Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.16G057902 Glycine max HOM05D005599 ORTHO05D006921 7.8e-67 256.9 123 100.0
Glyma.19G089600 Glycine max HOM05D005599 ORTHO05D006921 3.3e-65 251.5 122 98.4
Phvul.001G094900 Phaseolus vulgaris HOM05D005599 ORTHO05D006921 8.4e-61 236.9 123 90.2
Ca_21512_v3 Cicer arietinum L. HOM05D005599 ORTHO05D006921 1.1e-60 236.5 123 90.2
Lj6g0000510 Lotus japonicus HOM05D005599 ORTHO05D006921 1.9e-60 235.7 123 89.4
VMungo0464G0261 Vigna mungo HOM05D005599 ORTHO05D006921 1.2e-59 233.0 123 90.2
TPR.G19139 Trifolium pratense HOM05D005599 ORTHO05D006921 7.8e-59 230.3 123 87.8
Medtr1g069405 Medicago truncatula HOM05D005599 ORTHO05D006921 1.3e-58 229.6 123 87.8
CiPaw.06G011400 Carya illinoinensis HOM05D005599 ORTHO05D006921 1.7e-58 229.2 123 84.6
Manes.15G128100 Manihot esculenta HOM05D005599 ORTHO05D006921 6.6e-58 227.3 123 84.6
QL01p001565 Quercus lobata HOM05D005599 ORTHO05D006921 6.6e-58 227.3 122 85.2
Duzib251G0393 Durio zibethinus HOM05D005599 ORTHO05D006921 1.5e-57 226.1 121 85.1
Psat6g049960 Pisum sativum HOM05D005599 ORTHO05D006921 1.5e-57 226.1 123 87.0
Hund09673 Selenicereus undatus HOM05D005599 ORTHO05D006921 2.5e-57 225.3 123 84.6
AUR62032768 Chenopodium quinoa HOM05D005599 ORTHO05D006921 3.3e-57 224.9 123 83.7
Prupe.1G325600 Prunus persica HOM05D005599 ORTHO05D006921 3.3e-57 224.9 123 83.7
Sc14g0007100 Simmondsia chinensis HOM05D005599 ORTHO05D006921 3.3e-57 224.9 123 84.6
Cfa008617 Carpinus fangiana HOM05D005599 ORTHO05D006921 9.6e-57 223.4 123 83.7
EL10Ac9g21851 Beta vulgaris HOM05D005599 ORTHO05D006921 1.2e-56 223.0 123 83.7
Lalb_Chr08g0237401 Lupinus albus HOM05D005599 ORTHO05D006921 1.2e-56 223.0 123 83.7
Gohir.A03G120800 Gossypium hirsutum HOM05D005599 ORTHO05D006921 2.1e-56 222.2 122 82.8
Thecc.02G282300 Theobroma cacao HOM05D005599 ORTHO05D006921 2.1e-56 222.2 121 84.3
GSVIVG01011752001 Vitis vinifera HOM05D005599 ORTHO05D006921 2.1e-56 222.2 123 82.9
COL.COLO4_20491 Corchorus olitorius HOM05D005599 ORTHO05D006921 3.6e-56 221.5 119 85.7
Rhsim09G0066400 Rhododendron simsii HOM05D005599 ORTHO05D006921 4.7e-56 221.1 123 84.6
Ciclev10017195m.g Citrus clementina HOM05D005599 ORTHO05D006921 6.2e-56 220.7 123 80.5
CsaV3_5G013870 Cucumis sativus L. HOM05D005599 ORTHO05D006921 8.1e-56 220.3 123 82.9
ClCG07G006660 Citrullus lanatus HOM05D005599 ORTHO05D006921 1.1e-55 219.9 123 82.9
Potri.008G129900 Populus trichocarpa HOM05D005599 ORTHO05D006921 1.4e-55 219.5 123 82.1
TWI79G1349 Tripterygium wilfordii HOM05D005599 ORTHO05D006921 1.4e-55 219.5 123 82.1
Gohir.D02G144100 Gossypium hirsutum HOM05D005599 ORTHO05D006921 1.8e-55 219.2 121 82.6
Hma1.2p1_0096F.1_g047800 Hydrangea macrophylla HOM05D005599 ORTHO05D006921 2.4e-55 218.8 123 83.7
MD16G1027400 Malus domestica HOM05D005599 ORTHO05D006921 2.4e-55 218.8 123 81.3
TAR622G1178 Trochodendron aralioides HOM05D005599 ORTHO05D006921 2.4e-55 218.8 123 79.7
