Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.16G123451 Glycine max HOM05D003331 ORTHO05D003264 3.6e-129 464.9 232 100.0
Glyma.02G045500 Glycine max HOM05D003331 ORTHO05D003264 2.3e-67 259.6 178 79.8
VMungo0251G3205 Vigna mungo HOM05D003331 ORTHO05D003264 2.5e-34 149.8 184 57.6
Phvul.003G266100 Phaseolus vulgaris HOM05D003331 ORTHO05D003264 7.4e-26 121.7 129 62.0
Medtr8g075130 Medicago truncatula HOM05D003331 ORTHO05D003264 1.4e-13 80.9 185 38.9
Solyc02g083520.2 Solanum lycopersicum HOM05D003331 ORTHO05D003264 1.4e-13 80.9 165 40.6
PGSC0003DMG400023897 Solanum tuberosum HOM05D003331 ORTHO05D003264 2.5e-13 80.1 147 41.5
Sopen02g028310 Solanum pennellii HOM05D003331 ORTHO05D003264 1.2e-12 77.8 190 37.4
CAN.G890.4 Capsicum annuum HOM05D003331 ORTHO05D003264 6.1e-12 75.5 153 38.6
HanXRQChr15g0487141 Helianthus annuus HOM05D003331 ORTHO05D003264 7.9e-12 75.1 185 35.7
Sopen02g012950 Solanum pennellii HOM05D003331 ORTHO05D003264 3.0e-11 73.2 158 39.9
Nitab4.5_0001789g0110 Nicotiana tabacum HOM05D003331 ORTHO05D003264 5.1e-11 72.4 167 37.1
HanXRQChr05g0133741 Helianthus annuus HOM05D003331 ORTHO05D003264 1.1e-10 71.2 165 37.0
Lalb_Chr16g0377411 Lupinus albus HOM05D003331 ORTHO05D003264 1.1e-10 71.2 164 39.6
CiPaw.08G127600 Carya illinoinensis HOM05D003331 ORTHO05D003264 1.5e-10 70.9 190 37.9
Hma1.2p1_0561F.1_g178920 Hydrangea macrophylla HOM05D003331 ORTHO05D003264 4.4e-10 69.3 147 38.1
Phvul.002G105700 Phaseolus vulgaris HOM05D003331 ORTHO05D003264 5.7e-10 68.9 140 39.3
Lj2g0025662 Lotus japonicus HOM05D003331 ORTHO05D003264 7.4e-10 68.6 189 36.5
Nn2g14480 Nelumbo nucifera HOM05D003331 ORTHO05D003264 7.4e-10 68.6 186 31.7
Potri.005G243400 Populus trichocarpa HOM05D003331 ORTHO05D003264 7.4e-10 68.6 183 35.5
CANSAT01G0941 Cannabis sativa HOM05D003331 ORTHO05D003264 1.3e-09 67.8 184 35.3
Oeu033812.1 Olea europaea HOM05D003331 ORTHO05D003264 2.8e-09 66.6 146 36.3
Duzib264G0309 Durio zibethinus HOM05D003331 ORTHO05D003264 3.7e-09 66.2 186 34.9
CAN.G225.18 Capsicum annuum HOM05D000004 ORTHO05D000002 8.2e-09 65.1 158 35.4
Manes.01G149900 Manihot esculenta HOM05D003331 ORTHO05D003264 8.2e-09 65.1 166 36.1
COL.COLO4_22478 Corchorus olitorius HOM05D003331 ORTHO05D003264 1.1e-08 64.7 155 37.4
Lsat_1_v5_gn_4_145080 Lactuca sativa HOM05D003331 ORTHO05D003264 1.4e-08 64.3 187 31.0
Lalb_Chr09g0321511 Lupinus albus HOM05D003331 ORTHO05D003264 1.4e-08 64.3 180 35.6
COL.COLO4_26108 Corchorus olitorius HOM05D003331 ORTHO05D003264 1.8e-08 63.9 163 36.8
Solyc02g061990.3 Solanum lycopersicum HOM05D003331 ORTHO05D003264 1.8e-08 63.9 150 36.7
Glyma.01G163500 Glycine max HOM05D003331 ORTHO05D003264 2.4e-08 63.5 158 33.5
Medtr5g022780 Medicago truncatula HOM05D003331 ORTHO05D003264 2.4e-08 63.5 187 32.6
Cfa007016 Carpinus fangiana HOM05D003331 ORTHO05D003264 3.1e-08 63.2 246 33.7
