Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.16G098900 Glycine max HOM05D007530 ORTHO05D009556 9.1e-31 136.3 73 100.0
Glyma.18G203200 Glycine max HOM05D007530 ORTHO05D009556 3.5e-30 134.4 73 97.3
Glyma.07G152100 Glycine max HOM05D007530 ORTHO05D009556 5.9e-30 133.7 73 98.6
Phvul.008G096700 Phaseolus vulgaris HOM05D007530 ORTHO05D009556 2.5e-28 128.3 70 94.3
Ca_07655_v3 Cicer arietinum L. HOM05D007530 ORTHO05D009556 2.8e-24 114.8 73 84.9
TAR623G0260 Trochodendron aralioides HOM05D007530 ORTHO05D009556 2.8e-24 114.8 73 83.6
Lalb_Chr01g0023151 Lupinus albus HOM05D007530 ORTHO05D009556 1.1e-23 112.8 70 81.4
Manes.08G093800 Manihot esculenta HOM05D007530 ORTHO05D009556 1.1e-23 112.8 72 81.9
Potri.006G101901 Populus trichocarpa HOM05D007530 ORTHO05D009556 3.1e-23 111.3 72 80.6
arahy.Tifrunner.gnm1.ann1.88RA0A Arachis hypogaea HOM05D007530 ORTHO05D009556 4.1e-23 110.9 74 85.1
GSVIVG01011181001 Vitis vinifera HOM05D007530 ORTHO05D009556 5.4e-23 110.5 73 80.8
Potri.016G118800 Populus trichocarpa HOM05D007530 ORTHO05D009556 9.1e-23 109.8 72 79.2
Manes.09G107300 Manihot esculenta HOM05D007530 ORTHO05D009556 2.0e-22 108.6 72 79.2
Sopen10g034690 Solanum pennellii HOM05D007530 ORTHO05D009556 2.0e-22 108.6 73 72.6
Hma1.2p1_0362F.1_g136440 Hydrangea macrophylla HOM05D007530 ORTHO05D009556 3.5e-22 107.8 67 82.1
Solyc10g085215.1 Solanum lycopersicum HOM05D007530 ORTHO05D009556 4.5e-22 107.5 73 71.2
Nn2g13162 Nelumbo nucifera HOM05D007530 ORTHO05D009556 5.9e-22 107.1 73 78.1
arahy.Tifrunner.gnm1.ann1.ZMF41F Arachis hypogaea HOM05D007530 ORTHO05D009556 7.7e-22 106.7 74 82.4
CsaV3_3G033590 Cucumis sativus L. HOM05D007530 ORTHO05D009556 1.0e-21 106.3 73 78.1
PGSC0003DMG400011024 Solanum tuberosum HOM05D007530 ORTHO05D009556 1.0e-21 106.3 73 69.9
Psat3g126880 Pisum sativum HOM05D007530 ORTHO05D009556 1.3e-21 105.9 73 76.7
Sed0024664 Sechium edule HOM05D007530 ORTHO05D009556 1.3e-21 105.9 73 76.7
arahy.Tifrunner.gnm1.ann1.R0LR40 Arachis hypogaea HOM05D007530 ORTHO05D009556 1.7e-21 105.5 67 85.1
CiPaw.10G157500 Carya illinoinensis HOM05D007530 ORTHO05D009556 1.7e-21 105.5 73 72.6
Gohir.A04G092400 Gossypium hirsutum HOM05D007530 ORTHO05D009556 1.7e-21 105.5 68 80.9
Gohir.D04G131700 Gossypium hirsutum HOM05D007530 ORTHO05D009556 1.7e-21 105.5 68 80.9
Medtr7g068940 Medicago truncatula HOM05D007530 ORTHO05D009556 1.7e-21 105.5 72 76.4
Nitab4.5_0003514g0010 Nicotiana tabacum HOM05D007530 ORTHO05D009556 2.3e-21 105.1 73 69.9
Prupe.6G279800 Prunus persica HOM05D007530 ORTHO05D009556 2.9e-21 104.8 73 72.6
CDE12G0911 Ceratophyllum demersum HOM05D003492 ORTHO05D005115 3.8e-21 104.4 70 78.6
Nitab4.5_0000444g0050 Nicotiana tabacum HOM05D007530 ORTHO05D009556 3.8e-21 104.4 73 69.9
Gorai.012G115500 Gossypium raimondii HOM05D007530 ORTHO05D009556 5.0e-21 104.0 67 80.6
MBI15_g24380_MAGBIO Magnolia biondii HOM05D007530 ORTHO05D009556 5.0e-21 104.0 73 74.0
Migut.L02025 Erythranthe guttata HOM05D007530 ORTHO05D009556 1.1e-20 102.8 73 71.2
