Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.16G103000 Glycine max HOM05D007271 ORTHO05D009217 0.0e+00 1201.8 614 100.0
Phvul.003G273200 Phaseolus vulgaris HOM05D007271 ORTHO05D009217 2.1e-213 746.1 521 74.9
VMungo0251G3497 Vigna mungo HOM05D007271 ORTHO05D009217 2.2e-210 736.1 538 72.1
Lalb_Chr05g0215551 Lupinus albus HOM05D007271 ORTHO05D009217 6.6e-191 671.4 546 63.4
VMungo1215G2496 Vigna mungo HOM05D007271 ORTHO05D009217 1.2e-187 660.6 544 63.8
Glyma.01G009700 Glycine max HOM05D007271 ORTHO05D009217 1.6e-184 650.2 547 63.8
Lj4g0015364 Lotus japonicus HOM05D007271 ORTHO05D009217 4.8e-181 638.6 539 63.3
Ca_25147_v3 Cicer arietinum L. HOM05D007271 ORTHO05D009217 5.3e-180 635.2 543 60.6
Lj2g0009393 Lotus japonicus HOM05D007271 ORTHO05D009217 7.1e-177 624.8 549 60.7
Medtr5g027460 Medicago truncatula HOM05D007271 ORTHO05D009217 2.1e-176 623.2 556 59.2
Psat2g139720 Pisum sativum HOM05D007271 ORTHO05D009217 1.1e-174 617.5 510 61.8
Psat4g109960 Pisum sativum HOM05D007271 ORTHO05D009217 2.8e-173 612.8 534 60.5
Medtr8g071050 Medicago truncatula HOM05D007271 ORTHO05D009217 3.4e-171 605.9 510 62.2
arahy.Tifrunner.gnm1.ann1.3Y0Q41 Arachis hypogaea HOM05D007271 ORTHO05D009217 1.4e-169 600.5 507 61.7
TPR.G28964 Trifolium pratense HOM05D007271 ORTHO05D009217 3.3e-166 589.3 509 61.7
Phvul.002G132600 Phaseolus vulgaris HOM05D007271 ORTHO05D009217 2.8e-165 586.3 452 65.9
arahy.Tifrunner.gnm1.ann1.CI81A0 Arachis hypogaea HOM05D007271 ORTHO05D009217 4.0e-164 582.4 525 59.6
CiPaw.12G070300 Carya illinoinensis HOM05D007271 ORTHO05D009217 6.5e-146 521.9 520 53.3
Dinv29036 Davidia involucrata HOM05D007271 ORTHO05D009217 3.9e-143 512.7 487 54.8
Haze_08102 Corylus avellana HOM05D007271 ORTHO05D009217 4.5e-139 499.2 506 52.4
Eucgr.E01257 Eucalyptus grandis HOM05D007271 ORTHO05D009217 7.7e-139 498.4 496 52.6
Cfa012560 Carpinus fangiana HOM05D007271 ORTHO05D009217 5.5e-137 492.3 506 51.2
Hma1.2p1_0635F.1_g193160 Hydrangea macrophylla HOM05D007271 ORTHO05D009217 7.2e-137 491.9 483 53.0
Prupe.5G024200 Prunus persica HOM05D007271 ORTHO05D009217 1.2e-136 491.1 497 52.3
Oeu061071.1 Olea europaea HOM05D007271 ORTHO05D009217 3.0e-135 486.5 525 50.3
GSVIVG01026362001 Vitis vinifera HOM05D007271 ORTHO05D009217 3.0e-135 486.5 498 51.8
Eucgr.D02621 Eucalyptus grandis HOM05D007271 ORTHO05D009217 3.9e-135 486.1 487 51.5
Peaxi162Scf00185g01619 Petunia axillaris HOM05D007271 ORTHO05D009217 8.8e-135 485.0 513 49.7
Nitab4.5_0005761g0060 Nicotiana tabacum HOM05D007271 ORTHO05D009217 9.7e-134 481.5 499 49.9
PGSC0003DMG400035874 Solanum tuberosum HOM05D007271 ORTHO05D009217 1.3e-133 481.1 500 51.2
CAN.G773.8 Capsicum annuum HOM05D007271 ORTHO05D009217 2.2e-133 480.3 490 51.0
TAR375G0504 Trochodendron aralioides HOM05D007271 ORTHO05D009217 4.8e-133 479.2 519 49.1
PGR042G3154 Punica granatum HOM05D007271 ORTHO05D009217 2.4e-132 476.9 511 48.9
Potri.001G133700 Populus trichocarpa HOM05D007271 ORTHO05D009217 3.1e-132 476.5 484 51.2
Nitab4.5_0000109g0130 Nicotiana tabacum HOM05D007271 ORTHO05D009217 4.1e-132 476.1 507 49.3