MD13G1024900 Malus domestica HOM05D005599 ORTHO05D006921 5.2e-55 217.6 123 80.5
vmacro14440 Vaccinium macrocarpon HOM05D005599 ORTHO05D006921 6.9e-55 217.2 123 82.9
MELO3C018308.2 Cucumis melo HOM05D005599 ORTHO05D006921 9.0e-55 216.9 123 82.1
THA.LOC104823847 Tarenaya hassleriana HOM05D005599 ORTHO05D006921 1.2e-54 216.5 123 80.5
Atru.chr11.497 Acer truncatum HOM05D005599 ORTHO05D006921 2.0e-54 215.7 120 81.7
FAN05G3069 Fragaria x ananassa HOM05D005599 ORTHO05D006921 2.0e-54 215.7 123 80.5
FAN12G4015 Fragaria x ananassa HOM05D005599 ORTHO05D006921 2.0e-54 215.7 123 80.5
FAN25G3147 Fragaria x ananassa HOM05D005599 ORTHO05D006921 2.0e-54 215.7 123 80.5
RcHm_v2.0_Chr4g0425701 Rosa chinensis HOM05D005599 ORTHO05D006921 2.0e-54 215.7 123 80.5
Cc11_g08600 Coffea canephora HOM05D005599 ORTHO05D006921 2.6e-54 215.3 123 80.5
Sed0017153 Sechium edule HOM05D005599 ORTHO05D006921 2.6e-54 215.3 122 81.1
Dinv14427 Davidia involucrata HOM05D005599 ORTHO05D006921 4.4e-54 214.5 123 81.3
PGR004G1422 Punica granatum HOM05D005599 ORTHO05D006921 4.4e-54 214.5 123 78.9
Nitab4.5_0000426g0280 Nicotiana tabacum HOM05D005599 ORTHO05D006921 7.6e-54 213.8 122 81.1
Nitab4.5_0004230g0050 Nicotiana tabacum HOM05D005599 ORTHO05D006921 7.6e-54 213.8 122 81.1
Ah.04g163140 Amaranthus hybridus HOM05D005599 ORTHO05D006921 1.3e-53 213.0 123 80.5
FAN07G1516 Fragaria x ananassa HOM05D005599 ORTHO05D006921 1.3e-53 213.0 123 79.7
Peaxi162Scf00253g01125 Petunia axillaris HOM05D005599 ORTHO05D006921 1.3e-53 213.0 123 79.7
PGSC0003DMG400005984 Solanum tuberosum HOM05D005599 ORTHO05D006921 1.3e-53 213.0 122 81.1
Aa31LG2G8490 Aethionema arabicum HOM05D005599 ORTHO05D006921 1.7e-53 212.6 121 78.5
MBI16_g23758_MAGBIO Magnolia biondii HOM05D005599 ORTHO05D006921 2.2e-53 212.2 122 77.9
CARHR015530 Cardamine hirsuta HOM05D005599 ORTHO05D006921 4.9e-53 211.1 123 77.2
CAN.G1244.3 Capsicum annuum HOM05D005599 ORTHO05D006921 8.4e-53 210.3 122 78.7
Solyc04g007700.3 Solanum lycopersicum HOM05D005599 ORTHO05D006921 1.1e-52 209.9 122 79.5
AL1G27050 Arabidopsis lyrata HOM05D005599 ORTHO05D006921 1.9e-52 209.1 123 76.4
AT1G14990 Arabidopsis thaliana HOM05D005599 ORTHO05D006921 1.9e-52 209.1 123 76.4
FvH4_4g19980 Fragaria vesca HOM05D005599 ORTHO05D006921 1.9e-52 209.1 123 79.7
Potri.010G112300 Populus trichocarpa HOM05D005599 ORTHO05D006921 1.9e-52 209.1 121 79.3
Zm00001eb161570 Zea mays HOM05D005599 ORTHO05D006921 1.9e-52 209.1 123 78.0
A09p61660 Brassica napus HOM05D005599 ORTHO05D006921 2.4e-52 208.8 121 78.5
Eucgr.B01298 Eucalyptus grandis HOM05D005599 ORTHO05D006921 2.4e-52 208.8 123 78.0
Carub.0001s1476 Capsella rubella HOM05D005599 ORTHO05D006921 4.2e-52 208.0 123 77.2
Sp1g13380 Schrenkiella parvula HOM05D005599 ORTHO05D006921 5.4e-52 207.6 123 77.2
Sopen04g002790 Solanum pennellii HOM05D005599 ORTHO05D006921 5.4e-52 207.6 122 78.7
arahy.Tifrunner.gnm1.ann1.UU8CC3 Arachis hypogaea HOM05D005599 ORTHO05D006921 1.6e-51 206.1 106 88.7
