Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.16G097051 Glycine max HOM05D004746 ORTHO05D005863 4.1e-63 244.6 127 100.0
Glyma.07G152800 Glycine max HOM05D004746 ORTHO05D005863 5.4e-63 244.2 126 100.0
Glyma.18G203900 Glycine max HOM05D004746 ORTHO05D005863 2.1e-59 232.3 126 95.2
VMungo1383G1310 Vigna mungo HOM05D004746 ORTHO05D005863 3.1e-58 228.4 126 92.9
Phvul.008G095700 Phaseolus vulgaris HOM05D004746 ORTHO05D005863 4.0e-58 228.0 126 92.9
Ca_07663_v3 Cicer arietinum L. HOM05D004746 ORTHO05D005863 3.8e-56 221.5 126 88.9
Lalb_Chr19g0124371 Lupinus albus HOM05D004746 ORTHO05D005863 1.9e-55 219.2 126 88.9
Lj1g0027952 Lotus japonicus HOM05D004746 ORTHO05D005863 1.6e-54 216.1 126 87.3
Psat3g125960 Pisum sativum HOM05D004746 ORTHO05D005863 6.0e-54 214.2 126 86.5
TPR.G35441 Trifolium pratense HOM05D004746 ORTHO05D005863 6.6e-53 210.7 126 84.9
Medtr7g069460 Medicago truncatula HOM05D004746 ORTHO05D005863 8.7e-53 210.3 126 84.1
arahy.Tifrunner.gnm1.ann1.R9K5QN Arachis hypogaea HOM05D004746 ORTHO05D005863 2.5e-52 208.8 126 83.3
arahy.Tifrunner.gnm1.ann1.U1NNDF Arachis hypogaea HOM05D004746 ORTHO05D005863 2.5e-52 208.8 126 83.3
GSVIVG01003938001 Vitis vinifera HOM05D004746 ORTHO05D005863 1.3e-48 196.4 126 79.4
QL07p034923 Quercus lobata HOM05D004746 ORTHO05D005863 1.7e-48 196.1 126 78.6
Cfa017175 Carpinus fangiana HOM05D004746 ORTHO05D005863 2.9e-48 195.3 126 78.6
CSS0006394 Camellia sinensis var. sinensis HOM05D004746 ORTHO05D005863 4.9e-48 194.5 126 79.4
CSS0013285 Camellia sinensis var. sinensis HOM05D004746 ORTHO05D005863 4.9e-48 194.5 126 79.4
Haze_21030 Corylus avellana HOM05D004746 ORTHO05D005863 8.4e-48 193.7 126 77.8
COL.COLO4_14503 Corchorus olitorius HOM05D004746 ORTHO05D005863 1.1e-47 193.4 126 78.6
Duzib128G0341 Durio zibethinus HOM05D004746 ORTHO05D005863 1.4e-47 193.0 126 77.8
Ciclev10010971m.g Citrus clementina HOM05D004746 ORTHO05D005863 1.9e-47 192.6 126 77.0
Gohir.A01G226580 Gossypium hirsutum HOM05D004746 ORTHO05D005863 3.2e-47 191.8 126 77.8
Manes.09G106500 Manihot esculenta HOM05D004746 ORTHO05D005863 3.2e-47 191.8 126 77.0
Dinv13139 Davidia involucrata HOM05D004746 ORTHO05D005863 7.1e-47 190.7 126 77.0
PSO339G1342 Papaver somniferum HOM05D004746 ORTHO05D005863 1.2e-46 189.9 126 74.6
CiPaw.09G211600 Carya illinoinensis HOM05D004746 ORTHO05D005863 1.6e-46 189.5 126 78.6
MD04G1000200 Malus domestica HOM05D004746 ORTHO05D005863 1.6e-46 189.5 126 76.2
Atru.chr8.2277 Acer truncatum HOM05D004746 ORTHO05D005863 2.1e-46 189.1 126 77.0
Gorai.002G262500 Gossypium raimondii HOM05D004746 ORTHO05D005863 2.1e-46 189.1 126 77.0
Nn2g10907 Nelumbo nucifera HOM05D004746 ORTHO05D005863 2.1e-46 189.1 126 77.0
