Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.16G086401 Glycine max HOM05D005779 ORTHO05D007040 1.7e-54 215.7 103 100.0
Glyma.02G022000 Glycine max HOM05D005779 ORTHO05D007040 8.4e-22 107.1 54 92.6
Glyma.01G042300 Glycine max HOM05D005779 ORTHO05D007040 9.2e-21 103.6 54 88.9
Phvul.002G066800 Phaseolus vulgaris HOM05D005779 ORTHO05D007040 1.5e-18 96.3 54 81.5
VMungo1215G1118 Vigna mungo HOM05D005779 ORTHO05D007040 4.3e-18 94.7 54 81.5
Psat2g124360 Pisum sativum HOM05D005779 ORTHO05D007040 1.9e-10 69.3 62 56.5
Lalb_Chr04g0256331 Lupinus albus HOM05D005779 ORTHO05D007040 1.3e-09 66.6 58 58.6
Lj2g0023025 Lotus japonicus HOM05D005779 ORTHO05D007040 1.6e-09 66.2 65 52.3
Nn4g23040 Nelumbo nucifera HOM05D005779 ORTHO05D007040 2.1e-09 65.9 91 38.5
Ca_04740_v3 Cicer arietinum L. HOM05D005779 ORTHO05D007040 4.8e-09 64.7 64 54.7
COL.COLO4_07922 Corchorus olitorius HOM05D005779 ORTHO05D007040 8.1e-09 63.9 85 40.0
GSVIVG01020075001 Vitis vinifera HOM05D005779 ORTHO05D007040 8.1e-09 63.9 69 44.9
Potri.008G180700 Populus trichocarpa HOM05D005779 ORTHO05D007040 1.1e-08 63.5 100 37.0
Haze_12067 Corylus avellana HOM05D005779 ORTHO05D007040 1.4e-08 63.2 72 48.6
arahy.Tifrunner.gnm1.ann1.6QLS7G Arachis hypogaea HOM05D005779 ORTHO05D007040 2.4e-08 62.4 69 47.8
arahy.Tifrunner.gnm1.ann1.KX1I2A Arachis hypogaea HOM05D005779 ORTHO05D007040 2.4e-08 62.4 69 47.8
Cfa009038 Carpinus fangiana HOM05D005779 ORTHO05D007040 2.4e-08 62.4 72 48.6
Eucgr.G02552 Eucalyptus grandis HOM05D005779 ORTHO05D007040 2.4e-08 62.4 72 44.4
Medtr5g038420 Medicago truncatula HOM05D005779 ORTHO05D007040 2.4e-08 62.4 56 62.5
MD16G1078900 Malus domestica HOM05D005779 ORTHO05D007040 4.0e-08 61.6 68 44.1
Manes.05G096400 Manihot esculenta HOM05D005779 ORTHO05D007040 4.0e-08 61.6 64 48.4
Potri.010G053500 Populus trichocarpa HOM05D005779 ORTHO05D007040 4.0e-08 61.6 100 34.0
TPR.G13765 Trifolium pratense HOM05D005779 ORTHO05D007040 5.3e-08 61.2 63 50.8
Manes.01G190501 Manihot esculenta HOM05D005779 ORTHO05D007040 6.9e-08 60.8 63 49.2
TWI18G0628 Tripterygium wilfordii HOM05D005779 ORTHO05D007040 6.9e-08 60.8 64 48.4
TAR622G1412 Trochodendron aralioides HOM05D005779 ORTHO05D007040 6.9e-08 60.8 71 43.7
PGR119G2093 Punica granatum HOM05D005779 ORTHO05D007040 9.0e-08 60.5 100 35.0
RcHm_v2.0_Chr4g0440651 Rosa chinensis HOM05D005779 ORTHO05D007040 9.0e-08 60.5 66 45.5
Dinv24953 Davidia involucrata HOM05D005779 ORTHO05D007040 1.2e-07 60.1 71 43.7
Migut.L01345 Erythranthe guttata HOM05D005779 ORTHO05D007040 1.2e-07 60.1 71 42.3
Oeu001591.1 Olea europaea HOM05D005779 ORTHO05D007040 1.2e-07 60.1 71 40.8
Lj6A794T100 Lonicera japonica HOM05D005779 ORTHO05D007040 1.5e-07 59.7 71 40.8
Sabra08G0137900 Salix brachista HOM05D005779 ORTHO05D007040 1.5e-07 59.7 99 36.4
Ciclev10031752m.g Citrus clementina HOM05D005779 ORTHO05D007040 2.0e-07 59.3 68 41.2
