Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.16G070800 Glycine max HOM05D007622 ORTHO05D009409 2.1e-61 238.8 117 100.0
Glyma.19G060600 Glycine max HOM05D007622 ORTHO05D009409 2.8e-58 228.4 117 95.7
Phvul.008G153900 Phaseolus vulgaris HOM05D007622 ORTHO05D009409 4.1e-57 224.6 117 94.9
arahy.Tifrunner.gnm1.ann1.QKG8XN Arachis hypogaea HOM05D007622 ORTHO05D009409 4.4e-51 204.5 118 88.1
Medtr7g033680 Medicago truncatula HOM05D007622 ORTHO05D009409 1.6e-48 196.1 117 87.2
Lalb_Chr24g0402871 Lupinus albus HOM05D007622 ORTHO05D009409 1.1e-46 189.9 119 82.4
arahy.Tifrunner.gnm1.ann1.30MLP8 Arachis hypogaea HOM05D007622 ORTHO05D009409 2.1e-45 185.7 129 79.1
Potri.017G071300 Populus trichocarpa HOM05D007622 ORTHO05D009409 1.5e-43 179.5 117 74.4
Potri.001G344700 Populus trichocarpa HOM05D007622 ORTHO05D009409 9.8e-43 176.8 117 75.2
QL02p074426 Quercus lobata HOM05D007622 ORTHO05D009409 2.8e-42 175.3 117 73.5
Lj1g0022477 Lotus japonicus HOM05D007622 ORTHO05D009409 3.7e-42 174.9 125 74.4
MELO3C021583.2 Cucumis melo HOM05D007622 ORTHO05D009409 4.8e-42 174.5 117 73.5
CsaV3_5G027110 Cucumis sativus L. HOM05D007622 ORTHO05D009409 4.8e-42 174.5 117 73.5
CANSAT64G0926 Cannabis sativa HOM05D007622 ORTHO05D009409 6.3e-42 174.1 117 76.1
COL.COLO4_29125 Corchorus olitorius HOM05D000285 ORTHO05D009409 8.3e-42 173.7 104 79.8
ClCG09G019280 Citrullus lanatus HOM05D007622 ORTHO05D009409 1.8e-41 172.6 117 74.4
CiPaw.04G028800 Carya illinoinensis HOM05D007622 ORTHO05D009409 5.4e-41 171.0 117 70.9
Ciclev10017228m.g Citrus clementina HOM05D007622 ORTHO05D009409 9.1e-41 170.2 118 73.7
Sed0017852 Sechium edule HOM05D007622 ORTHO05D009409 9.1e-41 170.2 117 72.6
Sabra16G0223800 Salix brachista HOM05D007622 ORTHO05D009409 1.2e-40 169.9 117 72.6
Gohir.D07G230100 Gossypium hirsutum HOM05D007622 ORTHO05D009409 1.6e-40 169.5 110 78.2
Gorai.001G265400 Gossypium raimondii HOM05D007622 ORTHO05D009409 1.6e-40 169.5 110 78.2
Prupe.3G292200 Prunus persica HOM05D007622 ORTHO05D009409 1.6e-40 169.5 117 71.8
Duzib147G0488 Durio zibethinus HOM05D007622 ORTHO05D009409 2.0e-40 169.1 105 78.1
Gohir.A07G223400 Gossypium hirsutum HOM05D007622 ORTHO05D009409 2.0e-40 169.1 110 77.3
Eucgr.J02247 Eucalyptus grandis HOM05D007622 ORTHO05D009409 4.5e-40 167.9 112 73.2
Dinv35108 Davidia involucrata HOM05D007622 ORTHO05D009409 2.9e-39 165.2 99 80.8
MSTRG.15530 Avicennia marina HOM05D007622 ORTHO05D009409 3.8e-39 164.9 99 78.8
Cc07_g01640 Coffea canephora HOM05D007622 ORTHO05D009409 3.8e-39 164.9 100 76.0
GSVIVG01032401001 Vitis vinifera HOM05D007622 ORTHO05D009409 3.8e-39 164.9 105 76.2
Manes.15G151000 Manihot esculenta HOM05D007622 ORTHO05D009409 5.0e-39 164.5 117 72.6
PGR083G1671 Punica granatum HOM05D007622 ORTHO05D009409 5.0e-39 164.5 108 73.1
DCAR_001440 Daucus carota HOM05D007622 ORTHO05D009409 8.6e-39 163.7 114 71.9
Sopen02g037920 Solanum pennellii HOM05D007622 ORTHO05D009409 1.5e-38 162.9 99 79.8