Thecc.05G012200 Theobroma cacao HOM05D004746 ORTHO05D005863 2.1e-46 189.1 126 77.0
EL10Ac5g12532 Beta vulgaris HOM05D004746 ORTHO05D005863 2.7e-46 188.7 126 75.4
Hund10978 Selenicereus undatus HOM05D004746 ORTHO05D005863 2.7e-46 188.7 126 76.2
TAR633G1894 Trochodendron aralioides HOM05D004746 ORTHO05D005863 2.7e-46 188.7 126 77.0
Actinidia29088 Actinidia chinensis HOM05D004746 ORTHO05D005863 4.6e-46 188.0 126 76.2
Ah.02g115550 Amaranthus hybridus HOM05D004746 ORTHO05D005863 4.6e-46 188.0 126 75.4
A05p39880 Brassica napus HOM05D004746 ORTHO05D005863 4.6e-46 188.0 126 77.0
BraSC256t45936Z Brassica rapa HOM05D004746 ORTHO05D005863 4.6e-46 188.0 126 77.0
Cc06_g01090 Coffea canephora HOM05D004746 ORTHO05D005863 4.6e-46 188.0 126 76.2
Thhalv10019980m.g Eutrema salsugineum HOM05D004746 ORTHO05D005863 4.6e-46 188.0 126 77.0
Sopen09g001110 Solanum pennellii HOM05D004746 ORTHO05D005863 4.6e-46 188.0 126 74.6
Lsat_1_v5_gn_8_100840 Lactuca sativa HOM05D004746 ORTHO05D005863 6.0e-46 187.6 126 76.2
Oeu063393.2 Olea europaea HOM05D004746 ORTHO05D005863 7.8e-46 187.2 126 74.6
C05p58920 Brassica napus HOM05D004746 ORTHO05D005863 1.0e-45 186.8 126 76.2
BolC5t34545H Brassica oleracea HOM05D004746 ORTHO05D005863 1.0e-45 186.8 126 76.2
Gohir.D01G216126 Gossypium hirsutum HOM05D004746 ORTHO05D005863 1.0e-45 186.8 126 76.2
Gohir.D01G216252 Gossypium hirsutum HOM05D004746 ORTHO05D005863 1.0e-45 186.8 126 76.2
TWI74G1023 Tripterygium wilfordii HOM05D004746 ORTHO05D005863 1.0e-45 186.8 126 76.2
FvH4_4g00010 Fragaria vesca HOM05D004746 ORTHO05D005863 1.3e-45 186.4 126 73.8
Oeu033576.1 Olea europaea HOM05D004746 ORTHO05D005863 1.3e-45 186.4 126 73.0
Aa31LG5G18930 Aethionema arabicum HOM05D004746 ORTHO05D005863 1.7e-45 186.0 126 76.2
Gohir.D04G132800 Gossypium hirsutum HOM05D004746 ORTHO05D005863 1.7e-45 186.0 126 74.6
Gorai.012G116700 Gossypium raimondii HOM05D004746 ORTHO05D005863 1.7e-45 186.0 126 74.6
PSO801G0820 Papaver somniferum HOM05D004746 ORTHO05D005863 2.3e-45 185.7 126 73.0
Aqoxy7G03079 Aquilegia oxysepala HOM05D004746 ORTHO05D005863 3.9e-45 184.9 126 74.6
Gohir.A04G093500 Gossypium hirsutum HOM05D004746 ORTHO05D005863 3.9e-45 184.9 126 73.8
Sp3g07380 Schrenkiella parvula HOM05D004746 ORTHO05D005863 3.9e-45 184.9 126 75.4
THA.LOC104823290 Tarenaya hassleriana HOM05D004746 ORTHO05D005863 6.6e-45 184.1 126 75.4
Eucgr.A00543 Eucalyptus grandis HOM05D004746 ORTHO05D005863 8.7e-45 183.7 126 75.4
FAN22G0460 Fragaria x ananassa HOM05D004746 ORTHO05D005863 1.1e-44 183.3 126 73.0
PGR031G3962 Punica granatum HOM05D004746 ORTHO05D005863 1.1e-44 183.3 126 75.4
FAN12G3124 Fragaria x ananassa HOM05D004746 ORTHO05D005863 1.5e-44 183.0 126 73.0
