Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.16G068200 Glycine max HOM05D007296 ORTHO05D009201 9.9e-65 250.0 128 100.0
Glyma.19G078800 Glycine max HOM05D007296 ORTHO05D009201 5.8e-57 224.2 128 91.4
VMungo1383G0878 Vigna mungo HOM05D007296 ORTHO05D009201 2.2e-43 179.1 117 80.3
Phvul.008G151600 Phaseolus vulgaris HOM05D007296 ORTHO05D009201 5.5e-39 164.5 101 83.2
Psat3g172000 Pisum sativum HOM05D007296 ORTHO05D009201 9.4e-39 163.7 120 70.8
Lj1g0014101 Lotus japonicus HOM05D007296 ORTHO05D009201 3.6e-38 161.8 122 69.7
Medtr7g033080 Medicago truncatula HOM05D007296 ORTHO05D009201 9.7e-36 153.7 117 68.4
Ca_06610_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 4.8e-35 151.4 121 70.2
Ca_30727_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 4.8e-35 151.4 121 70.2
TPR.G1088 Trifolium pratense HOM05D007296 ORTHO05D009201 1.1e-34 150.2 122 65.6
Lalb_Chr22g0360681 Lupinus albus HOM05D007296 ORTHO05D009201 1.9e-31 139.4 114 63.2
QL02p073829 Quercus lobata HOM05D007296 ORTHO05D009201 6.3e-27 124.4 124 55.6
CiPaw.03G046500 Carya illinoinensis HOM05D007296 ORTHO05D009201 4.1e-26 121.7 115 55.7
Cfa007330 Carpinus fangiana HOM05D007296 ORTHO05D009201 2.0e-25 119.4 125 51.2
Potri.001G342100 Populus trichocarpa HOM05D007296 ORTHO05D009201 1.0e-24 117.1 104 60.6
Haze_14767 Corylus avellana HOM05D007296 ORTHO05D009201 2.2e-24 115.9 125 49.6
Glyma.05G115500 Glycine max HOM05D007296 ORTHO05D009201 5.0e-24 114.8 122 54.1
Glyma.19G051600 Glycine max HOM05D007296 ORTHO05D009201 1.1e-23 113.6 122 54.1
Manes.15G152600 Manihot esculenta HOM05D007296 ORTHO05D009201 1.5e-23 113.2 125 53.6
CiPaw.04G030100 Carya illinoinensis HOM05D007296 ORTHO05D009201 4.2e-23 111.7 115 55.7
Atru.chr6.2441 Acer truncatum HOM05D007296 ORTHO05D009201 5.5e-23 111.3 110 60.0
Duzib187G0331 Durio zibethinus HOM05D007296 ORTHO05D009201 5.5e-23 111.3 109 51.4
Nn3g16657 Nelumbo nucifera HOM05D007296 ORTHO05D009201 9.4e-23 110.5 125 48.8
Ciclev10017118m.g Citrus clementina HOM05D007296 ORTHO05D009201 2.1e-22 109.4 115 54.8
CSS0008661 Camellia sinensis var. sinensis HOM05D007296 ORTHO05D009201 2.7e-22 109.0 114 52.6
Thecc.04G021100 Theobroma cacao HOM05D007296 ORTHO05D009201 2.3e-21 105.9 109 54.1
Nn4g22550 Nelumbo nucifera HOM05D007296 ORTHO05D009201 8.8e-21 104.0 112 50.0
Hma1.2p1_0818F.1_g223340 Hydrangea macrophylla HOM05D007296 ORTHO05D009201 1.5e-20 103.2 101 59.4
PSO017G3033 Papaver somniferum HOM05D007296 ORTHO05D009201 7.4e-20 100.9 121 45.5
TAR371G0818 Trochodendron aralioides HOM05D007296 ORTHO05D009201 1.7e-19 99.8 113 47.8
Dinv33417 Davidia involucrata HOM05D007296 ORTHO05D009201 2.8e-19 99.0 114 51.8
Eucgr.I01721 Eucalyptus grandis HOM05D007296 ORTHO05D009201 1.1e-18 97.1 117 51.3
Phvul.004G061700 Phaseolus vulgaris HOM05D007296 ORTHO05D009201 1.1e-18 97.1 125 48.0
ClCG09G019420 Citrullus lanatus HOM05D007296 ORTHO05D009201 1.4e-18 96.7 116 45.7
Sabra15G0109100 Salix brachista HOM05D000631 ORTHO05D000524 1.4e-18 96.7 124 46.0
