Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.16G101900 Glycine max HOM05D005529 ORTHO05D006800 3.9e-37 157.5 75 100.0
Glyma.10G219900 Glycine max HOM05D005529 ORTHO05D006800 1.3e-16 89.4 60 76.7
Phvul.007G085400 Phaseolus vulgaris HOM05D005529 ORTHO05D006800 1.3e-16 89.4 60 76.7
CiPaw.16G006900 Carya illinoinensis HOM05D005529 ORTHO05D006800 3.8e-16 87.8 60 73.3
arahy.Tifrunner.gnm1.ann1.MD2PB3 Arachis hypogaea HOM05D005529 ORTHO05D006800 5.0e-16 87.4 60 73.3
arahy.Tifrunner.gnm1.ann1.PZ5J07 Arachis hypogaea HOM05D005529 ORTHO05D006800 5.0e-16 87.4 60 73.3
Cc10_g06360 Coffea canephora HOM05D005529 ORTHO05D006800 5.0e-16 87.4 60 73.3
Glyma.20G171766 Glycine max HOM05D005529 ORTHO05D006800 8.5e-16 86.7 60 75.0
Glyma.20G171800 Glycine max HOM05D005529 ORTHO05D006800 8.5e-16 86.7 60 75.0
Psat6g189800 Pisum sativum HOM05D005529 ORTHO05D006800 1.1e-15 86.3 60 73.3
PGR042G1245 Punica granatum HOM05D005529 ORTHO05D006800 1.5e-15 85.9 60 71.7
Medtr1g097380 Medicago truncatula HOM05D005529 ORTHO05D006800 1.9e-15 85.5 60 73.3
TPR.G23153 Trifolium pratense HOM05D005529 ORTHO05D006800 1.9e-15 85.5 60 73.3
VMungo0720G3143 Vigna mungo HOM05D005529 ORTHO05D006800 1.9e-15 85.5 71 66.2
Atru.chr13.1964 Acer truncatum HOM05D005529 ORTHO05D006800 7.2e-15 83.6 60 71.7
Actinidia02780 Actinidia chinensis HOM05D005529 ORTHO05D006800 7.2e-15 83.6 60 71.7
Actinidia15622 Actinidia chinensis HOM05D005529 ORTHO05D006800 7.2e-15 83.6 60 71.7
Dinv41017 Davidia involucrata HOM05D005529 ORTHO05D006800 9.4e-15 83.2 60 71.7
Nitab4.5_0004541g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 9.4e-15 83.2 60 71.7
CiPaw.15G011100 Carya illinoinensis HOM05D005529 ORTHO05D006800 1.2e-14 82.8 60 70.0
Lj4A706T78 Lonicera japonica HOM05D005529 ORTHO05D006800 1.2e-14 82.8 58 72.4
CSS0031927 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 1.6e-14 82.4 60 70.0
CSS0035962 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 1.6e-14 82.4 60 70.0
SalBow7G1408 Salvia bowleyana HOM05D005529 ORTHO05D006800 1.6e-14 82.4 71 60.6
Lalb_Chr06g0161811 Lupinus albus HOM05D005529 ORTHO05D006800 2.1e-14 82.0 60 70.0
Migut.C00162 Erythranthe guttata HOM05D005529 ORTHO05D006800 2.7e-14 81.6 60 70.0
Migut.O00737 Erythranthe guttata HOM05D005529 ORTHO05D006800 2.7e-14 81.6 60 70.0
Dinv13098 Davidia involucrata HOM05D005529 ORTHO05D006800 3.6e-14 81.3 60 70.0
Oeu027223.1 Olea europaea HOM05D005529 ORTHO05D006800 4.7e-14 80.9 60 70.0
MSTRG.965 Avicennia marina HOM05D005529 ORTHO05D006800 6.1e-14 80.5 60 70.0
ClCG08G007150 Citrullus lanatus HOM05D005529 ORTHO05D006800 6.1e-14 80.5 60 68.3
MELO3C019956.2 Cucumis melo HOM05D005529 ORTHO05D006800 6.1e-14 80.5 60 68.3
Duzib093G1833 Durio zibethinus HOM05D005529 ORTHO05D006800 6.1e-14 80.5 61 65.6
Lj5g0011658 Lotus japonicus HOM05D005529 ORTHO05D006800 6.1e-14 80.5 60 70.0
Aqoxy6G00458 Aquilegia oxysepala HOM05D005529 ORTHO05D006800 8.0e-14 80.1 60 70.0
CANSAT25G1808 Cannabis sativa HOM05D005529 ORTHO05D006800 8.0e-14 80.1 60 70.0
DCAR_019977 Daucus carota HOM05D005529 ORTHO05D006800 8.0e-14 80.1 60 66.7
Peaxi162Scf00160g01637 Petunia axillaris HOM05D005529 ORTHO05D006800 8.0e-14 80.1 60 70.0