Actinidia11569 Actinidia chinensis HOM05D004746 ORTHO05D005863 1.9e-44 182.6 126 74.6
FAN17G1409 Fragaria x ananassa HOM05D004746 ORTHO05D005863 1.9e-44 182.6 126 73.0
Duzib093G0324 Durio zibethinus HOM05D004746 ORTHO05D005863 3.3e-44 181.8 126 73.0
ECA236G1680 Erigeron canadensis HOM05D004746 ORTHO05D005863 5.6e-44 181.0 126 73.0
Migut.J00134 Erythranthe guttata HOM05D004746 ORTHO05D005863 5.6e-44 181.0 126 73.0
CANSAT56G3938 Cannabis sativa HOM05D004746 ORTHO05D005863 7.3e-44 180.6 126 72.2
Potri.016G119900 Populus trichocarpa HOM05D004746 ORTHO05D005863 7.3e-44 180.6 126 73.0
BcaC01g04209 Brassica carinata HOM05D004746 ORTHO05D005863 1.3e-43 179.9 127 74.8
A03p36250 Brassica napus HOM05D004746 ORTHO05D005863 1.3e-43 179.9 127 74.8
C03p43890 Brassica napus HOM05D004746 ORTHO05D005863 1.3e-43 179.9 127 74.8
BolC3t16657H Brassica oleracea HOM05D004746 ORTHO05D005863 1.3e-43 179.9 127 74.8
Sabra16G0115800 Salix brachista HOM05D004746 ORTHO05D005863 2.1e-43 179.1 126 72.2
AL3G19980 Arabidopsis lyrata HOM05D004746 ORTHO05D005863 2.8e-43 178.7 126 73.0
BraA03t12796Z Brassica rapa HOM05D004746 ORTHO05D005863 2.8e-43 178.7 127 74.0
TWI77G0319 Tripterygium wilfordii HOM05D004746 ORTHO05D005863 3.6e-43 178.3 126 73.8
MSTRG.10207 Avicennia marina HOM05D004746 ORTHO05D005863 4.8e-43 177.9 126 71.4
BcaC05g29630 Brassica carinata HOM05D004746 ORTHO05D005863 1.1e-42 176.8 116 77.6
DCAR_015390 Daucus carota HOM05D004746 ORTHO05D005863 1.1e-42 176.8 126 72.2
DCAR_018683 Daucus carota HOM05D004746 ORTHO05D005863 1.1e-42 176.8 126 72.2
AT3G08960 Arabidopsis thaliana HOM05D004746 ORTHO05D005863 1.4e-42 176.4 126 73.0
SGA_v2.0_scaffold85G26719 Striga asiatica HOM05D004746 ORTHO05D005863 1.4e-42 176.4 145 65.5
Dinv16905 Davidia involucrata HOM05D004746 ORTHO05D005863 4.0e-42 174.9 126 73.0
Carub.0003s0809 Capsella rubella HOM05D004746 ORTHO05D005863 1.5e-41 172.9 126 71.4
CDE08G1427 Ceratophyllum demersum HOM05D004746 ORTHO05D005863 2.0e-41 172.6 126 68.3
AUR62030473 Chenopodium quinoa HOM05D004746 ORTHO05D005863 5.8e-41 171.0 126 73.0
HanXRQChr12g0383171 Helianthus annuus HOM05D004746 ORTHO05D005863 9.9e-41 170.2 116 73.3
ATR0681G361 Amborella trichopoda HOM05D004746 ORTHO05D005863 1.3e-40 169.9 126 66.7
Peaxi162Scf01132g00141 Petunia axillaris HOM05D004746 ORTHO05D005863 2.2e-40 169.1 145 62.1
AUR62010444 Chenopodium quinoa HOM05D004746 ORTHO05D005863 2.9e-40 168.7 126 72.2
Zm00001eb111960 Zea mays HOM05D004746 ORTHO05D005863 1.9e-39 166.0 126 68.3
Prupe.1G000100 Prunus persica HOM05D004746 ORTHO05D005863 2.4e-39 165.6 110 76.4
CDE04G0811 Ceratophyllum demersum HOM05D000083 ORTHO05D000196 1.2e-38 163.3 126 65.1
