446 ORTHO05D009376 5.3e-25 117.5 81 71.6
RcHm_v2.0_Chr2g0099131 Rosa chinensis HOM05D007446 ORTHO05D009376 5.3e-25 117.5 81 71.6
Thecc.01G015400 Theobroma cacao HOM05D007446 ORTHO05D009376 5.3e-25 117.5 88 69.3
AT4G35980 Arabidopsis thaliana HOM05D007446 ORTHO05D009376 7.0e-25 117.1 84 71.4
Carub.0007s0425 Capsella rubella HOM05D007446 ORTHO05D009376 7.0e-25 117.1 90 71.1
Ah.03g149050 Amaranthus hybridus HOM05D007446 ORTHO05D009376 9.1e-25 116.7 84 71.4
Duzib264G0432 Durio zibethinus HOM05D007446 ORTHO05D009376 9.1e-25 116.7 81 75.3
AL7G15070 Arabidopsis lyrata HOM05D007446 ORTHO05D009376 1.6e-24 115.9 85 71.8
BraA01t00259Z Brassica rapa HOM05D007446 ORTHO05D009376 1.6e-24 115.9 85 70.6
FAN26G2670 Fragaria x ananassa HOM05D007446 ORTHO05D009376 2.0e-24 115.5 77 74.0
Gohir.D11G181100 Gossypium hirsutum HOM05D007446 ORTHO05D009376 2.0e-24 115.5 81 72.8
Gorai.007G193000 Gossypium raimondii HOM05D007446 ORTHO05D009376 2.0e-24 115.5 81 72.8
Eucgr.J02461 Eucalyptus grandis HOM05D007446 ORTHO05D009376 4.5e-24 114.4 89 68.5
Ciclev10026855m.g Citrus clementina HOM05D007446 ORTHO05D009376 5.9e-24 114.0 84 64.3
Medtr8g075290 Medicago truncatula HOM05D007446 ORTHO05D009376 7.7e-24 113.6 84 70.2
A01p02730 Brassica napus HOM05D007446 ORTHO05D009376 1.0e-23 113.2 85 69.4
BolC1t00289H Brassica oleracea HOM05D007446 ORTHO05D009376 1.0e-23 113.2 85 69.4
MELO3C007921.2 Cucumis melo HOM05D007446 ORTHO05D009376 1.0e-23 113.2 71 78.9
CAN.G1817.7 Capsicum annuum HOM05D007446 ORTHO05D009376 1.3e-23 112.8 83 66.3
PGR119G1403 Punica granatum HOM05D007446 ORTHO05D009376 1.3e-23 112.8 89 67.4
Aa31LG6G12930 Aethionema arabicum HOM05D007446 ORTHO05D009376 1.7e-23 112.5 90 68.9
BcaNung00774 Brassica carinata HOM05D007446 ORTHO05D009376 1.7e-23 112.5 85 69.4
CAN.G1274.24 Capsicum annuum HOM05D007446 ORTHO05D009376 1.7e-23 112.5 81 69.1
FAN23G0535 Fragaria x ananassa HOM05D000971 ORTHO05D000901 1.7e-23 112.5 80 68.8
Sp7g33750 Schrenkiella parvula HOM05D007446 ORTHO05D009376 1.7e-23 112.5 85 69.4
Thhalv10026680m.g Eutrema salsugineum HOM05D007446 ORTHO05D009376 2.2e-23 112.1 85 68.2
Glyma.02G046300 Glycine max HOM05D007446 ORTHO05D009376 2.2e-23 112.1 58 89.7
Peaxi162Scf00328g00716 Petunia axillaris HOM05D007446 ORTHO05D009376 2.2e-23 112.1 84 66.7
C01p03030 Brassica napus HOM05D007446 ORTHO05D009376 2.9e-23 111.7 85 68.2
THA.LOC104804270 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 1.1e-22 109.8 85 68.2
Sopen02g028430 Solanum pennellii HOM05D007446 ORTHO05D009376 1.5e-22 109.4 81 66.7
PGSC0003DMG400003579 Solanum tuberosum HOM05D007446 ORTHO05D009376 1.9e-22 109.0 81 66.7
CANSAT25G1207 Cannabis sativa HOM05D007446 ORTHO05D009376 4.2e-22 107.8 92 65.2
Sed0007439 Sechium edule HOM05D007446 ORTHO05D009376 4.2e-22 107.8 71 76.1
Psat4g101880 Pisum sativum HOM05D007446 ORTHO05D009376 9.4e-22 106.7 78 69.2
Solyc02g083650.3 Solanum lycopersicum HOM05D007446 ORTHO05D009376 1.2e-21 106.3 81 65.4