TPR.G1098 Trifolium pratense HOM05D007622 ORTHO05D009409 1.9e-38 162.5 124 73.4
Actinidia16945 Actinidia chinensis HOM05D007622 ORTHO05D009409 3.3e-38 161.8 92 81.5
CSS0000151 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 3.3e-38 161.8 81 92.6
CSS0044104 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 3.3e-38 161.8 81 92.6
Solyc02g093350.3 Solanum lycopersicum HOM05D007622 ORTHO05D009409 3.3e-38 161.8 99 78.8
PGSC0003DMG400012602 Solanum tuberosum HOM05D007622 ORTHO05D009409 3.3e-38 161.8 99 78.8
Ah.03g137040 Amaranthus hybridus HOM05D007622 ORTHO05D009409 7.2e-38 160.6 92 81.5
MD17G1026500 Malus domestica HOM05D007622 ORTHO05D009409 7.2e-38 160.6 117 70.1
Oeu013968.1 Olea europaea HOM05D007622 ORTHO05D009409 7.2e-38 160.6 99 74.7
Lsat_1_v5_gn_4_184040 Lactuca sativa HOM05D007622 ORTHO05D009409 9.5e-38 160.2 102 75.5
Nn4g22626 Nelumbo nucifera HOM05D007622 ORTHO05D009409 9.5e-38 160.2 110 73.6
Nitab4.5_0003318g0060 Nicotiana tabacum HOM05D007622 ORTHO05D009409 1.6e-37 159.5 99 77.8
TWI36G0684 Tripterygium wilfordii HOM05D007622 ORTHO05D009409 2.1e-37 159.1 117 68.4
Peaxi162Scf00129g01661 Petunia axillaris HOM05D007622 ORTHO05D009409 3.6e-37 158.3 99 77.8
Thecc.04G017800 Theobroma cacao HOM05D007622 ORTHO05D009409 4.7e-37 157.9 108 73.1
Zm00001eb425130 Zea mays HOM05D007622 ORTHO05D009409 4.7e-37 157.9 104 75.0
CAN.G473.12 Capsicum annuum HOM05D007622 ORTHO05D009409 6.1e-37 157.5 94 78.7
Nitab4.5_0001860g0100 Nicotiana tabacum HOM05D007622 ORTHO05D009409 6.1e-37 157.5 94 78.7
Aqoxy5G03768 Aquilegia oxysepala HOM05D007622 ORTHO05D009409 8.0e-37 157.1 110 70.9
SalBow1G5210 Salvia bowleyana HOM05D007622 ORTHO05D009409 8.0e-37 157.1 92 79.3
Sc03g0007350 Simmondsia chinensis HOM05D007622 ORTHO05D009409 8.0e-37 157.1 94 78.7
THA.LOC104805368 Tarenaya hassleriana HOM05D007622 ORTHO05D009409 8.0e-37 157.1 118 67.8
CDE09G0341 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 1.0e-36 156.8 112 68.8
SGA_v2.0_scaffold195G40817 Striga asiatica HOM05D007622 ORTHO05D009409 1.4e-36 156.4 110 70.9
FAN05G3531 Fragaria x ananassa HOM05D007622 ORTHO05D009409 1.8e-36 156.0 99 75.8
FvH4_6g51480 Fragaria vesca HOM05D007622 ORTHO05D009409 2.3e-36 155.6 99 75.8
FAN02G2753 Fragaria x ananassa HOM05D007622 ORTHO05D009409 2.3e-36 155.6 99 75.8
FAN09G4241 Fragaria x ananassa HOM05D007622 ORTHO05D009409 2.3e-36 155.6 99 75.8
FAN14G0072 Fragaria x ananassa HOM05D007622 ORTHO05D009409 2.3e-36 155.6 99 75.8
Hund12976 Selenicereus undatus HOM05D007622 ORTHO05D009409 2.3e-36 155.6 94 78.7
CDE02G3805 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 3.0e-36 155.2 112 67.9
TAR629G2574 Trochodendron aralioides HOM05D007622 ORTHO05D009409 3.0e-36 155.2 104 73.1
AL7G49320 Arabidopsis lyrata HOM05D007622 ORTHO05D009409 4.0e-36 154.8 99 71.7
HanXRQChr09g0255201 Helianthus annuus HOM05D007622 ORTHO05D009409 4.0e-36 154.8 112 67.0