Lj3A949T17 Lonicera japonica HOM05D004746 ORTHO05D005863 1.0e-37 160.2 166 55.4
HPP92_001120 Vanilla planifolia HOM05D004746 ORTHO05D005863 1.0e-37 160.2 126 65.1
unitig_26.g9084 Utricularia gibba HOM05D004746 ORTHO05D005863 3.9e-37 158.3 126 65.9
vmacro20299 Vaccinium macrocarpon HOM05D004746 ORTHO05D005863 1.1e-36 156.8 181 50.3
SEGI_16247 Sequoiadendron giganteum HOM05D004746 ORTHO05D005863 2.5e-36 155.6 126 61.1
Pp3c14_210 Physcomitrium patens HOM05D004746 ORTHO05D005863 9.6e-36 153.7 127 61.4
Pp3c2_22550 Physcomitrium patens HOM05D004746 ORTHO05D005863 1.8e-34 149.4 127 61.4
ClCG05G011270 Citrullus lanatus HOM05D004746 ORTHO05D005863 6.9e-34 147.5 131 60.3
Sed0023855 Sechium edule HOM05D004746 ORTHO05D005863 6.9e-34 147.5 131 59.5
MELO3C020253.2 Cucumis melo HOM05D004746 ORTHO05D005863 9.0e-34 147.1 131 59.5
AagrBONN_evm.TU.Sc2ySwM_362.215 Anthoceros agrestis HOM05D004746 ORTHO05D005863 1.2e-33 146.7 126 57.1
CBR_g44557 Chara braunii HOM05D004746 ORTHO05D005863 2.6e-33 145.6 127 56.7
Mapoly0056s0005 Marchantia polymorpha HOM05D004746 ORTHO05D005863 2.6e-33 145.6 126 55.6
CsaV3_3G021150 Cucumis sativus L. HOM05D004746 ORTHO05D005863 3.4e-33 145.2 131 59.5
Rhsim05G0217800 Rhododendron simsii HOM05D004746 ORTHO05D005863 1.3e-32 143.3 134 57.5
Os03g0292900 Oryza sativa ssp. japonica HOM05D004746 ORTHO05D005863 8.7e-29 130.6 126 54.8
Psat3g181680 Pisum sativum HOM05D004746 ORTHO05D005863 8.7e-29 130.6 78 83.3
SMO241G0033 Selaginella moellendorffii HOM05D004746 ORTHO05D005863 1.1e-28 130.2 135 51.1
MBI01_g40022_MAGBIO Magnolia biondii HOM05D004746 ORTHO05D005863 8.2e-27 124.0 79 78.5
CAN.G610.28 Capsicum annuum HOM05D004746 ORTHO05D005863 1.2e-25 120.2 79 74.7
SMO232G0101 Selaginella moellendorffii HOM05D004746 ORTHO05D005863 1.3e-24 116.7 120 50.0
HPP92_001054 Vanilla planifolia HOM05D004746 ORTHO05D005863 2.7e-22 109.0 126 54.0
Sc01g0006870 Simmondsia chinensis HOM05D004746 ORTHO05D005863 8.7e-21 104.0 64 79.7
Os07g0693400 Oryza sativa ssp. japonica HOM05D004746 ORTHO05D005863 7.6e-17 90.9 126 44.4
PRCOL_00000669 Prasinoderma coloniale HOM05D004746 ORTHO05D005863 2.5e-15 85.9 130 38.5
Cre02.g078885 Chlamydomonas reinhardtii HOM05D004746 ORTHO05D005863 1.4e-13 80.1 125 35.2
Cpa.g.sc120.51 Carica papaya HOM05D004746 ORTHO05D005863 2.8e-11 72.4 57 66.7
MBI01_g36267_MAGBIO Magnolia biondii HOM05D004746 ORTHO05D005863 4.8e-11 71.6 45 73.3
CAN.G740.7 Capsicum annuum HOM05D004746 ORTHO05D005863 1.5e-09 66.6 47 70.2
Cre02.g084650 Chlamydomonas reinhardtii HOM05D004746 ORTHO05D146592 1.6e-06 56.6 127 29.9


User provided reference genes

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