Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.16G097152 Glycine max HOM05D004746 ORTHO05D005863 3.7e-152 541.6 288 100.0
Glyma.07G152800 Glycine max HOM05D004746 ORTHO05D005863 6.6e-141 504.2 280 96.8
Glyma.18G203900 Glycine max HOM05D004746 ORTHO05D005863 1.0e-138 496.9 280 94.6
Phvul.008G095700 Phaseolus vulgaris HOM05D004746 ORTHO05D005863 3.4e-137 491.9 280 93.6
VMungo1383G1310 Vigna mungo HOM05D004746 ORTHO05D005863 1.6e-134 483.0 280 92.1
Psat3g125960 Pisum sativum HOM05D004746 ORTHO05D005863 2.7e-134 482.3 280 91.8
TPR.G35441 Trifolium pratense HOM05D004746 ORTHO05D005863 1.0e-133 480.3 280 91.4
Medtr7g069460 Medicago truncatula HOM05D004746 ORTHO05D005863 6.6e-133 477.6 280 90.4
Ca_07663_v3 Cicer arietinum L. HOM05D004746 ORTHO05D005863 8.6e-133 477.2 280 91.4
Lj1g0027952 Lotus japonicus HOM05D004746 ORTHO05D005863 1.4e-130 469.9 280 89.6
arahy.Tifrunner.gnm1.ann1.R9K5QN Arachis hypogaea HOM05D004746 ORTHO05D005863 2.6e-129 465.7 280 88.9
Lalb_Chr19g0124371 Lupinus albus HOM05D004746 ORTHO05D005863 5.6e-124 448.0 280 86.8
arahy.Tifrunner.gnm1.ann1.U1NNDF Arachis hypogaea HOM05D004746 ORTHO05D005863 4.9e-120 434.9 280 84.3
TWI74G1023 Tripterygium wilfordii HOM05D004746 ORTHO05D005863 4.9e-112 408.3 281 76.5
Duzib093G0324 Durio zibethinus HOM05D004746 ORTHO05D005863 2.4e-111 406.0 281 77.2
Atru.chr8.2277 Acer truncatum HOM05D004746 ORTHO05D005863 3.2e-111 405.6 281 76.5
Ciclev10010971m.g Citrus clementina HOM05D004746 ORTHO05D005863 4.2e-111 405.2 281 77.2
Thecc.05G012200 Theobroma cacao HOM05D004746 ORTHO05D005863 9.3e-111 404.1 281 76.5
QL07p034923 Quercus lobata HOM05D004746 ORTHO05D005863 1.2e-110 403.7 281 76.9
Manes.09G106500 Manihot esculenta HOM05D004746 ORTHO05D005863 3.5e-110 402.1 281 76.5
Haze_21030 Corylus avellana HOM05D004746 ORTHO05D005863 7.8e-110 401.0 281 76.9
Potri.016G119900 Populus trichocarpa HOM05D004746 ORTHO05D005863 1.7e-109 399.8 281 75.1
Sabra16G0115800 Salix brachista HOM05D004746 ORTHO05D005863 8.7e-109 397.5 281 74.7
GSVIVG01003936001 Vitis vinifera HOM05D004746 ORTHO05D005863 8.7e-109 397.5 279 74.9
CSS0006394 Camellia sinensis var. sinensis HOM05D004746 ORTHO05D005863 1.3e-107 393.7 280 75.4
CSS0013285 Camellia sinensis var. sinensis HOM05D004746 ORTHO05D005863 1.3e-107 393.7 280 75.4
Duzib128G0341 Durio zibethinus HOM05D004746 ORTHO05D005863 2.8e-107 392.5 280 74.3
Gorai.012G116700 Gossypium raimondii HOM05D004746 ORTHO05D005863 6.2e-107 391.3 281 74.4
FvH4_4g00010 Fragaria vesca HOM05D004746 ORTHO05D005863 8.1e-107 391.0 280 72.9
MD04G1000400 Malus domestica HOM05D004746 ORTHO05D005863 8.1e-107 391.0 280 73.2