DCAR_021738 Daucus carota HOM05D000631 ORTHO05D000524 1.8e-18 96.3 113 49.6
Cc02_g32290 Coffea canephora HOM05D007296 ORTHO05D009201 4.1e-18 95.1 123 46.3
Gohir.A09G030400 Gossypium hirsutum HOM05D007296 ORTHO05D009201 9.1e-18 94.0 115 47.8
Prupe.3G295100 Prunus persica HOM05D007296 ORTHO05D009201 9.1e-18 94.0 78 64.1
Sed0024202 Sechium edule HOM05D007296 ORTHO05D009201 2.0e-17 92.8 127 45.7
CsaV3_5G026960 Cucumis sativus L. HOM05D007296 ORTHO05D009201 2.6e-17 92.4 127 44.1
Gohir.D09G030000 Gossypium hirsutum HOM05D007296 ORTHO05D009201 2.6e-17 92.4 115 47.0
ATR0199G042 Amborella trichopoda HOM05D007296 ORTHO05D009201 5.9e-17 91.3 106 48.1
MELO3C021597.2 Cucumis melo HOM05D007296 ORTHO05D009201 1.0e-16 90.5 126 42.9
Lsat_1_v5_gn_2_91081 Lactuca sativa HOM05D007296 ORTHO05D009201 6.5e-16 87.8 97 53.6
Ciclev10022926m.g Citrus clementina HOM05D007296 ORTHO05D009201 1.5e-15 86.7 105 46.7
MBI10_g42976_MAGBIO Magnolia biondii HOM05D007296 ORTHO05D009201 1.5e-15 86.7 104 48.1
Aqoxy3G01286 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 1.9e-15 86.3 105 39.0
TWI56G0033 Tripterygium wilfordii HOM05D007296 ORTHO05D009201 1.9e-15 86.3 124 49.2
SalBow1G6940 Salvia bowleyana HOM05D007296 ORTHO05D009201 2.5e-15 85.9 107 50.5
Cpa.g.sc130.72 Carica papaya HOM05D007296 ORTHO05D009201 3.2e-15 85.5 122 47.5
Prupe.5G162900 Prunus persica HOM05D007296 ORTHO05D009201 5.5e-15 84.7 116 43.1
Lj4g0005296 Lotus japonicus HOM05D007296 ORTHO05D009201 7.2e-15 84.3 110 46.4
CiPaw.11G015200 Carya illinoinensis HOM05D007296 ORTHO05D009201 9.4e-15 84.0 98 50.0
Sc16g0004380 Simmondsia chinensis HOM05D007296 ORTHO05D009201 9.4e-15 84.0 106 45.3
Lsat_1_v5_gn_0_6101 Lactuca sativa HOM05D007296 ORTHO05D009201 2.1e-14 82.8 113 46.9
Thecc.03G117800 Theobroma cacao HOM05D007296 ORTHO05D009201 2.7e-14 82.4 111 43.2
PGR142G0831 Punica granatum HOM05D007296 ORTHO05D009201 3.6e-14 82.0 106 49.1
Ca_30679_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 4.7e-14 81.6 106 42.5
Aqoxy5G03689 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 1.0e-13 80.5 110 41.8
TAR374G0807 Trochodendron aralioides HOM05D007296 ORTHO05D009201 1.0e-13 80.5 98 46.9
CAN.G473.34 Capsicum annuum HOM05D007296 ORTHO05D009201 1.8e-13 79.7 111 40.5
Aqoxy7G03797 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 4.0e-13 78.6 111 41.4
Manes.14G057736 Manihot esculenta HOM05D007296 ORTHO05D009201 6.8e-13 77.8 104 44.2
SGA_v2.0_scaffold47G17522 Striga asiatica HOM05D000631 ORTHO05D000524 1.2e-12 77.0 114 44.7
Phvul.003G206500 Phaseolus vulgaris HOM05D007296 ORTHO05D009201 3.4e-12 75.5 100 40.0
COL.COLO4_30221 Corchorus olitorius HOM05D007296 ORTHO05D009201 5.7e-12 74.7 102 41.2
PGSC0003DMG400012614 Solanum tuberosum HOM05D007296 ORTHO05D009201 1.7e-11 73.2 123 38.2
DCAR_015066 Daucus carota HOM05D007296 ORTHO05D009201 2.2e-11 72.8 108 42.6
Lalb_Chr07g0183081 Lupinus albus HOM05D007296 ORTHO05D009201 4.8e-11 71.6 101 42.6
SGA_v2.0_scaffold135G34923 Striga asiatica HOM05D007296 ORTHO05D009201 4.8e-11 71.6 98 46.9