DCAR_023596 Daucus carota HOM05D005599 ORTHO05D006921 2.1e-51 205.7 123 74.0
ATR0796G095 Amborella trichopoda HOM05D005599 ORTHO05D006921 2.7e-51 205.3 120 77.5
PSO170G3715 Papaver somniferum HOM05D005599 ORTHO05D006921 2.7e-51 205.3 122 76.2
MSTRG.6631 Avicennia marina HOM05D005599 ORTHO05D006921 4.6e-51 204.5 122 77.9
arahy.Tifrunner.gnm1.ann1.5FG4B2 Arachis hypogaea HOM05D005599 ORTHO05D006921 6.0e-51 204.1 105 88.6
Os01g0606050 Oryza sativa ssp. japonica HOM05D005599 ORTHO05D006921 6.0e-51 204.1 123 77.2
RcHm_v2.0_Chr4g0441361 Rosa chinensis HOM05D005599 ORTHO05D006921 7.8e-51 203.8 131 74.0
A06p11010 Brassica napus HOM05D005599 ORTHO05D006921 1.0e-50 203.4 123 77.2
BolC8t52072H Brassica oleracea HOM05D005599 ORTHO05D006921 1.0e-50 203.4 136 71.3
Aqoxy3G01068 Aquilegia oxysepala HOM05D005599 ORTHO05D006921 1.3e-50 203.0 120 75.0
CDE07G0704 Ceratophyllum demersum HOM05D005599 ORTHO05D006921 1.3e-50 203.0 122 75.4
arahy.Tifrunner.gnm1.ann1.5G098T Arachis hypogaea HOM05D005599 ORTHO05D006921 1.7e-50 202.6 106 86.8
BcaB02g06563 Brassica carinata HOM05D005599 ORTHO05D006921 1.7e-50 202.6 123 76.4
DCAR_026778 Daucus carota HOM05D005599 ORTHO05D006921 3.0e-50 201.8 123 73.2
SGA_v2.0_scaffold181G39695 Striga asiatica HOM05D005599 ORTHO05D006921 5.1e-50 201.1 120 77.5
HPP92_003868 Vanilla planifolia HOM05D005599 ORTHO05D006921 5.1e-50 201.1 122 77.0
HPP92_003899 Vanilla planifolia HOM05D005599 ORTHO05D006921 5.1e-50 201.1 122 77.0
BolC5t30050H Brassica oleracea HOM05D005599 ORTHO05D006921 1.1e-49 199.9 123 75.6
SGA_v2.0_scaffold154G37132 Striga asiatica HOM05D005599 ORTHO05D006921 1.1e-49 199.9 120 76.7
BraA09t41538Z Brassica rapa HOM05D005599 ORTHO05D006921 1.9e-49 199.1 139 69.1
Lsat_1_v5_gn_9_79661 Lactuca sativa HOM05D005599 ORTHO05D006921 7.3e-49 197.2 121 77.7
HanXRQChr08g0212121 Helianthus annuus HOM05D005599 ORTHO05D006921 1.6e-48 196.1 122 76.2
Cpa.g.sc65.146 Carica papaya HOM05D005599 ORTHO05D006921 3.6e-48 194.9 118 74.6
Dinv07654 Davidia involucrata HOM05D005599 ORTHO05D006921 3.6e-48 194.9 105 84.8
HanXRQChr12g0364441 Helianthus annuus HOM05D005599 ORTHO05D006921 3.6e-48 194.9 122 75.4
Haze_10995 Corylus avellana HOM05D005599 ORTHO05D006921 4.8e-48 194.5 113 77.9
AUR62042684 Chenopodium quinoa HOM05D005599 ORTHO05D006921 1.1e-47 193.4 109 79.8
unitig_899.g15269 Utricularia gibba HOM05D005599 ORTHO05D006921 1.1e-47 193.4 118 76.3
ECA236G1659 Erigeron canadensis HOM05D005599 ORTHO05D006921 4.0e-47 191.4 122 73.8
CSS0007655 Camellia sinensis var. sinensis HOM05D005599 ORTHO05D006921 9.0e-47 190.3 106 83.0
CSS0037826 Camellia sinensis var. sinensis HOM05D005599 ORTHO05D006921 9.0e-47 190.3 106 83.0
CANSAT11G1373 Cannabis sativa HOM05D005599 ORTHO05D006921 1.5e-46 189.5 123 69.9
Oeu045860.1 Olea europaea HOM05D005599 ORTHO05D006921 2.0e-46 189.1 105 81.0