Actinidia29088 Actinidia chinensis HOM05D004746 ORTHO05D005863 6.9e-106 387.9 280 74.3
Gohir.D04G132800 Gossypium hirsutum HOM05D004746 ORTHO05D005863 9.0e-106 387.5 281 73.7
Gohir.A04G093500 Gossypium hirsutum HOM05D004746 ORTHO05D005863 2.0e-105 386.3 281 73.7
CiPaw.09G211600 Carya illinoinensis HOM05D004746 ORTHO05D005863 2.6e-105 386.0 281 73.7
PGSC0003DMG400006259 Solanum tuberosum HOM05D004746 ORTHO05D005863 3.4e-105 385.6 280 72.1
Sopen09g001110 Solanum pennellii HOM05D004746 ORTHO05D005863 9.9e-105 384.0 280 71.8
Lj3C949T2 Lonicera japonica HOM05D004746 ORTHO05D005863 2.9e-104 382.5 280 71.4
PGR031G3962 Punica granatum HOM05D004746 ORTHO05D005863 2.9e-104 382.5 280 72.1
Gorai.002G262500 Gossypium raimondii HOM05D004746 ORTHO05D005863 3.8e-104 382.1 281 73.0
Gohir.A01G226580 Gossypium hirsutum HOM05D004746 ORTHO05D005863 1.4e-103 380.2 284 72.9
Nn2g10907 Nelumbo nucifera HOM05D004746 ORTHO05D005863 1.9e-103 379.8 285 72.6
CARHR083300 Cardamine hirsuta HOM05D004746 ORTHO05D005863 2.4e-103 379.4 280 70.7
FAN17G1409 Fragaria x ananassa HOM05D004746 ORTHO05D005863 7.1e-103 377.9 285 70.9
AT3G08960 Arabidopsis thaliana HOM05D004746 ORTHO05D005863 9.3e-103 377.5 280 70.7
Eucgr.A00543 Eucalyptus grandis HOM05D004746 ORTHO05D005863 9.3e-103 377.5 280 69.6
FAN22G0460 Fragaria x ananassa HOM05D004746 ORTHO05D005863 9.3e-103 377.5 285 70.9
THA.LOC104823290 Tarenaya hassleriana HOM05D004746 ORTHO05D005863 1.2e-102 377.1 280 70.4
Actinidia11569 Actinidia chinensis HOM05D004746 ORTHO05D005863 2.1e-102 376.3 280 72.5
AL3G19980 Arabidopsis lyrata HOM05D004746 ORTHO05D005863 2.1e-102 376.3 280 71.1
Peaxi162Scf01132g00141 Petunia axillaris HOM05D004746 ORTHO05D005863 4.6e-102 375.2 278 70.5
BolC3t16657H Brassica oleracea HOM05D004746 ORTHO05D005863 1.3e-101 373.6 280 70.0
Aa31LG5G18930 Aethionema arabicum HOM05D004746 ORTHO05D005863 3.0e-101 372.5 280 69.3
Hund10978 Selenicereus undatus HOM05D004746 ORTHO05D005863 3.9e-101 372.1 280 68.2
Ah.02g115550 Amaranthus hybridus HOM05D004746 ORTHO05D005863 6.6e-101 371.3 281 70.1
C03p43890 Brassica napus HOM05D004746 ORTHO05D005863 6.6e-101 371.3 280 69.6
Gohir.D01G216252 Gossypium hirsutum HOM05D004746 ORTHO05D005863 6.6e-101 371.3 280 71.1
Carub.0003s0809 Capsella rubella HOM05D004746 ORTHO05D005863 8.7e-101 370.9 280 69.6
BraA03t12796Z Brassica rapa HOM05D004746 ORTHO05D005863 1.1e-100 370.5 280 69.3
A03p36250 Brassica napus HOM05D004746 ORTHO05D005863 1.5e-100 370.2 280 69.3
Sed0023855 Sechium edule HOM05D004746 ORTHO05D005863 1.9e-100 369.8 280 72.1
A05p39880 Brassica napus HOM05D004746 ORTHO05D005863 3.3e-100 369.0 280 67.9
C05p58920 Brassica napus HOM05D004746 ORTHO05D005863 3.3e-100 369.0 280 67.9