C09p62750 Brassica napus HOM05D007296 ORTHO05D009201 6.3e-11 71.2 101 48.5
BolC9t59112H Brassica oleracea HOM05D007296 ORTHO05D009201 6.3e-11 71.2 101 48.5
A10p24110 Brassica napus HOM05D007296 ORTHO05D009201 1.1e-10 70.5 101 48.5
BraA10t44476Z Brassica rapa HOM05D007296 ORTHO05D009201 1.1e-10 70.5 101 48.5
SGA_v2.0_scaffold18G08254 Striga asiatica HOM05D007296 ORTHO05D009201 1.1e-10 70.5 106 45.3
Gohir.A07G055400 Gossypium hirsutum HOM05D007296 ORTHO05D009201 1.4e-10 70.1 106 40.6
FAN02G1968 Fragaria x ananassa HOM05D007296 ORTHO05D009201 1.8e-10 69.7 126 41.3
Ah.12g055220 Amaranthus hybridus HOM05D007296 ORTHO05D009201 2.4e-10 69.3 77 49.4
Gohir.D07G059700 Gossypium hirsutum HOM05D007296 ORTHO05D009201 2.4e-10 69.3 106 40.6
Gorai.001G063200 Gossypium raimondii HOM05D007296 ORTHO05D009201 2.4e-10 69.3 106 40.6
FAN09G0682 Fragaria x ananassa HOM05D007296 ORTHO05D009201 3.1e-10 68.9 126 42.1
Migut.H00030 Erythranthe guttata HOM05D007296 ORTHO05D009201 4.1e-10 68.6 101 46.5
Thhalv10014918m.g Eutrema salsugineum HOM05D007296 ORTHO05D009201 4.1e-10 68.6 96 47.9
Sp6g29610 Schrenkiella parvula HOM05D007296 ORTHO05D009201 5.4e-10 68.2 100 49.0
Aa31LG11G15190 Aethionema arabicum HOM05D007296 ORTHO05D009201 7.0e-10 67.8 82 56.1
Carub.0006s1259 Capsella rubella HOM05D007296 ORTHO05D009201 9.1e-10 67.4 101 46.5
ECA246G1504 Erigeron canadensis HOM05D007296 ORTHO05D009201 9.1e-10 67.4 104 41.3
AL6G25130 Arabidopsis lyrata HOM05D007296 ORTHO05D009201 2.0e-09 66.2 102 48.0
FAN05G3275 Fragaria x ananassa HOM05D007296 ORTHO05D009201 2.0e-09 66.2 126 38.1
FvH4_6g51980 Fragaria vesca HOM05D007296 ORTHO05D009201 3.5e-09 65.5 126 39.7
FAN14G0692 Fragaria x ananassa HOM05D007296 ORTHO05D009201 3.5e-09 65.5 126 39.7
QL10p006090 Quercus lobata HOM05D007296 ORTHO05D009201 3.5e-09 65.5 102 39.2
THA.LOC104821171 Tarenaya hassleriana HOM05D007296 ORTHO05D009201 3.5e-09 65.5 100 47.0
AT5G14410 Arabidopsis thaliana HOM05D007296 ORTHO05D009201 4.5e-09 65.1 102 47.1
SalBow7G1031 Salvia bowleyana HOM05D007296 ORTHO05D009201 5.9e-09 64.7 90 45.6
VMungo1215G1852 Vigna mungo HOM05D007296 ORTHO05D009201 5.9e-09 64.7 97 37.1
CARHR198900 Cardamine hirsuta HOM05D007296 ORTHO05D009201 1.3e-08 63.5 95 48.4
RcHm_v2.0_Chr2g0173451 Rosa chinensis HOM05D007296 ORTHO05D009201 2.2e-08 62.8 119 39.5
EL10Ac5g12075 Beta vulgaris HOM05D007296 ORTHO05D009201 5.0e-08 61.6 116 39.7
COL.COLO4_29188 Corchorus olitorius HOM05D005949 ORTHO05D006945 8.5e-08 60.8 79 51.9
Gorai.006G035000 Gossypium raimondii HOM05D007296 ORTHO05D009201 2.5e-07 59.3 115 36.5
Sopen02g038130 Solanum pennellii HOM05D007296 ORTHO05D009201 3.2e-07 58.9 106 34.9
unitig_0.g1597 Utricularia gibba HOM05D004929 ORTHO05D006492 5.5e-07 58.2 130 36.2
Migut.K01416 Erythranthe guttata HOM05D007296 ORTHO05D009201 2.1e-06 56.2 98 40.8
Solyc02g093525.1 Solanum lycopersicum HOM05D007296 ORTHO05D009201 2.7e-06 55.8 106 34.0


User provided reference genes

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