Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.16G058700 Glycine max HOM05D007551 ORTHO05D009424 3.6e-155 553.1 289 100.0
VMungo0251G2062 Vigna mungo HOM05D007551 ORTHO05D009424 1.8e-109 401.4 300 73.7
Phvul.003G277400 Phaseolus vulgaris HOM05D007551 ORTHO05D009424 2.3e-101 374.4 294 73.1
Lj4g0019089 Lotus japonicus HOM05D007551 ORTHO05D009424 2.7e-86 324.3 286 64.3
Lalb_Chr09g0334421 Lupinus albus HOM05D007551 ORTHO05D009424 2.3e-85 321.2 291 60.1
Psat4g109680 Pisum sativum HOM05D007551 ORTHO05D009424 6.1e-70 270.0 244 66.4
Prupe.3G018200 Prunus persica HOM05D007551 ORTHO05D009424 4.4e-68 263.8 293 51.5
Medtr8g071970 Medicago truncatula HOM05D007551 ORTHO05D009424 2.6e-65 254.6 269 56.1
Dinv37453 Davidia involucrata HOM05D007551 ORTHO05D009424 5.0e-64 250.4 290 49.3
Ciclev10000274m.g Citrus clementina HOM05D007551 ORTHO05D009424 3.2e-63 247.7 290 54.1
QL11p054679 Quercus lobata HOM05D007551 ORTHO05D009424 5.5e-63 246.9 292 49.0
FvH4_5g24430 Fragaria vesca HOM05D007551 ORTHO05D009424 2.1e-62 245.0 291 49.1
GSVIVG01036918001 Vitis vinifera HOM05D007551 ORTHO05D009424 4.7e-62 243.8 286 48.3
MD06G1022200 Malus domestica HOM05D007551 ORTHO05D009424 4.0e-61 240.7 289 48.4
FAN13G0867 Fragaria x ananassa HOM05D007551 ORTHO05D009424 5.2e-61 240.4 290 49.7
Cfa012637 Carpinus fangiana HOM05D007551 ORTHO05D009424 1.5e-60 238.8 294 53.7
CiPaw.12G053700 Carya illinoinensis HOM05D007551 ORTHO05D009424 2.2e-59 235.0 290 48.3
Sed0007434 Sechium edule HOM05D007551 ORTHO05D009424 1.4e-58 232.3 233 54.1
TPR.G16813 Trifolium pratense HOM05D007551 ORTHO05D009424 3.1e-58 231.1 239 55.2
RcHm_v2.0_Chr7g0214821 Rosa chinensis HOM05D007551 ORTHO05D009424 1.2e-57 229.2 231 53.7
TAR633G1897 Trochodendron aralioides HOM05D007551 ORTHO05D009424 1.5e-55 222.2 288 45.8
Hma1.2p1_0294F.1_g116420 Hydrangea macrophylla HOM05D007551 ORTHO05D009424 2.5e-55 221.5 296 45.3
TWI34G0706 Tripterygium wilfordii HOM05D007551 ORTHO05D009424 4.2e-55 220.7 274 45.3
TWI60G1073 Tripterygium wilfordii HOM05D007551 ORTHO05D009424 2.7e-54 218.0 271 44.3
Rhsim04G0146500 Rhododendron simsii HOM05D007551 ORTHO05D009424 8.0e-54 216.5 287 44.6
TAR362G0203 Trochodendron aralioides HOM05D007551 ORTHO05D009424 1.0e-53 216.1 290 43.4
ClCG07G011220 Citrullus lanatus HOM05D007551 ORTHO05D009424 1.8e-53 215.3 228 49.6
EL10Ac5g11872 Beta vulgaris HOM05D007551 ORTHO05D009424 3.0e-53 214.5 284 43.7
Lalb_Chr05g0229381 Lupinus albus HOM05D007551 ORTHO05D009424 4.0e-53 214.2 292 49.7
Nn6g33703 Nelumbo nucifera HOM05D007551 ORTHO05D009424 5.2e-53 213.8 230 49.6