MELO3C009149.2 Cucumis melo HOM05D007530 ORTHO05D009556 1.5e-20 102.4 73 74.0
Lalb_Chr19g0124461 Lupinus albus HOM05D007530 ORTHO05D009556 1.5e-20 102.4 64 81.2
Rhsim05G0217200 Rhododendron simsii HOM05D000043 ORTHO05D005398 1.5e-20 102.4 67 80.6
PGSC0003DMG400019174 Solanum tuberosum HOM05D007530 ORTHO05D009556 1.5e-20 102.4 73 69.9
CANSAT35G1517 Cannabis sativa HOM05D007530 ORTHO05D009556 7.2e-20 100.1 71 74.6
Sabra06G0078200 Salix brachista HOM05D007530 ORTHO05D009556 9.5e-20 99.8 67 76.1
PSO384G0267 Papaver somniferum HOM05D007530 ORTHO05D009556 1.2e-19 99.4 67 74.6
Duzib093G1475 Durio zibethinus HOM05D007530 ORTHO05D009556 1.6e-19 99.0 73 75.3
Duzib106G1059 Durio zibethinus HOM05D007530 ORTHO05D009556 1.6e-19 99.0 73 76.7
Nitab4.5_0000770g0040 Nicotiana tabacum HOM05D007530 ORTHO05D009556 1.6e-19 99.0 67 70.1
Thecc.05G013400 Theobroma cacao HOM05D007530 ORTHO05D009556 2.1e-19 98.6 68 77.9
unitig_37.g12653 Utricularia gibba HOM05D007530 ORTHO05D009556 2.1e-19 98.6 73 64.4
CSS0025168 Camellia sinensis var. sinensis HOM05D007530 ORTHO05D009556 4.7e-19 97.4 67 76.1
Thhalv10015199m.g Eutrema salsugineum HOM05D007530 ORTHO05D009556 4.7e-19 97.4 73 67.1
Nitab4.5_0004107g0030 Nicotiana tabacum HOM05D007530 ORTHO05D009556 6.1e-19 97.1 67 68.7
ClCG10G022290 Citrullus lanatus HOM05D007530 ORTHO05D009556 8.0e-19 96.7 67 74.6
SalBow4G2966 Salvia bowleyana HOM05D007530 ORTHO05D009556 8.0e-19 96.7 73 68.5
Sc01g0006890 Simmondsia chinensis HOM05D007530 ORTHO05D009556 1.8e-18 95.5 73 67.1
Hund10987 Selenicereus undatus HOM05D007530 ORTHO05D009556 2.3e-18 95.1 73 71.2
ATR0681G213 Amborella trichopoda HOM05D007530 ORTHO05D009556 8.9e-18 93.2 70 67.1
PGR142G0763 Punica granatum HOM05D007530 ORTHO05D009556 8.9e-18 93.2 68 67.6
Carub.0006s0047 Capsella rubella HOM05D007530 ORTHO05D009556 1.2e-17 92.8 73 61.6
Aa31LG5G18900 Aethionema arabicum HOM05D007530 ORTHO05D009556 1.5e-17 92.4 73 64.4
Sp6g40660 Schrenkiella parvula HOM05D007530 ORTHO05D009556 2.0e-17 92.0 70 62.9
AL6G10780 Arabidopsis lyrata HOM05D007530 ORTHO05D009556 2.6e-17 91.7 70 62.9
CARHR211730 Cardamine hirsuta HOM05D007530 ORTHO05D009556 2.6e-17 91.7 70 62.9
THA.LOC109117252 Tarenaya hassleriana HOM05D007530 ORTHO05D009556 2.6e-17 91.7 73 64.4
MD12G1171600 Malus domestica HOM05D007530 ORTHO05D009556 5.7e-17 90.5 74 67.6
AT5G01350 Arabidopsis thaliana HOM05D007530 ORTHO05D009556 7.5e-17 90.1 70 61.4
BcaB01g06225 Brassica carinata HOM05D007530 ORTHO05D009556 7.5e-17 90.1 70 60.0
Aa31LG1G23010 Aethionema arabicum HOM05D007530 ORTHO05D009556 9.8e-17 89.7 68 66.2
ECA247G1901 Erigeron canadensis HOM05D007530 ORTHO05D009556 9.8e-17 89.7 68 67.6
TPR.G2527 Trifolium pratense HOM05D007530 ORTHO05D009556 1.3e-16 89.4 72 69.4
COL.COLO4_14508 Corchorus olitorius HOM05D002620 ORTHO05D006469 1.7e-16 89.0 65 67.7
HanXRQChr10g0294071 Helianthus annuus HOM05D007530 ORTHO05D009556 2.8e-16 88.2 68 66.2
