Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.16G055300 Glycine max HOM05D003146 ORTHO05D001819 2.0e-95 352.4 178 100.0
Phvul.001G038100 Phaseolus vulgaris HOM05D018574 ORTHO05D001819 7.6e-63 244.2 178 69.1
Glyma.19G092600 Glycine max HOM05D018574 ORTHO05D001819 1.6e-52 209.9 178 62.4
VMungo1383G0905 Vigna mungo HOM05D003146 ORTHO05D001819 5.1e-51 204.9 151 66.9
Lj1g0000753 Lotus japonicus HOM05D003146 ORTHO05D001819 5.1e-35 151.8 180 48.3
Medtr3g462890 Medicago truncatula HOM05D018574 ORTHO05D001819 5.7e-34 148.3 178 49.4
Lalb_Chr22g0349681 Lupinus albus HOM05D018574 ORTHO05D001819 7.9e-28 127.9 171 45.6
Lalb_Chr22g0349691 Lupinus albus HOM05D003146 ORTHO05D001819 8.8e-27 124.4 171 43.3
Medtr3g462880 Medicago truncatula HOM05D018574 ORTHO05D001819 1.5e-26 123.6 178 44.9
Medtr3g037210 Medicago truncatula HOM05D018574 ORTHO05D001819 2.6e-23 112.8 180 42.8
Lalb_Chr16g0386201 Lupinus albus HOM05D007995 ORTHO05D001819 3.8e-14 82.4 188 30.3
Lalb_Chr16g0386221 Lupinus albus HOM05D007995 ORTHO05D001819 3.8e-14 82.4 188 30.9
Lalb_Chr16g0386271 Lupinus albus HOM05D007995 ORTHO05D001819 7.2e-13 78.2 178 29.2
Medtr6g023935 Medicago truncatula HOM05D007995 ORTHO05D001819 9.4e-13 77.8 158 31.6
MELO3C028017.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.1e-12 76.6 163 28.8
MELO3C000643.2 Cucumis melo HOM05D003146 ORTHO05D001819 6.1e-12 75.1 171 28.7
Ca_06775_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 8.0e-12 74.7 171 31.0
Medtr6g023915 Medicago truncatula HOM05D007995 ORTHO05D001819 8.0e-12 74.7 165 30.3
MELO3C000387.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.0e-11 74.3 163 30.1
MELO3C025842.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.0e-11 74.3 165 28.5
MELO3C019864.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.4e-11 73.9 163 29.4
MELO3C027585.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.8e-11 73.6 168 28.6
MELO3C034829.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.3e-11 73.2 162 28.4
MELO3C000722.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.0e-11 72.8 163 28.2
MELO3C030067.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.0e-11 72.8 163 28.8
MELO3C032417.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.9e-11 72.4 163 28.2
CsaV3_UNG225750 Cucumis sativus L. HOM05D003146 ORTHO05D001819 5.2e-11 72.0 146 28.8
Dinv29548 Davidia involucrata HOM05D003146 ORTHO05D001819 5.2e-11 72.0 176 33.5
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 6.7e-11 71.6 150 31.3
MELO3C030065.2 Cucumis melo HOM05D003146 ORTHO05D001819 8.8e-11 71.2 163 31.3
MELO3C001332.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.5e-10 70.5 169 28.4
MELO3C028122.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.5e-10 70.5 169 28.4
CsaV3_UNG084670 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.5e-10 70.5 171 26.9
CsaV3_UNG132030 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.5e-10 70.5 171 26.9
ClCG06G004590 Citrullus lanatus HOM05D003146 ORTHO05D001819 2.0e-10 70.1 161 33.5
CsaV3_2G000020 Cucumis sativus L. HOM05D003146 ORTHO05D001819 2.6e-10 69.7 144 29.2