Nn1g00676 Nelumbo nucifera HOM05D007551 ORTHO05D009424 1.2e-52 212.6 230 47.4
Sc07g0008330 Simmondsia chinensis HOM05D007551 ORTHO05D009424 4.4e-52 210.7 232 48.7
Atru.chr6.2125 Acer truncatum HOM05D007551 ORTHO05D009424 2.2e-51 208.4 230 48.7
MELO3C016242.2 Cucumis melo HOM05D007551 ORTHO05D009424 4.8e-51 207.2 228 48.2
Sed0011000 Sechium edule HOM05D007551 ORTHO05D009424 8.3e-51 206.5 231 48.5
CsaV3_4G007030 Cucumis sativus L. HOM05D007551 ORTHO05D009424 1.1e-50 206.1 289 41.9
Solyc11g005940.3 Solanum lycopersicum HOM05D007551 ORTHO05D009424 2.4e-50 204.9 302 43.4
Sopen11g001880 Solanum pennellii HOM05D007551 ORTHO05D009424 3.1e-50 204.5 304 43.4
Haze_08024 Corylus avellana HOM05D007551 ORTHO05D009424 4.1e-50 204.1 211 53.6
Ah.12g056170 Amaranthus hybridus HOM05D000351 ORTHO05D009424 7.0e-50 203.4 289 41.9
Thecc.03G322800 Theobroma cacao HOM05D007551 ORTHO05D009424 7.0e-50 203.4 297 47.1
COL.COLO4_16723 Corchorus olitorius HOM05D007551 ORTHO05D009424 2.0e-49 201.8 288 45.1
FvH4_4g10440 Fragaria vesca HOM05D007551 ORTHO05D009424 2.0e-49 201.8 238 47.5
FvH4_4g10410 Fragaria vesca HOM05D007551 ORTHO05D009424 2.7e-49 201.4 238 47.5
PGSC0003DMG402028683 Solanum tuberosum HOM05D007551 ORTHO05D009424 3.5e-49 201.1 295 43.4
Nitab4.5_0000856g0020 Nicotiana tabacum HOM05D007551 ORTHO05D009424 1.0e-48 199.5 295 42.7
Nitab4.5_0002667g0100 Nicotiana tabacum HOM05D007551 ORTHO05D009424 1.3e-48 199.1 295 42.7
Peaxi162Scf00619g00022 Petunia axillaris HOM05D007551 ORTHO05D009424 6.6e-48 196.8 294 39.5
Aa31LG6G2050 Aethionema arabicum HOM05D007551 ORTHO05D009424 5.5e-47 193.7 225 46.2
Oeu029773.2 Olea europaea HOM05D007551 ORTHO05D009424 5.5e-47 193.7 230 46.5
Cc00_g20060 Coffea canephora HOM05D007551 ORTHO05D009424 7.2e-47 193.4 232 44.4
Gohir.A12G200366 Gossypium hirsutum HOM05D007551 ORTHO05D009424 7.2e-47 193.4 299 41.1
AT4G19440 Arabidopsis thaliana HOM05D007551 ORTHO05D009424 1.2e-46 192.6 285 40.4
Thhalv10024401m.g Eutrema salsugineum HOM05D007551 ORTHO05D009424 1.2e-46 192.6 225 45.8
CAN.G652.9 Capsicum annuum HOM05D007551 ORTHO05D009424 2.1e-46 191.8 292 41.4
RcHm_v2.0_Chr4g0405931 Rosa chinensis HOM05D007551 ORTHO05D009424 2.8e-46 191.4 235 45.1
Gorai.N026600 Gossypium raimondii HOM05D007551 ORTHO05D009424 3.6e-46 191.0 290 40.7
RcHm_v2.0_Chr7g0219861 Rosa chinensis HOM05D007551 ORTHO05D009424 3.6e-46 191.0 298 46.6
AL7G34670 Arabidopsis lyrata HOM05D007551 ORTHO05D009424 1.4e-45 189.1 228 45.2
Sp7g18060 Schrenkiella parvula HOM05D007551 ORTHO05D009424 1.4e-45 189.1 288 37.5
