Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.16G104300 Glycine max HOM05D007523 ORTHO05D009520 2.9e-71 271.9 150 100.0
Phvul.003G279400 Phaseolus vulgaris HOM05D007523 ORTHO05D009520 5.2e-57 224.6 150 84.0
VMungo0251G0133 Vigna mungo HOM05D007523 ORTHO05D009520 3.5e-53 211.8 147 81.6
Lj4g0001215 Lotus japonicus HOM05D007523 ORTHO05D009520 1.9e-43 179.5 175 65.1
Lalb_Chr16g0392051 Lupinus albus HOM05D007523 ORTHO05D009520 1.6e-42 176.4 176 63.1
Psat4g110520 Pisum sativum HOM05D007523 ORTHO05D009520 9.3e-38 160.6 171 63.2
TPR.G31317 Trifolium pratense HOM05D007523 ORTHO05D009520 4.6e-37 158.3 176 59.7
Medtr8g071180 Medicago truncatula HOM05D007523 ORTHO05D009520 3.9e-36 155.2 176 59.1
Ca_22486_v3 Cicer arietinum L. HOM05D007523 ORTHO05D009520 1.5e-35 153.3 173 60.1
arahy.Tifrunner.gnm1.ann1.19GUIE Arachis hypogaea HOM05D007523 ORTHO05D009520 5.3e-33 144.8 169 58.0
arahy.Tifrunner.gnm1.ann1.7DC73F Arachis hypogaea HOM05D007523 ORTHO05D009520 5.3e-33 144.8 169 58.0
Aqoxy4G00046 Aquilegia oxysepala HOM05D007523 ORTHO05D009520 1.6e-29 133.3 158 58.2
TAR629G3055 Trochodendron aralioides HOM05D007523 ORTHO05D009520 2.1e-29 132.9 173 52.6
Haze_08076 Corylus avellana HOM05D007523 ORTHO05D009520 2.7e-29 132.5 174 53.4
Atru.chr6.1496 Acer truncatum HOM05D007523 ORTHO05D009520 7.9e-29 131.0 169 52.7
Manes.17G008000 Manihot esculenta HOM05D007523 ORTHO05D009520 7.9e-29 131.0 173 53.2
QL12p000900 Quercus lobata HOM05D007523 ORTHO05D009520 7.9e-29 131.0 172 51.7
Prupe.5G021500 Prunus persica HOM05D007523 ORTHO05D009520 1.0e-28 130.6 176 51.1
CSS0003197 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 1.3e-28 130.2 169 55.6
CSS0001694 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 3.9e-28 128.6 169 55.0
Potri.001G132400 Populus trichocarpa HOM05D007523 ORTHO05D009520 3.9e-28 128.6 175 50.9
Dinv28021 Davidia involucrata HOM05D007523 ORTHO05D009520 6.7e-28 127.9 149 56.4
Ah.12g055890 Amaranthus hybridus HOM05D002287 ORTHO05D002588 8.7e-28 127.5 127 64.6
Ciclev10002679m.g Citrus clementina HOM05D007523 ORTHO05D009520 2.5e-27 125.9 170 51.8
GSVIVG01026296001 Vitis vinifera HOM05D007523 ORTHO05D009520 4.3e-27 125.2 172 52.3
Sabra01G0102200 Salix brachista HOM05D007523 ORTHO05D009520 1.3e-26 123.6 173 50.3
Thecc.02G365300 Theobroma cacao HOM05D007523 ORTHO05D009520 2.1e-26 122.9 136 59.6
MD06G1014600 Malus domestica HOM05D007523 ORTHO05D009520 3.7e-26 122.1 175 49.7
Nn1g02124 Nelumbo nucifera HOM05D007523 ORTHO05D009520 6.2e-26 121.3 173 50.9
CANSAT21G1314 Cannabis sativa HOM05D007523 ORTHO05D009520 1.4e-25 120.2 176 51.7
CiPaw.11G102500 Carya illinoinensis HOM05D007523 ORTHO05D009520 1.8e-25 119.8 173 50.9
PSO675G0835 Papaver somniferum HOM05D007523 ORTHO05D009520 5.8e-24 114.8 133 57.9
PSO675G0851 Papaver somniferum HOM05D007523 ORTHO05D009520 5.8e-24 114.8 169 48.5
Thhalv10026426m.g Eutrema salsugineum HOM05D007523 ORTHO05D009520 3.8e-23 112.1 147 53.7