TAR374G1408 Trochodendron aralioides HOM05D005779 ORTHO05D007040 2.0e-07 59.3 95 35.8
BcaC06g34047 Brassica carinata HOM05D005779 ORTHO05D007040 2.6e-07 58.9 79 39.2
C07p33320 Brassica napus HOM05D005779 ORTHO05D007040 2.6e-07 58.9 79 39.2
BolC7t43842H Brassica oleracea HOM05D005779 ORTHO05D007040 2.6e-07 58.9 79 39.2
A06p43540 Brassica napus HOM05D005779 ORTHO05D007040 3.4e-07 58.5 79 38.0
PSO017G2269 Papaver somniferum HOM05D005779 ORTHO05D007040 3.4e-07 58.5 83 37.3
CiPaw.06G080500 Carya illinoinensis HOM05D005779 ORTHO05D007040 4.5e-07 58.2 72 44.4
Gohir.A03G098200 Gossypium hirsutum HOM05D005779 ORTHO05D007040 4.5e-07 58.2 95 33.7
MD13G1079100 Malus domestica HOM05D005779 ORTHO05D007040 5.8e-07 57.8 68 42.6
Aqoxy3G00779 Aquilegia oxysepala HOM05D005779 ORTHO05D007040 7.6e-07 57.4 112 33.9
AUR62026449 Chenopodium quinoa HOM05D005779 ORTHO05D007040 7.6e-07 57.4 71 40.8
Dinv34200 Davidia involucrata HOM05D005779 ORTHO05D007040 7.6e-07 57.4 72 41.7
Gohir.D02G114900 Gossypium hirsutum HOM05D005779 ORTHO05D007040 7.6e-07 57.4 85 36.5
Gorai.005G139000 Gossypium raimondii HOM05D005779 ORTHO05D007040 7.6e-07 57.4 85 36.5
FAN17G2159 Fragaria x ananassa HOM05D005779 ORTHO05D007040 9.9e-07 57.0 66 43.9
Sabra10G0017100 Salix brachista HOM05D005779 ORTHO05D007040 9.9e-07 57.0 61 44.3
Thecc.02G355400 Theobroma cacao HOM05D005779 ORTHO05D007040 9.9e-07 57.0 92 34.8
Atru.chr11.1855 Acer truncatum HOM05D005779 ORTHO05D007040 1.7e-06 56.2 68 41.2
FAN07G0318 Fragaria x ananassa HOM05D005779 ORTHO05D007040 1.7e-06 56.2 66 42.4
Actinidia08214 Actinidia chinensis HOM05D005779 ORTHO05D007040 2.9e-06 55.5 71 39.4
BraA06t27239Z Brassica rapa HOM05D005779 ORTHO05D007040 3.8e-06 55.1 79 36.7
unitig_8.g2946 Utricularia gibba HOM05D001270 ORTHO05D001099 3.8e-06 55.1 85 38.8
Prupe.1G267700 Prunus persica HOM05D005779 ORTHO05D007040 4.9e-06 54.7 60 45.0
Rhsim12G0057300 Rhododendron simsii HOM05D005779 ORTHO05D007040 4.9e-06 54.7 68 42.6
BcaC06g31222 Brassica carinata HOM05D005779 ORTHO05D007040 6.4e-06 54.3 86 37.2
AUR62026256 Chenopodium quinoa HOM05D005779 ORTHO05D007040 6.4e-06 54.3 70 38.6
AL5G11900 Arabidopsis lyrata HOM05D005779 ORTHO05D007040 8.4e-06 53.9 59 45.8
CSS0017461 Camellia sinensis var. sinensis HOM05D005779 ORTHO05D007040 8.4e-06 53.9 71 39.4
DCAR_027379 Daucus carota HOM05D005779 ORTHO05D007040 8.4e-06 53.9 72 38.9
DCAR_027381 Daucus carota HOM05D005779 ORTHO05D007040 8.4e-06 53.9 72 38.9
Duzib251G0167 Durio zibethinus HOM05D005779 ORTHO05D007040 8.4e-06 53.9 65 41.5
FAN12G0925 Fragaria x ananassa HOM05D005779 ORTHO05D007040 8.4e-06 53.9 66 39.4
FAN22G1520 Fragaria x ananassa HOM05D005779 ORTHO05D007040 8.4e-06 53.9 66 40.9
SalBow2G1620 Salvia bowleyana HOM05D005779 ORTHO05D007040 8.4e-06 53.9 63 42.9
SalBow2G2320 Salvia bowleyana HOM05D005779 ORTHO05D007040 8.4e-06 53.9 63 42.9


User provided reference genes

Program Settings