Oeu040609.1 Olea europaea HOM05D007551 ORTHO05D009424 4.0e-45 187.6 230 45.2
Lsat_1_v5_gn_6_75081 Lactuca sativa HOM05D007551 ORTHO05D009424 6.8e-45 186.8 227 42.7
Gohir.D12G203200 Gossypium hirsutum HOM05D007551 ORTHO05D009424 2.0e-44 185.3 299 39.8
Potri.003G105700 Populus trichocarpa HOM05D007551 ORTHO05D009424 2.0e-44 185.3 258 43.4
Carub.0007s2177 Capsella rubella HOM05D007551 ORTHO05D009424 9.8e-44 183.0 228 45.2
BcaB03g11619 Brassica carinata HOM05D007551 ORTHO05D009424 1.7e-43 182.2 226 45.1
PSO210G5788 Papaver somniferum HOM05D007551 ORTHO05D009424 2.2e-43 181.8 235 41.3
Eucgr.E01036 Eucalyptus grandis HOM05D007551 ORTHO05D009424 2.8e-43 181.4 227 45.8
Manes.17G006200 Manihot esculenta HOM05D007551 ORTHO05D009424 3.7e-43 181.0 246 43.9
PGR042G1889 Punica granatum HOM05D007551 ORTHO05D009424 4.1e-42 177.6 231 42.9
PSO210G4217 Papaver somniferum HOM05D007551 ORTHO05D009424 1.2e-41 176.0 235 39.6
MSTRG.1750 Avicennia marina HOM05D007551 ORTHO05D009424 2.0e-41 175.3 230 42.6
MBI13_g36729_MAGBIO Magnolia biondii HOM05D007551 ORTHO05D009424 2.3e-40 171.8 233 39.1
SalBow1G3247 Salvia bowleyana HOM05D007551 ORTHO05D009424 3.9e-40 171.0 230 40.0
SalBow8G4006 Salvia bowleyana HOM05D007551 ORTHO05D009424 3.9e-40 171.0 230 40.0
Migut.E01387 Erythranthe guttata HOM05D007551 ORTHO05D009424 5.0e-40 170.6 230 38.7
Sabra03G0072700 Salix brachista HOM05D007551 ORTHO05D009424 6.6e-40 170.2 254 42.5
SGA_v2.0_scaffold121G33050 Striga asiatica HOM05D007551 ORTHO05D009424 4.3e-39 167.5 230 41.3
FAN04G0939 Fragaria x ananassa HOM05D007551 ORTHO05D009424 1.8e-37 162.2 293 41.3
ECA240G1023 Erigeron canadensis HOM05D000046 ORTHO05D000457 2.3e-37 161.8 205 42.4
AUR62044750 Chenopodium quinoa HOM05D007551 ORTHO05D009424 5.8e-36 157.1 174 48.3
Aqoxy2G03897 Aquilegia oxysepala HOM05D007551 ORTHO05D009424 4.6e-33 147.5 180 43.9
Cpa.g.c44844 Carica papaya HOM05D007551 ORTHO05D009424 7.8e-33 146.7 219 42.5
CSS0048505 Camellia sinensis var. sinensis HOM05D007551 ORTHO05D009424 5.6e-31 140.6 144 49.3
CSS0008559 Camellia sinensis var. sinensis HOM05D007551 ORTHO05D009424 1.2e-30 139.4 144 49.3
BolC3t20473H Brassica oleracea HOM05D007551 ORTHO05D009424 2.3e-29 135.2 198 38.4
C03p81990 Brassica napus HOM05D007551 ORTHO05D009424 2.6e-28 131.7 199 38.2
Cpa.g.sc3.432 Carica papaya HOM05D007551 ORTHO05D009424 1.7e-27 129.0 104 57.7
Lj8C372G5 Lonicera japonica HOM05D007551 ORTHO05D009424 1.6e-25 122.5 111 52.3
HPP92_013860 Vanilla planifolia HOM05D007551 ORTHO05D009424 3.5e-25 121.3 233 36.1