Cpa.g.sc104.82 Carica papaya HOM05D007271 ORTHO05D009217 7.0e-132 475.3 491 49.7
FAN13G0287 Fragaria x ananassa HOM05D007271 ORTHO05D009217 9.1e-132 474.9 497 51.5
Solyc08g076040.2 Solanum lycopersicum HOM05D007271 ORTHO05D009217 2.0e-131 473.8 499 50.1
FvH4_5g23600 Fragaria vesca HOM05D007271 ORTHO05D009217 3.5e-131 473.0 487 51.7
Sopen08g024690 Solanum pennellii HOM05D007271 ORTHO05D009217 3.5e-131 473.0 499 50.1
FAN08G2102 Fragaria x ananassa HOM05D007271 ORTHO05D009217 5.9e-131 472.2 497 51.3
DCAR_008194 Daucus carota HOM05D007271 ORTHO05D009217 1.0e-130 471.5 498 49.4
Duzib068G0217 Durio zibethinus HOM05D007271 ORTHO05D009217 2.2e-130 470.3 510 49.6
Peaxi162Scf00408g00227 Petunia axillaris HOM05D007271 ORTHO05D009217 2.2e-130 470.3 478 51.7
Ciclev10003885m.g Citrus clementina HOM05D007271 ORTHO05D009217 2.9e-130 469.9 513 49.3
FAN18G2511 Fragaria x ananassa HOM05D007271 ORTHO05D009217 3.8e-130 469.5 562 47.5
RcHm_v2.0_Chr7g0212901 Rosa chinensis HOM05D007271 ORTHO05D009217 1.1e-129 468.0 495 51.3
Manes.17G011200 Manihot esculenta HOM05D007271 ORTHO05D009217 5.5e-129 465.7 528 48.3
MD00G1000300 Malus domestica HOM05D007271 ORTHO05D009217 7.2e-129 465.3 500 48.8
TWI14G0446 Tripterygium wilfordii HOM05D007271 ORTHO05D009217 2.1e-128 463.8 521 46.8
Lj8A323T49 Lonicera japonica HOM05D007271 ORTHO05D009217 3.6e-128 463.0 487 49.5
HanXRQChr17g0537681 Helianthus annuus HOM05D007271 ORTHO05D009217 6.1e-128 462.2 501 50.5
FAN18G2097 Fragaria x ananassa HOM05D007271 ORTHO05D009217 1.4e-127 461.1 562 46.8
Thecc.03G314300 Theobroma cacao HOM05D007271 ORTHO05D009217 2.3e-127 460.3 507 48.9
Atru.chr6.1575 Acer truncatum HOM05D007271 ORTHO05D009217 6.8e-127 458.8 501 47.7
Aqoxy7G00878 Aquilegia oxysepala HOM05D007271 ORTHO05D009217 2.2e-125 453.8 497 47.5
Gohir.A12G204300 Gossypium hirsutum HOM05D007271 ORTHO05D009217 2.2e-125 453.8 487 49.5
Oeu001193.1 Olea europaea HOM05D007271 ORTHO05D009217 3.7e-125 453.0 487 49.3
CANSAT21G2130 Cannabis sativa HOM05D007271 ORTHO05D009217 1.1e-124 451.4 497 49.5
Lsat_1_v5_gn_3_20940 Lactuca sativa HOM05D007271 ORTHO05D009217 2.4e-124 450.3 515 48.2
Gorai.008G222100 Gossypium raimondii HOM05D007271 ORTHO05D009217 3.1e-124 449.9 487 49.7
Gohir.D12G206700 Gossypium hirsutum HOM05D007271 ORTHO05D009217 5.3e-124 449.1 487 49.5
MBI04_g36029_MAGBIO Magnolia biondii HOM05D007271 ORTHO05D009217 4.5e-123 446.0 487 47.4
Cc08_g04070 Coffea canephora HOM05D007271 ORTHO05D009217 1.0e-122 444.9 488 46.9
DCAR_004256 Daucus carota HOM05D007271 ORTHO05D009217 1.3e-122 444.5 500 48.0
Gorai.004G180600 Gossypium raimondii HOM05D007271 ORTHO05D009217 5.0e-122 442.6 492 48.0
SalBow4G2871 Salvia bowleyana HOM05D007271 ORTHO05D009217 6.5e-122 442.2 528 45.8
ClCG10G001150 Citrullus lanatus HOM05D007271 ORTHO05D009217 1.9e-121 440.7 492 48.6
Gohir.D08G173300 Gossypium hirsutum HOM05D007271 ORTHO05D009217 2.5e-121 440.3 487 48.0
QL12p000436 Quercus lobata HOM05D007271 ORTHO05D009217 2.7e-120 436.8 409 55.3
SalBow8G4630 Salvia bowleyana HOM05D007271 ORTHO05D009217 2.7e-120 436.8 544 44.9