Solyc12g056770.3 Solanum lycopersicum HOM05D005529 ORTHO05D006800 8.0e-14 80.1 60 70.0
Sopen12g029450 Solanum pennellii HOM05D005529 ORTHO05D006800 8.0e-14 80.1 60 70.0
PGSC0003DMG400016963 Solanum tuberosum HOM05D005529 ORTHO05D006800 8.0e-14 80.1 60 70.0
CsaV3_6G004830 Cucumis sativus L. HOM05D005529 ORTHO05D006800 1.0e-13 79.7 60 66.7
ECA232G2783 Erigeron canadensis HOM05D005529 ORTHO05D006800 1.0e-13 79.7 60 68.3
Prupe.8G045100 Prunus persica HOM05D005529 ORTHO05D006800 1.0e-13 79.7 60 70.0
Sed0025527 Sechium edule HOM05D005529 ORTHO05D006800 1.0e-13 79.7 60 66.7
THA.LOC104800098 Tarenaya hassleriana HOM05D005529 ORTHO05D006800 1.4e-13 79.3 58 70.7
Manes.02G186100 Manihot esculenta HOM05D005529 ORTHO05D006800 1.8e-13 79.0 60 66.7
COL.COLO4_05242 Corchorus olitorius HOM05D005529 ORTHO05D006800 3.0e-13 78.2 60 66.7
Haze_17835 Corylus avellana HOM05D005529 ORTHO05D006800 3.0e-13 78.2 60 68.3
Haze_17841 Corylus avellana HOM05D005529 ORTHO05D006800 3.0e-13 78.2 60 68.3
QL02p036323 Quercus lobata HOM05D005529 ORTHO05D006800 3.0e-13 78.2 60 68.3
QL02p036742 Quercus lobata HOM05D005529 ORTHO05D006800 3.0e-13 78.2 60 68.3
GSVIVG01013675001 Vitis vinifera HOM05D005529 ORTHO05D006800 3.0e-13 78.2 60 68.3
Eucgr.F02670 Eucalyptus grandis HOM05D005529 ORTHO05D006800 4.0e-13 77.8 60 66.7
Rhsim06G0089200 Rhododendron simsii HOM05D005529 ORTHO05D006800 4.0e-13 77.8 60 66.7
SGA_v2.0_scaffold161G37858 Striga asiatica HOM05D005529 ORTHO05D006800 4.0e-13 77.8 60 66.7
TAR625G0192 Trochodendron aralioides HOM05D005529 ORTHO05D006800 4.0e-13 77.8 58 69.0
FvH4_2g12750 Fragaria vesca HOM05D005529 ORTHO05D006800 5.2e-13 77.4 71 59.2
FAN15G0152 Fragaria x ananassa HOM05D005529 ORTHO05D006800 5.2e-13 77.4 71 59.2
FAN24G1078 Fragaria x ananassa HOM05D005529 ORTHO05D006800 5.2e-13 77.4 71 59.2
FAN27G2439 Fragaria x ananassa HOM05D005529 ORTHO05D006800 5.2e-13 77.4 71 59.2
HanXRQChr11g0320531 Helianthus annuus HOM05D005529 ORTHO05D006800 5.2e-13 77.4 60 68.3
MD05G1037000 Malus domestica HOM05D005529 ORTHO05D006800 5.2e-13 77.4 60 66.7
Thecc.08G196300 Theobroma cacao HOM05D005529 ORTHO05D006800 5.2e-13 77.4 60 66.7
unitig_32.g11170 Utricularia gibba HOM05D005529 ORTHO05D006800 8.8e-13 76.6 60 66.7
CSS0023417 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 1.2e-12 76.3 60 68.3
Cpa.g.sc26.128 Carica papaya HOM05D005529 ORTHO05D006800 1.2e-12 76.3 60 66.7
Manes.18G096400 Manihot esculenta HOM05D005529 ORTHO05D006800 1.2e-12 76.3 58 67.2
RcHm_v2.0_Chr6g0273541 Rosa chinensis HOM05D005529 ORTHO05D006800 1.2e-12 76.3 71 59.2
Sc26g0003120 Simmondsia chinensis HOM05D005529 ORTHO05D006800 1.2e-12 76.3 60 63.3
MD10G1039400 Malus domestica HOM05D005529 ORTHO05D006800 1.5e-12 75.9 60 65.0
Potri.005G199600 Populus trichocarpa HOM05D005529 ORTHO05D006800 1.5e-12 75.9 60 66.7
Sabra05G0151800 Salix brachista HOM05D005529 ORTHO05D006800 1.5e-12 75.9 60 66.7
CAN.G26.7 Capsicum annuum HOM05D005529 ORTHO05D006800 2.6e-12 75.1 60 66.7
Lsat_1_v5_gn_1_5401 Lactuca sativa HOM05D005529 ORTHO05D006800 2.6e-12 75.1 73 57.5
Lalb_Chr21g0305631 Lupinus albus HOM05D005529 ORTHO05D006800 2.6e-12 75.1 60 65.0
TWI34G1474 Tripterygium wilfordii HOM05D005529 ORTHO05D006800 2.6e-12 75.1 60 66.7
