Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.16G084900 Glycine max HOM05D008291 ORTHO05D003568 4.7e-58 227.6 115 100.0
Lj1g0021760 Lotus japonicus HOM05D008291 ORTHO05D003568 5.0e-23 111.3 113 50.4
Lj2g0007253 Lotus japonicus HOM05D008291 ORTHO05D003568 4.3e-19 98.2 100 50.0
Sopen09g001250 Solanum pennellii HOM05D008291 ORTHO05D000669 3.7e-18 95.1 104 47.1
Solyc12g038430.3 Solanum lycopersicum HOM05D008291 ORTHO05D012653 1.4e-17 93.2 104 48.1
TPR.G10058 Trifolium pratense HOM05D008291 ORTHO05D003568 1.8e-17 92.8 85 51.8
TPR.G22591 Trifolium pratense HOM05D008291 ORTHO05D003568 1.8e-17 92.8 70 60.0
TPR.G11385 Trifolium pratense HOM05D008291 ORTHO05D003568 4.1e-17 91.7 112 46.4
Solyc12g082720.1 Solanum lycopersicum HOM05D008291 ORTHO05D003568 1.0e-15 87.0 101 44.6
Sopen09g022380 Solanum pennellii HOM05D008291 ORTHO05D000669 2.9e-15 85.5 104 45.2
CAN.G5.16 Capsicum annuum HOM05D008291 ORTHO05D003568 1.9e-14 82.8 79 53.2
TPR.G21602 Trifolium pratense HOM05D008291 ORTHO05D003568 4.6e-13 78.2 74 50.0
Glyma.05G165700 Glycine max HOM05D008291 ORTHO05D000669 1.0e-12 77.0 104 40.4
Ca_17856_v3 Cicer arietinum L. HOM05D008291 ORTHO05D003568 4.3e-11 71.6 100 38.0
Glyma.08G123400 Glycine max HOM05D008291 ORTHO05D000669 4.3e-11 71.6 104 37.5
VMungo0251G2604 Vigna mungo HOM05D008291 ORTHO05D003568 5.7e-11 71.2 104 36.5
CAN.G661.2 Capsicum annuum HOM05D000062 ORTHO05D000043 2.2e-10 69.3 84 42.9
Lj4g0027394 Lotus japonicus HOM05D008291 ORTHO05D003568 2.2e-10 69.3 104 34.6
TPR.G36323 Trifolium pratense HOM05D008291 ORTHO05D003568 2.2e-10 69.3 71 45.1
TPR.G6754 Trifolium pratense HOM05D008291 ORTHO05D003568 3.7e-10 68.6 100 37.0
arahy.Tifrunner.gnm1.ann1.EW3BSR Arachis hypogaea HOM05D008291 ORTHO05D000669 4.8e-10 68.2 81 42.0
arahy.Tifrunner.gnm1.ann1.TSWN09 Arachis hypogaea HOM05D008291 ORTHO05D000669 4.8e-10 68.2 81 42.0
Glyma.13G086800 Glycine max HOM05D008291 ORTHO05D003568 4.8e-10 68.2 53 60.4
Phvul.002G246000 Phaseolus vulgaris HOM05D008291 ORTHO05D003568 1.4e-09 66.6 104 36.5
Sopen10g007560 Solanum pennellii HOM05D008291 ORTHO05D016169 2.9e-07 58.9 83 36.1
Sopen09g016260 Solanum pennellii HOM05D008291 ORTHO05D000669 4.2e-06 55.1 63 49.2
Solyc04g026060.1 Solanum lycopersicum HOM05D008291 ORTHO05D003568 5.5e-06 54.7 51 49.0
CiPaw.14G126400 Carya illinoinensis HOM05D003120 ORTHO05D003568 7.2e-06 54.3 91 34.1


User provided reference genes

Program Settings