BolC5t34545H Brassica oleracea HOM05D004746 ORTHO05D005863 5.6e-100 368.2 280 67.9
BraSC256t45936Z Brassica rapa HOM05D004746 ORTHO05D005863 5.6e-100 368.2 278 68.0
MELO3C020253.2 Cucumis melo HOM05D004746 ORTHO05D005863 5.6e-100 368.2 280 71.8
CsaV3_3G021150 Cucumis sativus L. HOM05D004746 ORTHO05D005863 5.6e-100 368.2 280 71.8
Psat2g043480 Pisum sativum HOM05D004746 ORTHO05D005863 7.4e-100 367.9 232 84.9
Cc06_g01090 Coffea canephora HOM05D004746 ORTHO05D005863 9.6e-100 367.5 280 68.6
EL10Ac5g12532 Beta vulgaris HOM05D004746 ORTHO05D005863 1.3e-99 367.1 280 68.6
DCAR_018683 Daucus carota HOM05D004746 ORTHO05D005863 2.1e-99 366.3 280 68.6
Thhalv10019980m.g Eutrema salsugineum HOM05D004746 ORTHO05D005863 6.2e-99 364.8 280 68.6
AUR62010444 Chenopodium quinoa HOM05D004746 ORTHO05D005863 1.4e-98 363.6 280 67.1
PSO339G1342 Papaver somniferum HOM05D004746 ORTHO05D005863 1.4e-98 363.6 281 69.0
Sp3g07380 Schrenkiella parvula HOM05D004746 ORTHO05D005863 1.4e-98 363.6 280 68.2
CANSAT56G3938 Cannabis sativa HOM05D004746 ORTHO05D005863 5.3e-98 361.7 283 70.0
DCAR_015390 Daucus carota HOM05D004746 ORTHO05D005863 2.6e-97 359.4 280 67.9
MSTRG.10207 Avicennia marina HOM05D004746 ORTHO05D005863 9.9e-97 357.5 280 66.8
Lsat_1_v5_gn_8_100840 Lactuca sativa HOM05D004746 ORTHO05D005863 2.9e-96 355.9 280 68.2
PSO801G0820 Papaver somniferum HOM05D004746 ORTHO05D005863 3.8e-96 355.5 281 68.0
Sc01g0006870 Simmondsia chinensis HOM05D004746 ORTHO05D005863 1.9e-95 353.2 258 69.4
SGA_v2.0_scaffold85G26719 Striga asiatica HOM05D004746 ORTHO05D005863 1.9e-95 353.2 280 67.1
Migut.J00134 Erythranthe guttata HOM05D004746 ORTHO05D005863 3.2e-95 352.4 280 67.9
vmacro20299 Vaccinium macrocarpon HOM05D004746 ORTHO05D005863 2.1e-94 349.7 296 65.5
MBI01_g40022_MAGBIO Magnolia biondii HOM05D004746 ORTHO05D005863 2.7e-94 349.4 288 63.2
HanXRQChr12g0383171 Helianthus annuus HOM05D004746 ORTHO05D005863 4.6e-94 348.6 280 67.5
ECA236G1680 Erigeron canadensis HOM05D004746 ORTHO05D005863 1.0e-93 347.4 280 67.5
Oeu033576.1 Olea europaea HOM05D004746 ORTHO05D005863 1.8e-93 346.7 342 57.6
Nitab4.5_0009417g0010 Nicotiana tabacum HOM05D004746 ORTHO05D005863 3.3e-92 342.4 278 65.8
Oeu063393.2 Olea europaea HOM05D004746 ORTHO05D005863 3.3e-92 342.4 340 57.1
BcaC05g29630 Brassica carinata HOM05D004746 ORTHO05D005863 4.3e-92 342.0 280 64.6
ClCG05G011310 Citrullus lanatus HOM05D004746 ORTHO05D005863 1.3e-91 340.5 280 68.6
AUR62030473 Chenopodium quinoa HOM05D004746 ORTHO05D005863 6.2e-91 338.2 286 62.9
Aqoxy7G03079 Aquilegia oxysepala HOM05D004746 ORTHO05D005863 5.3e-90 335.1 280 61.1
Nitab4.5_0000195g0230 Nicotiana tabacum HOM05D004746 ORTHO05D005863 1.1e-87 327.4 278 64.4
