Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.16G108700 Glycine max HOM05D006782 ORTHO05D009662 3.1e-43 177.9 82 100.0
Glyma.16G108400 Glycine max HOM05D006782 ORTHO05D009662 7.6e-26 120.2 82 72.0
Glyma.16G108500 Glycine max HOM05D006782 ORTHO05D009662 6.4e-25 117.1 84 70.2
Medtr5g025730 Medicago truncatula HOM05D006782 ORTHO05D009662 2.0e-18 95.5 80 57.5
Phvul.002G122700 Phaseolus vulgaris HOM05D006782 ORTHO05D009662 2.2e-17 92.0 85 55.3
Phvul.003G278100 Phaseolus vulgaris HOM05D006782 ORTHO05D009662 2.2e-17 92.0 80 60.0
VMungo0251G3071 Vigna mungo HOM05D006782 ORTHO05D009662 6.5e-17 90.5 81 61.7
Lj4g0019286 Lotus japonicus HOM05D006782 ORTHO05D009662 7.1e-16 87.0 84 59.5
Medtr8g072170 Medicago truncatula HOM05D006782 ORTHO05D009662 6.0e-15 84.0 88 58.0
Glyma.09G218000 Glycine max HOM05D006782 ORTHO05D009662 1.3e-14 82.8 85 55.3
Lalb_Chr16g0380461 Lupinus albus HOM05D006782 ORTHO05D009662 7.4e-13 77.0 87 58.6
Glyma.01G152800 Glycine max HOM05D006782 ORTHO05D009662 2.1e-12 75.5 85 50.6
Lalb_Chr09g0325071 Lupinus albus HOM05D006782 ORTHO05D009662 1.4e-11 72.8 88 52.3
VMungo0251G1962 Vigna mungo HOM05D006782 ORTHO05D009662 1.4e-11 72.8 72 58.3
Lalb_Chr05g0215191 Lupinus albus HOM05D006782 ORTHO05D009662 2.4e-11 72.0 85 55.3
Atru.chr6.2152 Acer truncatum HOM05D006782 ORTHO05D009662 5.8e-10 67.4 89 49.4
arahy.Tifrunner.gnm1.ann1.06JDPW Arachis hypogaea HOM05D006782 ORTHO05D009662 1.3e-09 66.2 88 51.1
arahy.Tifrunner.gnm1.ann1.40LLJ4 Arachis hypogaea HOM05D006782 ORTHO05D009662 1.3e-09 66.2 88 51.1
Lj2g0009146 Lotus japonicus HOM05D006782 ORTHO05D009662 2.2e-09 65.5 86 47.7
QL12p003438 Quercus lobata HOM05D006782 ORTHO05D009662 3.2e-08 61.6 85 51.8
CiPaw.11G078800 Carya illinoinensis HOM05D006782 ORTHO05D009662 1.6e-07 59.3 89 44.9
Potri.004G234800 Populus trichocarpa HOM05D008950 ORTHO05D009662 1.3e-06 56.2 85 48.2
Ciclev10017790m.g Citrus clementina HOM05D006782 ORTHO05D009662 5.1e-06 54.3 85 47.1
Prupe.5G014000 Prunus persica HOM05D006782 ORTHO05D009662 8.7e-06 53.5 79 41.8


User provided reference genes

Program Settings