RcHm_v2.0_Chr3g0462691 Rosa chinensis HOM05D007530 ORTHO05D009556 6.3e-16 87.0 67 61.2
HPP92_021352 Vanilla planifolia HOM05D007530 ORTHO05D009556 6.3e-16 87.0 67 65.7
FvH4_6g11210 Fragaria vesca HOM05D007530 ORTHO05D009556 1.4e-15 85.9 73 60.3
FAN09G3168 Fragaria x ananassa HOM05D007530 ORTHO05D009556 1.4e-15 85.9 73 60.3
FAN14G2496 Fragaria x ananassa HOM05D007530 ORTHO05D009556 1.4e-15 85.9 73 60.3
FAN14G3881 Fragaria x ananassa HOM05D007530 ORTHO05D009556 1.4e-15 85.9 73 60.3
A03p00350 Brassica napus HOM05D000406 ORTHO05D006918 1.8e-15 85.5 67 59.7
C03p00510 Brassica napus HOM05D000406 ORTHO05D006918 1.8e-15 85.5 71 57.7
BolC3t12617H Brassica oleracea HOM05D000406 ORTHO05D006918 1.8e-15 85.5 71 57.7
BraA03t09426Z Brassica rapa HOM05D000406 ORTHO05D006918 1.8e-15 85.5 67 59.7
FAN02G2108 Fragaria x ananassa HOM05D007530 ORTHO05D009556 1.8e-15 85.5 72 59.7
Haze_21023 Corylus avellana HOM05D002620 ORTHO05D006469 2.4e-15 85.1 89 57.3
FAN05G2692 Fragaria x ananassa HOM05D007530 ORTHO05D009556 2.4e-15 85.1 65 61.5
HPP92_021347 Vanilla planifolia HOM05D007530 ORTHO05D009556 9.2e-15 83.2 67 62.7
EL10Ac5g12543 Beta vulgaris HOM05D007530 ORTHO05D009556 1.2e-14 82.8 73 58.9
TWI74G1090 Tripterygium wilfordii HOM05D007530 ORTHO05D009556 4.6e-14 80.9 68 63.2
Cc06_g01140 Coffea canephora HOM05D007530 ORTHO05D009556 1.3e-13 79.3 50 74.0
vmacro20294 Vaccinium macrocarpon HOM05D007530 ORTHO05D009556 1.5e-12 75.9 47 80.9
Mapoly0015s0144 Marchantia polymorpha HOM05D007530 ORTHO05D009556 1.9e-12 75.5 73 56.2
Os04g0508100 Oryza sativa ssp. japonica HOM05D007530 ORTHO05D009556 1.9e-12 75.5 70 55.7
Eucgr.G03069 Eucalyptus grandis HOM05D007530 ORTHO05D009556 2.1e-11 72.0 44 79.5
Aqoxy2G00850 Aquilegia oxysepala HOM05D007530 ORTHO05D009556 4.7e-11 70.9 73 50.7
arahy.Tifrunner.gnm1.ann1.K2ZES1 Arachis hypogaea HOM05D008645 ORTHO05D009556 4.7e-11 70.9 47 85.1
Pp3c21_22550 Physcomitrium patens HOM05D007530 ORTHO05D009556 4.7e-11 70.9 65 55.4
Zm00001eb426270 Zea mays HOM05D007530 ORTHO05D009556 1.0e-10 69.7 70 55.7
CSS0006801 Camellia sinensis var. sinensis HOM05D007530 ORTHO05D009556 1.4e-10 69.3 46 76.1
CAN.G243.17 Capsicum annuum HOM05D007530 ORTHO05D009556 5.2e-10 67.4 47 70.2
Peaxi162Scf00014g00124 Petunia axillaris HOM05D007530 ORTHO05D009556 8.9e-10 66.6 47 72.3
Cpa.g.sc11.95 Carica papaya HOM05D007530 ORTHO05D009556 1.2e-09 66.2 42 76.2
AagrBONN_evm.TU.Sc2ySwM_117.3278 Anthoceros agrestis HOM05D007530 ORTHO05D009556 4.4e-09 64.3 67 50.7
Lsat_1_v5_gn_9_35161 Lactuca sativa HOM05D007530 ORTHO05D009556 5.8e-09 63.9 46 69.6
Lj1g0004890 Lotus japonicus HOM05D007530 ORTHO05D009556 9.8e-09 63.2 41 75.6
Sabra16G0114900 Salix brachista HOM05D007530 ORTHO05D000135 1.3e-08 62.8 54 63.0
Oeu033582.2 Olea europaea HOM05D007530 ORTHO05D009556 6.4e-08 60.5 55 61.8
Hma1.2p1_0024F.1_g016010 Hydrangea macrophylla HOM05D007530 ORTHO05D009556 3.2e-07 58.2 48 64.6


User provided reference genes

Program Settings