ECA247G3042 Erigeron canadensis HOM05D005529 ORTHO05D006800 3.4e-12 74.7 60 61.7
Ciclev10002214m.g Citrus clementina HOM05D005529 ORTHO05D006800 5.7e-12 73.9 60 66.7
Gohir.A05G247200 Gossypium hirsutum HOM05D005529 ORTHO05D006800 7.5e-12 73.6 60 63.3
Gohir.D05G248700 Gossypium hirsutum HOM05D005529 ORTHO05D006800 7.5e-12 73.6 60 63.3
Gorai.009G259800 Gossypium raimondii HOM05D005529 ORTHO05D006800 7.5e-12 73.6 60 63.3
Lj7C387G8 Lonicera japonica HOM05D005529 ORTHO05D006800 7.5e-12 73.6 60 63.3
HPP92_020840 Vanilla planifolia HOM05D005529 ORTHO05D006800 7.5e-12 73.6 60 65.0
Nn1g05167 Nelumbo nucifera HOM05D005529 ORTHO05D006800 2.8e-11 71.6 60 63.3
Lsat_1_v5_gn_9_42620 Lactuca sativa HOM05D005529 ORTHO05D006800 3.7e-11 71.2 60 65.0
PSO541G1243 Papaver somniferum HOM05D005529 ORTHO05D006800 6.3e-11 70.5 60 63.3
PSO675G2610 Papaver somniferum HOM05D005529 ORTHO05D006800 6.3e-11 70.5 60 63.3
AL2G31360 Arabidopsis lyrata HOM05D005529 ORTHO05D006800 8.3e-11 70.1 58 63.8
AT1G71790 Arabidopsis thaliana HOM05D005529 ORTHO05D006800 8.3e-11 70.1 58 63.8
Carub.0002s1855 Capsella rubella HOM05D005529 ORTHO05D006800 8.3e-11 70.1 58 63.8
AUR62034931 Chenopodium quinoa HOM05D005529 ORTHO05D006800 8.3e-11 70.1 74 55.4
AUR62032105 Chenopodium quinoa HOM05D005529 ORTHO05D006800 1.4e-10 69.3 74 55.4
Aa31LG4G8850 Aethionema arabicum HOM05D005529 ORTHO05D006800 1.8e-10 68.9 58 63.8
Ah.05g168410 Amaranthus hybridus HOM05D005529 ORTHO05D006800 1.8e-10 68.9 60 63.3
BcaC08g46606 Brassica carinata HOM05D005529 ORTHO05D006800 1.8e-10 68.9 58 63.8
BcaC08g46609 Brassica carinata HOM05D005529 ORTHO05D006800 1.8e-10 68.9 58 63.8
A07p37940 Brassica napus HOM05D005529 ORTHO05D006800 1.8e-10 68.9 58 63.8
C06p45850 Brassica napus HOM05D005529 ORTHO05D006800 1.8e-10 68.9 58 63.8
BolC6t39637H Brassica oleracea HOM05D005529 ORTHO05D006800 1.8e-10 68.9 58 63.8
BraA07t31359Z Brassica rapa HOM05D005529 ORTHO05D006800 1.8e-10 68.9 58 63.8
Thhalv10019028m.g Eutrema salsugineum HOM05D005529 ORTHO05D006800 1.8e-10 68.9 58 63.8
Sp5g26810 Schrenkiella parvula HOM05D005529 ORTHO05D006800 1.8e-10 68.9 58 63.8
SpUn0095_0040 Schrenkiella parvula HOM05D005529 ORTHO05D006800 1.8e-10 68.9 58 63.8
ATR0564G028 Amborella trichopoda HOM05D005529 ORTHO05D006800 7.0e-10 67.0 60 55.0
Nn5g28882 Nelumbo nucifera HOM05D005529 ORTHO05D006800 3.5e-09 64.7 60 56.7
Cfa018254 Carpinus fangiana HOM05D005529 ORTHO05D006800 4.5e-09 64.3 54 59.3
MD10G1040900 Malus domestica HOM05D005529 ORTHO05D006800 7.7e-09 63.5 55 61.8
Os03g0381200 Oryza sativa ssp. japonica HOM05D005529 ORTHO05D006800 2.2e-08 62.0 60 60.0
CDE07G0226 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 3.8e-08 61.2 60 53.3
CDE04G0217 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 1.1e-07 59.7 60 55.0
AagrBONN_evm.TU.Sc2ySwM_228.4378 Anthoceros agrestis HOM05D005529 ORTHO05D006800 2.7e-06 55.1 69 44.9
Pp3c1_32040 Physcomitrium patens HOM05D005529 ORTHO05D006800 2.7e-06 55.1 60 48.3
Mapoly0006s0028 Marchantia polymorpha HOM05D005529 ORTHO05D006800 4.7e-06 54.3 71 42.3


User provided reference genes

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