CARHR226230 Cardamine hirsuta HOM05D007551 ORTHO05D009424 2.1e-22 112.1 207 34.8
Oeu044967.1 Olea europaea HOM05D007551 ORTHO05D009424 1.8e-21 109.0 123 46.3
Ca_22472_v3 Cicer arietinum L. HOM05D007551 ORTHO05D009424 5.2e-21 107.5 99 61.6
MD16G1287400 Malus domestica HOM05D007551 ORTHO05D009424 5.2e-21 107.5 72 68.1
FAN17G3133 Fragaria x ananassa HOM05D007551 ORTHO05D009424 3.8e-11 74.7 116 37.1
SEGI_02979 Sequoiadendron giganteum HOM05D007551 ORTHO05D006600 3.8e-11 74.7 222 27.5
SalBow8G0178 Salvia bowleyana HOM05D007551 ORTHO05D009424 1.1e-10 73.2 75 44.0
ATR0626G221 Amborella trichopoda HOM05D007551 ORTHO05D009424 2.4e-10 72.0 162 32.7
TAR362G1049 Trochodendron aralioides HOM05D005764 ORTHO05D006600 5.4e-10 70.9 184 31.5
Zm00001eb151970 Zea mays HOM05D059268 ORTHO05D009424 5.4e-10 70.9 182 32.4
Cc10_g03430 Coffea canephora HOM05D007639 ORTHO05D009509 3.5e-09 68.2 236 28.0
Atru.BG.247.p Acer truncatum HOM05D007639 ORTHO05D009509 4.6e-09 67.8 187 28.9
Cc00_g12250 Coffea canephora HOM05D005764 ORTHO05D006600 4.6e-09 67.8 189 27.5
Prupe.5G142900 Prunus persica HOM05D005764 ORTHO05D006600 3.9e-08 64.7 100 38.0
SHI25578 Sapria himalayana HOM05D007639 ORTHO05D009509 5.1e-08 64.3 192 28.1
HPP92_013845 Vanilla planifolia HOM05D007551 ORTHO05D009424 8.7e-08 63.5 100 34.0
MBI02_g38361_MAGBIO Magnolia biondii HOM05D007426 ORTHO05D009167 1.1e-07 63.2 186 28.5
PSO017G0179 Papaver somniferum HOM05D005764 ORTHO05D006600 1.5e-07 62.8 184 26.6
SEGI_12196 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 2.5e-07 62.0 208 26.4
Nn7g38163 Nelumbo nucifera HOM05D005764 ORTHO05D006600 4.3e-07 61.2 106 33.0
DCAR_023623 Daucus carota HOM05D007426 ORTHO05D009167 7.3e-07 60.5 190 26.3
Gohir.D08G049200 Gossypium hirsutum HOM05D007545 ORTHO05D009579 7.3e-07 60.5 226 27.0
BcaB03g12921 Brassica carinata HOM05D007639 ORTHO05D009509 9.6e-07 60.1 205 27.3
CDE02G2785 Ceratophyllum demersum HOM05D005764 ORTHO05D006600 1.3e-06 59.7 121 35.5
Gorai.003G116400 Gossypium raimondii HOM05D005764 ORTHO05D006600 1.3e-06 59.7 219 29.2
MBI19_g08382_MAGBIO Magnolia biondii HOM05D007545 ORTHO05D009579 2.8e-06 58.5 205 23.9
MSTRG.1303 Avicennia marina HOM05D007639 ORTHO05D009509 3.6e-06 58.2 201 26.9
HanXRQChr17g0557061 Helianthus annuus HOM05D007639 ORTHO05D009509 3.6e-06 58.2 195 27.7
Gorai.004G048700 Gossypium raimondii HOM05D007545 ORTHO05D009579 4.8e-06 57.8 226 27.4
PGSC0003DMG400014245 Solanum tuberosum HOM05D005764 ORTHO05D006600 8.1e-06 57.0 188 24.5


User provided reference genes

Program Settings