Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.16G049900 Glycine max HOM05D009313 ORTHO05D011011 1.4e-147 526.2 255 100.0
Glyma.19G101300 Glycine max HOM05D009313 ORTHO05D011011 1.1e-96 357.1 283 66.1
VMungo1383G2680 Vigna mungo HOM05D009313 ORTHO05D011011 6.1e-74 281.6 278 57.9
Phvul.001G086400 Phaseolus vulgaris HOM05D009313 ORTHO05D011011 1.2e-72 277.3 307 53.7
Medtr7g083810 Medicago truncatula HOM05D009313 ORTHO05D011011 4.1e-70 268.9 283 54.4
TPR.G17461 Trifolium pratense HOM05D009313 ORTHO05D011011 3.9e-68 262.3 283 54.4
Lj1g0004251 Lotus japonicus HOM05D009313 ORTHO05D011011 1.4e-65 253.8 279 53.0
Psat3g094040 Pisum sativum HOM05D009313 ORTHO05D011011 7.8e-61 238.0 283 51.2
Lalb_Chr22g0359871 Lupinus albus HOM05D009313 ORTHO05D011011 6.6e-60 235.0 283 50.9
Ca_08127_v3 Cicer arietinum L. HOM05D009313 ORTHO05D011011 4.3e-51 205.7 248 52.0
arahy.Tifrunner.gnm1.ann1.TM67C6 Arachis hypogaea HOM05D009313 ORTHO05D011011 1.2e-50 204.1 289 47.1
arahy.Tifrunner.gnm1.ann1.GK0RAW Arachis hypogaea HOM05D009313 ORTHO05D011011 1.4e-49 200.7 289 46.0
Sabra16G0204400 Salix brachista HOM05D009313 ORTHO05D011011 6.7e-20 102.1 262 31.3
TWI34G0624 Tripterygium wilfordii HOM05D009313 ORTHO05D011011 5.6e-19 99.0 273 30.4
Potri.001G322200 Populus trichocarpa HOM05D009313 ORTHO05D011011 3.7e-18 96.3 262 30.9
Atru.chr6.2639 Acer truncatum HOM05D009313 ORTHO05D011011 4.0e-17 92.8 247 28.7
Thecc.04G045600 Theobroma cacao HOM05D009313 ORTHO05D011011 1.2e-16 91.3 276 33.3
CDE06G0447 Ceratophyllum demersum HOM05D000592 ORTHO05D000900 1.3e-15 87.8 274 30.7
TAR622G0278 Trochodendron aralioides HOM05D000592 ORTHO05D000900 1.3e-15 87.8 280 31.4
Duzib187G0327 Durio zibethinus HOM05D009313 ORTHO05D011011 3.8e-15 86.3 271 30.6
CDE02G0335 Ceratophyllum demersum HOM05D000592 ORTHO05D000900 3.2e-14 83.2 254 29.5
Ciclev10016598m.g Citrus clementina HOM05D009313 ORTHO05D011011 7.1e-14 82.0 238 29.8
Cfa009434 Carpinus fangiana HOM05D000592 ORTHO05D000900 4.6e-13 79.3 268 29.5
Gohir.A07G230300 Gossypium hirsutum HOM05D009313 ORTHO05D011011 2.3e-12 77.0 274 29.6
Nn3g16307 Nelumbo nucifera HOM05D000592 ORTHO05D000900 2.1e-10 70.5 252 31.0
Gohir.D07G237500 Gossypium hirsutum HOM05D009313 ORTHO05D011011 3.7e-10 69.7 273 28.6
Gorai.001G273400 Gossypium raimondii HOM05D009313 ORTHO05D011011 6.3e-10 68.9 275 28.7
CsaV3_3G027710 Cucumis sativus L. HOM05D042272 ORTHO05D011011 1.8e-09 67.4 213 30.0
TAR374G1193 Trochodendron aralioides HOM05D000592 ORTHO05D000900 3.1e-09 66.6 162 33.3
COL.COLO4_13346 Corchorus olitorius HOM05D009313 ORTHO05D011011 1.2e-08 64.7 268 29.5
PSO063G0046 Papaver somniferum HOM05D000592 ORTHO05D000900 1.5e-08 64.3 255 26.3
PSO170G3386 Papaver somniferum HOM05D000592 ORTHO05D000900 1.5e-08 64.3 258 26.4
Psat4g194360 Pisum sativum HOM05D009313 ORTHO05D011011 2.0e-08 63.9 47 74.5
ClCG05G012740 Citrullus lanatus HOM05D042272 ORTHO05D011011 2.6e-08 63.5 220 27.3
MELO3C014809.2 Cucumis melo HOM05D042272 ORTHO05D011011 2.6e-08 63.5 214 27.1
TWI63G0646 Tripterygium wilfordii HOM05D009313 ORTHO05D011011 2.6e-08 63.5 273 28.2
Thecc.02G194900 Theobroma cacao HOM05D000592 ORTHO05D000900 4.5e-08 62.8 255 25.5
Psat1g213240 Pisum sativum HOM05D009313 ORTHO05D011011 5.8e-08 62.4 47 72.3
Duzib132G1222 Durio zibethinus HOM05D000592 ORTHO05D000900 2.9e-07 60.1 227 30.8
Actinidia30596 Actinidia chinensis HOM05D000592 ORTHO05D000900 5.0e-07 59.3 259 26.3
EL10Ac6g13386 Beta vulgaris HOM05D023748 ORTHO05D011011 1.9e-06 57.4 261 26.8
Gohir.A08G072600 Gossypium hirsutum HOM05D000592 ORTHO05D000900 7.2e-06 55.5 246 24.8


User provided reference genes

Program Settings