FAN23G2926 Fragaria x ananassa HOM05D003331 ORTHO05D003264 3.1e-08 63.2 229 31.0
Thecc.01G013300 Theobroma cacao HOM05D003331 ORTHO05D003264 3.1e-08 63.2 222 32.9
Actinidia17008 Actinidia chinensis HOM05D003331 ORTHO05D003264 4.1e-08 62.8 189 33.3
Oeu012566.1 Olea europaea HOM05D003331 ORTHO05D003264 5.3e-08 62.4 152 35.5
VMungo1215G2112 Vigna mungo HOM05D003331 ORTHO05D003264 5.3e-08 62.4 149 36.2
RcHm_v2.0_Chr2g0098731 Rosa chinensis HOM05D003331 ORTHO05D003264 7.0e-08 62.0 237 31.2
FvH4_1g11270 Fragaria vesca HOM05D003331 ORTHO05D003264 1.5e-07 60.8 206 31.6
GSVIVG01009970001 Vitis vinifera HOM05D003331 ORTHO05D003264 1.5e-07 60.8 157 37.6
Nitab4.5_0002337g0180 Nicotiana tabacum HOM05D003331 ORTHO05D003264 2.0e-07 60.5 171 35.1
Ah.03g143180 Amaranthus hybridus HOM05D000531 ORTHO05D003264 2.6e-07 60.1 158 36.1
Dinv08561 Davidia involucrata HOM05D003331 ORTHO05D003264 2.6e-07 60.1 176 35.8
Sp3g31180 Schrenkiella parvula HOM05D003331 ORTHO05D003264 3.4e-07 59.7 180 33.9
TAR625G0644 Trochodendron aralioides HOM05D003331 ORTHO05D003264 3.4e-07 59.7 171 35.1
FAN28G0558 Fragaria x ananassa HOM05D003331 ORTHO05D003264 5.9e-07 58.9 229 30.6
Peaxi162Scf00439g00042 Petunia axillaris HOM05D003331 ORTHO05D003264 7.7e-07 58.5 170 33.5
Potri.002G018400 Populus trichocarpa HOM05D003331 ORTHO05D003264 7.7e-07 58.5 160 34.4
CARHR108160 Cardamine hirsuta HOM05D003331 ORTHO05D003264 1.0e-06 58.2 155 37.4
FAN19G3075 Fragaria x ananassa HOM05D003331 ORTHO05D003264 1.0e-06 58.2 232 30.2
Nitab4.5_0000188g0190 Nicotiana tabacum HOM05D003331 ORTHO05D003264 1.0e-06 58.2 155 36.1
Sabra05G0089800 Salix brachista HOM05D003331 ORTHO05D003264 1.0e-06 58.2 258 29.1
A09p11560 Brassica napus HOM05D003331 ORTHO05D003264 1.3e-06 57.8 148 39.2
Duzib147G1072 Durio zibethinus HOM05D003331 ORTHO05D003264 1.3e-06 57.8 212 31.6
FAN20G2542 Fragaria x ananassa HOM05D003331 ORTHO05D003264 1.3e-06 57.8 175 33.1
Hma1.2p1_0315F.1_g122420 Hydrangea macrophylla HOM05D003331 ORTHO05D003264 1.3e-06 57.8 163 35.0
QL06p051331 Quercus lobata HOM05D003331 ORTHO05D003264 1.7e-06 57.4 210 31.0
Sed0019142 Sechium edule HOM05D003331 ORTHO05D003264 1.7e-06 57.4 127 37.0
FAN26G3159 Fragaria x ananassa HOM05D003331 ORTHO05D003264 2.2e-06 57.0 232 29.7
Potri.005G109500 Populus trichocarpa HOM05D003331 ORTHO05D003264 2.2e-06 57.0 207 29.5
Hund16511 Selenicereus undatus HOM05D003331 ORTHO05D003264 2.2e-06 57.0 186 33.9
Carub.0003s3191 Capsella rubella HOM05D003331 ORTHO05D003264 5.0e-06 55.8 194 31.4
MBI08_g06420_MAGBIO Magnolia biondii HOM05D003331 ORTHO05D003264 5.0e-06 55.8 229 31.4
BraA09t36802Z Brassica rapa HOM05D003331 ORTHO05D003264 6.5e-06 55.5 184 32.1
Thecc.08G048800 Theobroma cacao HOM05D003331 ORTHO05D003264 8.5e-06 55.1 180 32.8
TAR628G1529 Trochodendron aralioides HOM05D003331 ORTHO05D003264 8.5e-06 55.1 154 36.4


User provided reference genes

Program Settings