Lalb_Chr14g0367641 Lupinus albus HOM05D007995 ORTHO05D001819 2.6e-10 69.7 182 27.5
Ca_31166_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 4.4e-10 68.9 135 31.1
CsaV3_6G022330 Cucumis sativus L. HOM05D003146 ORTHO05D001819 4.4e-10 68.9 165 28.5
QL06p013378 Quercus lobata HOM05D003146 ORTHO05D001819 4.4e-10 68.9 179 28.5
MELO3C030075.2 Cucumis melo HOM05D003146 ORTHO05D001819 7.4e-10 68.2 143 28.7
MELO3C034867.2 Cucumis melo HOM05D003146 ORTHO05D001819 7.4e-10 68.2 162 27.2
CsaV3_4G038000 Cucumis sativus L. HOM05D003146 ORTHO05D001819 7.4e-10 68.2 140 29.3
CsaV3_6G023780 Cucumis sativus L. HOM05D003146 ORTHO05D001819 7.4e-10 68.2 140 29.3
CsaV3_UNG007100 Cucumis sativus L. HOM05D003146 ORTHO05D001819 7.4e-10 68.2 140 29.3
CsaV3_UNG217460 Cucumis sativus L. HOM05D003146 ORTHO05D001819 7.4e-10 68.2 140 29.3
CsaV3_UNG235420 Cucumis sativus L. HOM05D003146 ORTHO05D001819 7.4e-10 68.2 140 29.3
CAN.G338.39 Capsicum annuum HOM05D003146 ORTHO05D001819 1.3e-09 67.4 163 27.6
Lalb_Chr22g0356081 Lupinus albus HOM05D007995 ORTHO05D001819 1.3e-09 67.4 171 25.7
ClCG11G011230 Citrullus lanatus HOM05D003146 ORTHO05D001819 1.7e-09 67.0 144 27.1
MELO3C019867.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.7e-09 67.0 169 26.0
MELO3C019866.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.2e-09 66.6 174 27.0
MELO3C030077.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.2e-09 66.6 163 27.0
Actinidia18484 Actinidia chinensis HOM05D003146 ORTHO05D001819 2.8e-09 66.2 148 31.8
MELO3C027044.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.8e-09 66.2 162 27.2
MELO3C019860.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.7e-09 65.9 169 26.6
MELO3C030064.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.7e-09 65.9 163 26.4
CsaV3_6G026320 Cucumis sativus L. HOM05D003146 ORTHO05D001819 3.7e-09 65.9 140 28.6
CsaV3_6G026340 Cucumis sativus L. HOM05D003146 ORTHO05D001819 3.7e-09 65.9 140 28.6
CsaV3_6G027350 Cucumis sativus L. HOM05D003146 ORTHO05D001819 3.7e-09 65.9 140 28.6
MELO3C032509.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.8e-09 65.5 162 26.5
Lalb_Chr16g0386301 Lupinus albus HOM05D007995 ORTHO05D001819 8.2e-09 64.7 149 27.5
MELO3C001272.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.4e-08 63.9 130 30.8
Peaxi162Scf00126g10015 Petunia axillaris HOM05D003146 ORTHO05D001819 1.4e-08 63.9 173 26.6
MELO3C027589.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.8e-08 63.5 130 30.8
Lj3g0018744 Lotus japonicus HOM05D007995 ORTHO05D001819 1.8e-08 63.5 176 29.5
Sed0025500 Sechium edule HOM05D003146 ORTHO05D001819 1.8e-08 63.5 178 25.8
THA.LOC104820282 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.8e-08 63.5 173 26.0
Medtr5g063440 Medicago truncatula HOM05D018574 ORTHO05D001819 2.4e-08 63.2 93 38.7
Medtr6g024085 Medicago truncatula HOM05D007995 ORTHO05D001819 2.4e-08 63.2 178 27.0
Peaxi162Scf00089g00132 Petunia axillaris HOM05D003146 ORTHO05D001819 3.1e-08 62.8 145 28.3
Actinidia36483 Actinidia chinensis HOM05D000573 ORTHO05D001819 5.3e-08 62.0 149 28.9