TWI34G1559 Tripterygium wilfordii HOM05D007523 ORTHO05D009520 6.5e-23 111.3 172 49.4
vmacro00070 Vaccinium macrocarpon HOM05D007523 ORTHO05D009520 8.4e-23 110.9 82 75.6
FAN04G1224 Fragaria x ananassa HOM05D007523 ORTHO05D009520 1.1e-22 110.5 168 48.8
Rhsim11G0026000 Rhododendron simsii HOM05D007523 ORTHO05D009520 1.9e-22 109.8 80 77.5
AT4G19070 Arabidopsis thaliana HOM05D007523 ORTHO05D009520 2.5e-22 109.4 148 55.4
PGR031G0795 Punica granatum HOM05D007523 ORTHO05D009520 2.5e-22 109.4 172 51.2
THA.LOC104811020 Tarenaya hassleriana HOM05D007523 ORTHO05D009520 3.2e-22 109.0 82 84.1
Duzib248G0934 Durio zibethinus HOM05D007523 ORTHO05D009520 4.2e-22 108.6 127 59.8
AL7G35030 Arabidopsis lyrata HOM05D007523 ORTHO05D009520 9.3e-22 107.5 148 54.7
RcHm_v2.0_Chr7g0213271 Rosa chinensis HOM05D007523 ORTHO05D009520 1.2e-21 107.1 173 47.4
FvH4_5g23880 Fragaria vesca HOM05D007523 ORTHO05D009520 1.6e-21 106.7 173 46.8
FAN18G0623 Fragaria x ananassa HOM05D007523 ORTHO05D009520 1.6e-21 106.7 173 46.8
FAN18G3486 Fragaria x ananassa HOM05D007523 ORTHO05D009520 1.6e-21 106.7 173 46.8
Gorai.008G189000 Gossypium raimondii HOM05D007523 ORTHO05D009520 2.7e-21 105.9 122 60.7
Sc22g0001970 Simmondsia chinensis HOM05D007523 ORTHO05D009520 2.7e-21 105.9 82 80.5
Carub.0007s2207 Capsella rubella HOM05D007523 ORTHO05D009520 3.5e-21 105.5 148 54.1
ATR1098G100 Amborella trichopoda HOM05D007523 ORTHO05D009520 4.6e-21 105.1 173 48.6
CARHR225970 Cardamine hirsuta HOM05D007523 ORTHO05D009520 4.6e-21 105.1 146 52.7
Nn3g19239 Nelumbo nucifera HOM05D007523 ORTHO05D009520 4.6e-21 105.1 173 47.4
HanXRQChr03g0082201 Helianthus annuus HOM05D007523 ORTHO05D009520 6.0e-21 104.8 82 80.5
SalBow4G0950 Salvia bowleyana HOM05D007523 ORTHO05D009520 6.0e-21 104.8 81 77.8
Sp7g17790 Schrenkiella parvula HOM05D007523 ORTHO05D005023 6.0e-21 104.8 147 51.7
Cc08_g04400 Coffea canephora HOM05D007523 ORTHO05D009520 7.9e-21 104.4 173 43.4
Eucgr.D02602 Eucalyptus grandis HOM05D007523 ORTHO05D009520 1.0e-20 104.0 173 50.9
Gohir.D12G176600 Gossypium hirsutum HOM05D007523 ORTHO05D009520 1.0e-20 104.0 122 59.8
CDE05G0732 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 1.3e-20 103.6 169 46.7
AUR62027336 Chenopodium quinoa HOM05D007523 ORTHO05D009520 1.3e-20 103.6 128 59.4
Gohir.A12G173966 Gossypium hirsutum HOM05D007523 ORTHO05D009520 1.3e-20 103.6 122 59.8
C07p50210 Brassica napus HOM05D000137 ORTHO05D002305 1.8e-20 103.2 82 76.8
SGA_v2.0_scaffold96G29060 Striga asiatica HOM05D007523 ORTHO05D009520 1.8e-20 103.2 80 77.5
BcaC06g30615 Brassica carinata HOM05D007523 ORTHO05D009520 3.0e-20 102.4 82 76.8
BcaNung03083 Brassica carinata HOM05D007523 ORTHO05D009520 3.0e-20 102.4 82 76.8
A03p51710 Brassica napus HOM05D000137 ORTHO05D002305 3.0e-20 102.4 82 76.8
BolC7t45523H Brassica oleracea HOM05D007523 ORTHO05D009520 3.0e-20 102.4 82 76.8
BraA03t14258Z Brassica rapa HOM05D000452 ORTHO05D000647 3.0e-20 102.4 82 76.8
Aa31LG6G1770 Aethionema arabicum HOM05D007523 ORTHO05D005023 3.9e-20 102.1 82 76.8