RcHm_v2.0_Chr2g0173121 Rosa chinensis HOM05D007622 ORTHO05D009409 4.0e-36 154.8 96 77.1
PSO111G0004 Papaver somniferum HOM05D007622 ORTHO05D009409 8.9e-36 153.7 94 74.5
Duzib264G0071 Durio zibethinus HOM05D007622 ORTHO05D009409 2.0e-35 152.5 94 77.7
BcaB06g27524 Brassica carinata HOM05D007622 ORTHO05D009409 3.4e-35 151.8 99 73.7
A04p13550 Brassica napus HOM05D000285 ORTHO05D009409 3.4e-35 151.8 99 73.7
C04p47330 Brassica napus HOM05D000285 ORTHO05D009409 3.4e-35 151.8 99 73.7
BolC4t26334H Brassica oleracea HOM05D000285 ORTHO05D009409 3.4e-35 151.8 99 73.7
BraA04t17014Z Brassica rapa HOM05D000285 ORTHO05D009409 3.4e-35 151.8 99 73.7
PSO067G0063 Papaver somniferum HOM05D007622 ORTHO05D009409 3.4e-35 151.8 117 65.8
Thhalv10027995m.g Eutrema salsugineum HOM05D007622 ORTHO05D009409 4.4e-35 151.4 107 68.2
Atru.chr6.2402 Acer truncatum HOM05D007622 ORTHO05D009409 5.7e-35 151.0 95 80.0
AT5G40500 Arabidopsis thaliana HOM05D007622 ORTHO05D009409 5.7e-35 151.0 126 62.7
ECA232G2324 Erigeron canadensis HOM05D007622 ORTHO05D009409 7.5e-35 150.6 104 70.2
Migut.H00074 Erythranthe guttata HOM05D007622 ORTHO05D009409 7.5e-35 150.6 108 67.6
Sp7g01380 Schrenkiella parvula HOM05D007622 ORTHO05D009409 9.8e-35 150.2 117 64.1
EL10Ac6g14084 Beta vulgaris HOM05D007622 ORTHO05D009409 1.7e-34 149.4 94 73.4
Carub.0007s3502 Capsella rubella HOM05D007622 ORTHO05D009409 4.9e-34 147.9 117 63.2
Os04g0482900 Oryza sativa ssp. japonica HOM05D007622 ORTHO05D009409 8.3e-34 147.1 81 82.7
SEGI_15693 Sequoiadendron giganteum HOM05D007622 ORTHO05D009409 1.2e-29 133.3 104 62.5
AagrBONN_evm.TU.Sc2ySwM_117.2472 Anthoceros agrestis HOM05D007622 ORTHO05D009409 1.4e-28 129.8 97 60.8
Rhsim08G0048800 Rhododendron simsii HOM05D007622 ORTHO05D009409 3.0e-28 128.6 94 71.3
Pp3c12_19400 Physcomitrium patens HOM05D007622 ORTHO05D009409 8.9e-28 127.1 100 58.0
Aa31LG9G1100 Aethionema arabicum HOM05D001812 ORTHO05D001874 3.4e-27 125.2 89 68.5
vmacro18290 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 6.4e-26 120.9 92 68.5
Psat3g166480 Pisum sativum HOM05D007622 ORTHO05D009409 6.0e-24 114.4 64 89.1
SMO367G1081 Selaginella moellendorffii HOM05D007622 ORTHO05D009409 2.3e-23 112.5 90 53.3
CBR_g34193 Chara braunii HOM05D007622 ORTHO05D009409 5.0e-23 111.3 82 59.8
VMungo1383G1925 Vigna mungo HOM05D007622 ORTHO05D009409 3.3e-22 108.6 58 91.4
TAR371G1070 Trochodendron aralioides HOM05D007622 ORTHO05D009409 1.2e-21 106.7 91 58.2
MD09G1025400 Malus domestica HOM05D007622 ORTHO05D009409 3.6e-21 105.1 60 83.3
Cre12.g498700 Chlamydomonas reinhardtii HOM05D007622 ORTHO05D009409 2.9e-18 95.5 77 54.5
PRCOL_00004665 Prasinoderma coloniale HOM05D007622 ORTHO05D009409 1.3e-10 70.1 93 31.2
MCO04G361 Micromonas commoda HOM05D007622 ORTHO05D009409 1.7e-07 59.7 78 35.9
vmacro18289 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 1.9e-06 56.2 32 75.0


User provided reference genes

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