Nitab4.5_0010452g0030 Nicotiana tabacum HOM05D003146 ORTHO05D001819 5.3e-08 62.0 173 25.4
Nitab4.5_0000035g0080 Nicotiana tabacum HOM05D003146 ORTHO05D001819 7.0e-08 61.6 141 27.7
MELO3C019686.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.2e-07 60.8 165 27.3
Solyc09g072950.1 Solanum lycopersicum HOM05D003146 ORTHO05D001819 1.2e-07 60.8 156 26.9
CsaV3_6G021230 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.6e-07 60.5 160 29.4
Lalb_Chr22g0356001 Lupinus albus HOM05D007995 ORTHO05D001819 2.0e-07 60.1 148 30.4
MELO3C028113.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.6e-07 59.7 94 36.2
MELO3C028053.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.5e-07 59.3 142 28.2
BcaB04g20850 Brassica carinata HOM05D003146 ORTHO05D001819 4.5e-07 58.9 176 25.0
Peaxi162Scf00126g00017 Petunia axillaris HOM05D003146 ORTHO05D001819 4.5e-07 58.9 152 27.0
Sopen09g028760 Solanum pennellii HOM05D003146 ORTHO05D001819 5.9e-07 58.5 156 26.3
MELO3C027826.2 Cucumis melo HOM05D003146 ORTHO05D001819 7.7e-07 58.2 89 33.7
Nitab4.5_0005440g0020 Nicotiana tabacum HOM05D003146 ORTHO05D001819 7.7e-07 58.2 170 24.1
Solyc03g112180.1 Solanum lycopersicum HOM05D003146 ORTHO05D001819 7.7e-07 58.2 164 25.0
A01p37050 Brassica napus HOM05D003146 ORTHO05D001819 1.0e-06 57.8 142 27.5
MELO3C027625.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.0e-06 57.8 117 28.2
CsaV3_6G020170 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.0e-06 57.8 127 29.9
BraA01t03766Z Brassica rapa HOM05D003146 ORTHO05D001819 1.3e-06 57.4 176 24.4
PGSC0003DMG400034620 Solanum tuberosum HOM05D003146 ORTHO05D001819 1.3e-06 57.4 157 25.5
BcaC09g48683 Brassica carinata HOM05D003146 ORTHO05D001819 1.7e-06 57.0 176 24.4
C01p46950 Brassica napus HOM05D003146 ORTHO05D001819 1.7e-06 57.0 176 24.4
C01p46980 Brassica napus HOM05D003146 ORTHO05D001819 1.7e-06 57.0 176 24.4
BolC1t04666H Brassica oleracea HOM05D003146 ORTHO05D001819 1.7e-06 57.0 176 24.4
CsaV3_6G020220 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.7e-06 57.0 127 29.1
Hma1.2p1_3273F.1_g334810 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 1.7e-06 57.0 136 29.4
Hma1.2p1_3469F.1_g336200 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 1.7e-06 57.0 136 29.4
THA.LOC104816708 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.7e-06 57.0 176 25.0
Actinidia14750 Actinidia chinensis HOM05D009438 ORTHO05D010870 2.2e-06 56.6 138 28.3
MELO3C035196.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.9e-06 56.2 172 27.3
Aa31LG10G5730 Aethionema arabicum HOM05D008385 ORTHO05D010806 3.8e-06 55.8 124 29.8
CAN.G338.41 Capsicum annuum HOM05D003146 ORTHO05D001819 3.8e-06 55.8 168 26.2
MELO3C030062.2 Cucumis melo HOM05D003146 ORTHO05D001819 5.0e-06 55.5 104 32.7
THA.LOC104817105 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 5.0e-06 55.5 176 25.0
THA.LOC104825373 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 6.5e-06 55.1 176 24.4


User provided reference genes

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