EL10Ac5g11951 Beta vulgaris HOM05D007523 ORTHO05D009520 8.7e-20 100.9 78 83.3
ECA240G1522 Erigeron canadensis HOM05D007523 ORTHO05D009520 1.1e-19 100.5 80 78.8
Oeu017333.1 Olea europaea HOM05D007523 ORTHO05D009520 1.1e-19 100.5 82 76.8
Sed0002333 Sechium edule HOM05D007523 ORTHO05D009520 2.5e-19 99.4 175 46.9
ClCG07G002350 Citrullus lanatus HOM05D007523 ORTHO05D009520 3.3e-19 99.0 174 48.3
MSTRG.1775 Avicennia marina HOM05D007523 ORTHO05D009520 4.3e-19 98.6 79 78.5
Cpa.g.sc355.1 Carica papaya HOM05D007523 ORTHO05D009520 5.7e-19 98.2 83 75.9
Migut.E01344 Erythranthe guttata HOM05D007523 ORTHO05D009520 5.7e-19 98.2 80 73.8
AUR62007395 Chenopodium quinoa HOM05D002287 ORTHO05D009520 1.3e-18 97.1 78 80.8
Peaxi162Scf00876g00434 Petunia axillaris HOM05D007523 ORTHO05D009520 1.3e-18 97.1 80 73.8
PGSC0003DMG400029292 Solanum tuberosum HOM05D007523 ORTHO05D009520 1.3e-18 97.1 80 77.5
SalBow8G2402 Salvia bowleyana HOM05D007523 ORTHO05D009520 1.6e-18 96.7 82 76.8
CsaV3_3G030330 Cucumis sativus L. HOM05D007523 ORTHO05D009520 2.8e-18 95.9 82 74.4
Solyc12g096090.2 Solanum lycopersicum HOM05D007523 ORTHO05D009520 1.1e-17 94.0 80 76.2
Sopen12g031980 Solanum pennellii HOM05D007523 ORTHO05D009520 1.1e-17 94.0 80 76.2
Migut.A00547 Erythranthe guttata HOM05D007523 ORTHO05D009520 1.8e-17 93.2 80 65.0
Os07g0143600 Oryza sativa ssp. japonica HOM05D007523 ORTHO05D009520 4.1e-17 92.0 89 68.5
unitig_0.g2217 Utricularia gibba HOM05D007523 ORTHO05D009520 5.3e-17 91.7 76 75.0
Nitab4.5_0006741g0030 Nicotiana tabacum HOM05D007523 ORTHO05D009520 9.0e-17 90.9 80 73.8
Nitab4.5_0000943g0130 Nicotiana tabacum HOM05D007523 ORTHO05D009520 1.5e-16 90.1 80 72.5
CAN.G947.41 Capsicum annuum HOM05D007523 ORTHO05D009520 2.0e-16 89.7 80 72.5
HPP92_012195 Vanilla planifolia HOM05D007523 ORTHO05D009520 2.0e-16 89.7 80 73.8
Mapoly0024s0063 Marchantia polymorpha HOM05D007523 ORTHO05D009520 4.5e-16 88.6 86 67.4
MBI18_g28211_MAGBIO Magnolia biondii HOM05D007523 ORTHO05D009520 2.9e-15 85.9 158 44.9
MSTRG.11889 Avicennia marina HOM05D007523 ORTHO05D009520 1.9e-14 83.2 81 70.4
AagrBONN_evm.TU.Sc2ySwM_368.2556 Anthoceros agrestis HOM05D007523 ORTHO05D009520 5.5e-14 81.6 72 69.4
Peaxi162Scf00972g00043 Petunia axillaris HOM05D007523 ORTHO05D009520 7.2e-14 81.3 72 73.6
Actinidia04633 Actinidia chinensis HOM05D007523 ORTHO05D009520 1.6e-13 80.1 150 44.7
Pp3c19_7810 Physcomitrium patens HOM05D007523 ORTHO05D009520 6.1e-13 78.2 86 61.6
SMO353G0121 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 6.7e-12 74.7 87 62.1
Mapoly0010s0014 Marchantia polymorpha HOM05D007523 ORTHO05D009520 8.8e-12 74.3 70 72.9
SMO364G0280 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 7.4e-11 71.2 71 70.4
AUR62044264 Chenopodium quinoa HOM05D007523 ORTHO05D009520 1.7e-07 60.1 109 52.3
COL.COLO4_11248 Corchorus olitorius HOM05D007523 ORTHO05D009520 4.2e-06 55.5 55 76.4


User provided reference genes

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