TPR.G19502 Trifolium pratense HOM05D007446 ORTHO05D009376 1.2e-21 106.3 79 70.9
Migut.H02175 Erythranthe guttata HOM05D007446 ORTHO05D009376 6.1e-21 104.0 84 66.7
Lsat_1_v5_gn_4_145721 Lactuca sativa HOM05D007446 ORTHO05D009376 6.1e-21 104.0 82 65.9
Psat4g101720 Pisum sativum HOM05D007446 ORTHO05D009376 1.0e-20 103.2 78 67.9
SGA_v2.0_scaffold74G24537 Striga asiatica HOM05D007446 ORTHO05D009376 1.0e-20 103.2 80 65.0
Nn7g37082 Nelumbo nucifera HOM05D007446 ORTHO05D009376 2.3e-20 102.1 84 64.3
TPR.G25793 Trifolium pratense HOM05D000002 ORTHO05D000001 1.5e-19 99.4 73 69.9
TAR636G2489 Trochodendron aralioides HOM05D007446 ORTHO05D009376 2.6e-19 98.6 82 61.0
unitig_899.g14718 Utricularia gibba HOM05D007446 ORTHO05D009376 7.5e-19 97.1 79 65.8
Nitab4.5_0001658g0040 Nicotiana tabacum HOM05D007446 ORTHO05D009376 9.8e-19 96.7 68 69.1
FAN19G2392 Fragaria x ananassa HOM05D000971 ORTHO05D000901 2.2e-18 95.5 69 68.1
THA.LOC109115992 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 2.2e-18 95.5 81 63.0
FAN28G0109 Fragaria x ananassa HOM05D000971 ORTHO05D000901 2.8e-18 95.1 71 66.2
Oeu007438.1 Olea europaea HOM05D007446 ORTHO05D009376 6.3e-18 94.0 63 74.6
Nitab4.5_0001892g0060 Nicotiana tabacum HOM05D007446 ORTHO05D009376 2.4e-17 92.0 68 66.2
MD15G1243200 Malus domestica HOM05D007446 ORTHO05D009376 3.1e-17 91.7 60 71.7
DCAR_023140 Daucus carota HOM05D000372 ORTHO05D004502 5.4e-17 90.9 77 66.2
Oeu054756.1 Olea europaea HOM05D007446 ORTHO05D009376 5.4e-17 90.9 61 73.8
Sc07g0001100 Simmondsia chinensis HOM05D007446 ORTHO05D009376 1.2e-16 89.7 73 64.4
Sc07g0001150 Simmondsia chinensis HOM05D007446 ORTHO05D009376 1.2e-16 89.7 73 65.8
Gorai.007G317400 Gossypium raimondii HOM05D007446 ORTHO05D009376 4.5e-16 87.8 73 65.8
Gohir.D11G294266 Gossypium hirsutum HOM05D007446 ORTHO05D009376 1.0e-15 86.7 76 61.8
DCAR_011601 Daucus carota HOM05D007446 ORTHO05D009376 1.7e-15 85.9 77 63.6
Gohir.A11G174000 Gossypium hirsutum HOM05D007446 ORTHO05D009376 3.8e-15 84.7 55 74.5
Os05g0352800 Oryza sativa ssp. japonica HOM05D007446 ORTHO05D009376 6.6e-15 84.0 76 59.2
ATR0681G038 Amborella trichopoda HOM05D007446 ORTHO05D009376 4.2e-14 81.3 78 55.1
HPP92_012021 Vanilla planifolia HOM05D007446 ORTHO05D009376 1.2e-13 79.7 84 51.2
PGSC0003DMG400022557 Solanum tuberosum HOM05D007446 ORTHO05D009376 1.8e-12 75.9 63 63.5
Psat0s2733g0120 Pisum sativum HOM05D007446 ORTHO05D009376 2.3e-12 75.5 85 50.6
Actinidia22956 Actinidia chinensis HOM05D007446 ORTHO05D009376 2.2e-10 68.9 44 81.8
SalBow3G4512 Salvia bowleyana HOM05D007446 ORTHO05D009376 2.2e-10 68.9 56 58.9
Mapoly0007s0006 Marchantia polymorpha HOM05D007446 ORTHO05D009376 9.2e-09 63.5 57 54.4
Pp3c23_18910 Physcomitrium patens HOM05D007446 ORTHO05D009376 1.2e-08 63.2 66 48.5
Zm00001eb428230 Zea mays HOM05D007446 ORTHO05D009376 2.3e-07 58.9 57 56.1
AagrBONN_evm.TU.Sc2ySwM_228.3577 Anthoceros agrestis HOM05D007446 ORTHO05D009376 1.9e-06 55.8 62 43.5


User provided reference genes

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