MELO3C013807.2 Cucumis melo HOM05D007271 ORTHO05D009217 2.0e-118 430.6 524 46.6
PGR031G3520 Punica granatum HOM05D007271 ORTHO05D009217 5.7e-118 429.1 496 48.0
Gohir.A08G152200 Gossypium hirsutum HOM05D007271 ORTHO05D009217 7.0e-116 422.2 492 46.1
Actinidia14763 Actinidia chinensis HOM05D007271 ORTHO05D009217 5.0e-114 416.0 524 46.2
CsaV3_3G001170 Cucumis sativus L. HOM05D007271 ORTHO05D009217 2.5e-113 413.7 524 45.6
Hma1.2p1_1486F.1_g286550 Hydrangea macrophylla HOM05D007271 ORTHO05D009217 4.2e-113 412.9 409 53.3
Sed0019673 Sechium edule HOM05D007271 ORTHO05D009217 1.2e-112 411.4 493 48.5
unitig_748.g8136 Utricularia gibba HOM05D007271 ORTHO05D009217 4.5e-107 392.9 514 43.2
Zm00001eb268890 Zea mays HOM05D007271 ORTHO05D009217 1.4e-103 381.3 472 43.6
Os06g0113900 Oryza sativa ssp. japonica HOM05D007271 ORTHO05D009217 1.8e-103 380.9 472 43.9
unitig_747.g21928 Utricularia gibba HOM05D007271 ORTHO05D009217 2.3e-103 380.6 492 42.9
PSO717G0049 Papaver somniferum HOM05D007271 ORTHO05D009217 3.4e-102 376.7 490 42.9
ECA246G0509 Erigeron canadensis HOM05D007271 ORTHO05D009217 6.0e-99 365.9 515 41.4
Migut.A00579 Erythranthe guttata HOM05D007271 ORTHO05D009217 2.0e-86 324.3 487 39.0
Nitab4.5_0000809g0020 Nicotiana tabacum HOM05D007271 ORTHO05D009217 1.7e-85 321.2 367 49.3
FAN04G0635 Fragaria x ananassa HOM05D007271 ORTHO05D009217 6.6e-74 282.7 415 42.7
ATR0829G091 Amborella trichopoda HOM05D007271 ORTHO05D009217 1.6e-72 278.1 388 40.7
SEGI_35026 Sequoiadendron giganteum HOM05D007271 ORTHO05D009217 7.9e-59 232.6 481 30.8
unitig_32.g10968 Utricularia gibba HOM05D007271 ORTHO05D009217 1.3e-53 215.3 411 33.8
TPR.G9088 Trifolium pratense HOM05D007271 ORTHO05D009217 1.9e-52 211.5 175 62.3
Ciclev10003404m.g Citrus clementina HOM05D007271 ORTHO05D009217 2.1e-51 208.0 487 32.2
HanXRQChr06g0172981 Helianthus annuus HOM05D007271 ORTHO05D009217 6.0e-51 206.5 182 51.1
HanXRQChr06g0172971 Helianthus annuus HOM05D007271 ORTHO05D009217 6.9e-39 166.4 183 52.5
TPR.G34495 Trifolium pratense HOM05D007271 ORTHO05D009217 1.1e-33 149.1 109 63.3
Ca_22492_v3 Cicer arietinum L. HOM05D007271 ORTHO05D009217 4.8e-32 143.7 130 60.0
TPR.G9092 Trifolium pratense HOM05D007271 ORTHO05D009217 5.5e-28 130.2 110 60.0
TPR.G8637 Trifolium pratense HOM05D007271 ORTHO05D009217 6.5e-21 106.7 101 55.4
arahy.Tifrunner.gnm1.ann1.RGNF9W Arachis hypogaea HOM05D007271 ORTHO05D009217 8.0e-19 99.8 135 43.0
arahy.Tifrunner.gnm1.ann1.WVYD0V Arachis hypogaea HOM05D007271 ORTHO05D009217 8.0e-19 99.8 135 43.0
COL.COLO4_16884 Corchorus olitorius HOM05D007271 ORTHO05D009217 1.1e-17 95.9 83 54.2
Oeu061072.1 Olea europaea HOM05D007271 ORTHO05D009217 1.1e-15 89.4 86 41.9
COL.COLO4_16886 Corchorus olitorius HOM05D007271 ORTHO05D009217 6.8e-10 70.1 83 39.8
QL12p000442 Quercus lobata HOM05D007271 ORTHO05D009217 6.8e-10 70.1 110 39.1
PSO675G5865 Papaver somniferum HOM05D007271 ORTHO05D009217 4.1e-07 60.8 114 30.7


User provided reference genes

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