Cfa017175 Carpinus fangiana HOM05D004746 ORTHO05D005863 2.7e-86 322.8 214 79.4
unitig_26.g9084 Utricularia gibba HOM05D004746 ORTHO05D005863 1.3e-85 320.5 278 61.2
Gohir.D01G216126 Gossypium hirsutum HOM05D004746 ORTHO05D005863 1.1e-84 317.4 281 65.1
Dinv13139 Davidia involucrata HOM05D004746 ORTHO05D005863 1.5e-84 317.0 214 76.6
TWI77G0319 Tripterygium wilfordii HOM05D004746 ORTHO05D005863 3.4e-81 305.8 281 63.0
ATR0681G361 Amborella trichopoda HOM05D004746 ORTHO05D005863 4.5e-81 305.4 285 56.8
CDE08G1427 Ceratophyllum demersum HOM05D004746 ORTHO05D005863 1.4e-79 300.4 285 58.2
BcaC01g04209 Brassica carinata HOM05D004746 ORTHO05D005863 1.4e-74 283.9 280 57.1
Zm00001eb111960 Zea mays HOM05D004746 ORTHO05D005863 7.7e-73 278.1 262 56.9
Prupe.1G000300 Prunus persica HOM05D004746 ORTHO05D005863 1.1e-68 264.2 280 55.0
Cpa.g.sc120.53 Carica papaya HOM05D004746 ORTHO05D005863 1.3e-64 250.8 285 53.0
Dinv16904 Davidia involucrata HOM05D004746 ORTHO05D005863 1.3e-64 250.8 203 69.5
HPP92_001120 Vanilla planifolia HOM05D004746 ORTHO05D005863 2.6e-60 236.5 284 49.3
Mapoly0056s0005 Marchantia polymorpha HOM05D004746 ORTHO05D005863 2.0e-57 226.9 292 45.9
Pp3c2_22550 Physcomitrium patens HOM05D004746 ORTHO05D005863 1.1e-55 221.1 282 46.8
AagrBONN_evm.TU.Sc2ySwM_362.215 Anthoceros agrestis HOM05D004746 ORTHO05D005863 1.5e-55 220.7 280 46.1
Pp3c14_210 Physcomitrium patens HOM05D004746 ORTHO05D005863 1.9e-55 220.3 282 46.1
SMO241G0033 Selaginella moellendorffii HOM05D004746 ORTHO05D005863 1.2e-49 201.1 296 40.2
SEGI_16247 Sequoiadendron giganteum HOM05D004746 ORTHO05D005863 3.5e-49 199.5 180 54.4
Os07g0693400 Oryza sativa ssp. japonica HOM05D004746 ORTHO05D005863 2.2e-43 180.3 284 41.2
SMO232G0101 Selaginella moellendorffii HOM05D004746 ORTHO05D005863 1.6e-41 174.1 281 39.5
COL.COLO4_14504 Corchorus olitorius HOM05D004746 ORTHO05D005863 5.6e-31 139.0 88 75.0
CAN.G5.2 Capsicum annuum HOM05D004746 ORTHO05D005863 5.7e-28 129.0 102 68.6
CAN.G5.1 Capsicum annuum HOM05D004746 ORTHO05D005863 3.5e-25 119.8 92 65.2
HPP92_001053 Vanilla planifolia HOM05D004746 ORTHO05D005863 4.6e-25 119.4 92 62.0
CBR_g44565 Chara braunii HOM05D004746 ORTHO05D001702 1.0e-24 118.2 183 37.7
PRCOL_00000669 Prasinoderma coloniale HOM05D004746 ORTHO05D005863 3.4e-20 103.2 226 32.3
SEGI_11102 Sequoiadendron giganteum HOM05D004746 ORTHO05D005863 6.8e-13 79.0 117 41.0
Cre02.g078885 Chlamydomonas reinhardtii HOM05D004746 ORTHO05D005863 1.6e-06 57.8 215 27.0
CBR_g44564 Chara braunii HOM05D000019 ORTHO05D000048 6.2e-06 55.8 57 47.4


User provided reference genes

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