C05p13060 Brassica napus HOM05D005599 ORTHO05D006921 5.8e-46 187.6 131 68.7
Gorai.005G161400 Gossypium raimondii HOM05D005599 ORTHO05D006921 5.8e-46 187.6 104 80.8
CSS0001207 Camellia sinensis var. sinensis HOM05D005599 ORTHO05D006921 1.3e-45 186.4 106 80.2
SGA_v2.0_scaffold6G03128 Striga asiatica HOM05D005599 ORTHO05D006921 1.7e-45 186.0 121 72.7
Oeu003383.1 Olea europaea HOM05D005599 ORTHO05D006921 2.9e-45 185.3 105 81.0
Sabra08G0098500 Salix brachista HOM05D005599 ORTHO05D006921 2.9e-45 185.3 106 79.2
vmacro00414 Vaccinium macrocarpon HOM05D005599 ORTHO05D006921 7.1e-44 180.6 106 78.3
Thhalv10009435m.g Eutrema salsugineum HOM05D005599 ORTHO05D006921 9.3e-44 180.3 106 75.5
SEGI_33740 Sequoiadendron giganteum HOM05D005599 ORTHO05D006921 1.6e-43 179.5 116 71.6
C08p45240 Brassica napus HOM05D005599 ORTHO05D006921 7.9e-43 177.2 104 76.0
PSO782G0484 Papaver somniferum HOM05D005599 ORTHO05D006921 1.0e-42 176.8 107 73.8
Sed0011013 Sechium edule HOM05D005599 ORTHO05D006921 1.3e-42 176.4 106 77.4
Sabra10G0082600 Salix brachista HOM05D005599 ORTHO05D006921 1.1e-41 173.3 104 76.0
BraA06t24281Z Brassica rapa HOM05D005599 ORTHO05D006921 1.9e-41 172.6 106 74.5
AUR62014127 Chenopodium quinoa HOM05D005599 ORTHO05D006921 1.6e-40 169.5 86 88.4
Migut.M00054 Erythranthe guttata HOM05D005599 ORTHO05D006921 2.8e-40 168.7 120 68.3
Aqoxy1G03319 Aquilegia oxysepala HOM05D005599 ORTHO05D006921 6.2e-40 167.5 104 71.2
BcaC07g38244 Brassica carinata HOM05D005599 ORTHO05D006921 2.4e-39 165.6 106 72.6
C08p09930 Brassica napus HOM05D005599 ORTHO05D006921 2.4e-39 165.6 106 72.6
BolC8t48670H Brassica oleracea HOM05D005599 ORTHO05D006921 2.4e-39 165.6 106 72.6
Eucgr.E01608 Eucalyptus grandis HOM05D005599 ORTHO05D006921 2.5e-33 145.6 107 66.4
Pp3c16_10100 Physcomitrium patens HOM05D005599 ORTHO05D006921 2.4e-31 139.0 111 55.0
arahy.Tifrunner.gnm1.ann1.XM49AS Arachis hypogaea HOM05D005599 ORTHO05D006921 3.4e-30 135.2 66 89.4
Eucgr.B02904 Eucalyptus grandis HOM05D005599 ORTHO05D006921 1.3e-29 133.3 95 64.2
Mapoly0035s0140 Marchantia polymorpha HOM05D005599 ORTHO05D006921 1.3e-29 133.3 109 56.9
BcaC05g25431 Brassica carinata HOM05D005599 ORTHO05D006921 1.1e-28 130.2 123 53.7
SGA_v2.0_scaffold2G00929 Striga asiatica HOM05D005599 ORTHO05D006921 1.8e-23 112.8 65 76.9
MBI16_g23757_MAGBIO Magnolia biondii HOM05D005599 ORTHO05D006921 8.5e-21 104.0 68 67.6
MBI16_g23756_MAGBIO Magnolia biondii HOM05D000079 ORTHO05D016475 1.2e-19 100.1 69 63.8
Nn4g24251 Nelumbo nucifera HOM05D005599 ORTHO05D006921 2.7e-19 99.0 57 78.9
CBR_g40805 Chara braunii HOM05D005599 ORTHO05D006921 5.3e-15 84.7 65 58.5
DCAR_032107 Daucus carota HOM05D005599 ORTHO05D006921 1.7e-13 79.7 50 66.0
SGA_v2.0_scaffold135G34854 Striga asiatica HOM05D005599 ORTHO05D006921 1.6e-11 73.2 40 72.5
QL08p008929 Quercus lobata HOM05D005599 ORTHO05D006921 3.0e-10 68.9 50 66.0


User provided reference genes

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