Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.16G045802 Glycine max HOM05D007245 ORTHO05D009049 1.1e-100 370.2 213 100.0
Glyma.19G106200 Glycine max HOM05D007245 ORTHO05D009049 6.3e-64 248.1 175 80.6
Phvul.001G099200 Phaseolus vulgaris HOM05D007245 ORTHO05D009049 2.9e-53 212.6 175 74.9
VMungo1383G3535 Vigna mungo HOM05D007245 ORTHO05D009049 1.5e-52 210.3 175 73.1
Lalb_Chr24g0402921 Lupinus albus HOM05D007245 ORTHO05D009049 1.8e-39 166.8 182 54.9
Lj1g0022763 Lotus japonicus HOM05D007245 ORTHO05D009049 5.4e-39 165.2 143 62.9
QL02p068579 Quercus lobata HOM05D007245 ORTHO05D009049 1.2e-38 164.1 179 55.3
CiPaw.03G000500 Carya illinoinensis HOM05D007245 ORTHO05D009049 4.5e-38 162.2 157 59.2
Haze_14957 Corylus avellana HOM05D007245 ORTHO05D009049 2.2e-37 159.8 182 54.4
Dinv33262 Davidia involucrata HOM05D007245 ORTHO05D009049 1.1e-36 157.5 180 53.3
Cc09_g07550 Coffea canephora HOM05D007245 ORTHO05D009049 1.9e-36 156.8 180 51.7
MD17G1004200 Malus domestica HOM05D007245 ORTHO05D009049 7.2e-36 154.8 169 52.1
Nn3g16217 Nelumbo nucifera HOM05D007245 ORTHO05D009049 2.1e-35 153.3 181 51.9
Oeu045577.1 Olea europaea HOM05D007245 ORTHO05D009049 2.1e-35 153.3 177 49.7
RcHm_v2.0_Chr2g0176701 Rosa chinensis HOM05D007245 ORTHO05D009049 2.1e-35 153.3 183 48.6
MD09G1001100 Malus domestica HOM05D007245 ORTHO05D009049 1.0e-34 151.0 191 49.2
CSS0002235 Camellia sinensis var. sinensis HOM05D007245 ORTHO05D009049 1.4e-34 150.6 184 51.1
Thecc.04G050800 Theobroma cacao HOM05D007245 ORTHO05D009049 1.4e-34 150.6 181 51.9
MSTRG.15573 Avicennia marina HOM05D007245 ORTHO05D009049 1.8e-34 150.2 180 51.7
CSS0018621 Camellia sinensis var. sinensis HOM05D007245 ORTHO05D009049 4.0e-34 149.1 188 50.0
Lj7P619T29 Lonicera japonica HOM05D007245 ORTHO05D009049 4.0e-34 149.1 187 48.7
Gorai.007G071400 Gossypium raimondii HOM05D007245 ORTHO05D009049 5.2e-34 148.7 180 48.9
Manes.11G073800 Manihot esculenta HOM05D007245 ORTHO05D009049 5.2e-34 148.7 179 50.8
SalBow7G3959 Salvia bowleyana HOM05D007245 ORTHO05D009049 5.2e-34 148.7 185 49.7
Migut.K01486 Erythranthe guttata HOM05D007245 ORTHO05D009049 6.8e-34 148.3 181 50.3
Potri.002G237200 Populus trichocarpa HOM05D007245 ORTHO05D009049 6.8e-34 148.3 177 57.6
FAN05G2831 Fragaria x ananassa HOM05D007245 ORTHO05D009049 8.8e-34 147.9 187 49.2
Prupe.7G011800 Prunus persica HOM05D007245 ORTHO05D009049 8.8e-34 147.9 188 48.4
vmacro18400 Vaccinium macrocarpon HOM05D007245 ORTHO05D009049 8.8e-34 147.9 186 48.9
CANSAT64G0979 Cannabis sativa HOM05D007245 ORTHO05D009049 1.2e-33 147.5 163 52.8
FvH4_6g31080 Fragaria vesca HOM05D007245 ORTHO05D009049 1.2e-33 147.5 187 49.2
Oeu050155.1 Olea europaea HOM05D007245 ORTHO05D009049 1.2e-33 147.5 186 48.9
Gohir.A11G062100 Gossypium hirsutum HOM05D007245 ORTHO05D009049 2.0e-33 146.7 180 47.8
Gohir.D11G065900 Gossypium hirsutum HOM05D007245 ORTHO05D009049 2.0e-33 146.7 180 48.3
Cpa.g.sc70.41 Carica papaya HOM05D007245 ORTHO05D009049 3.4e-33 146.0 194 46.9
PGSC0003DMG400030518 Solanum tuberosum HOM05D007245 ORTHO05D009049 7.5e-33 144.8 180 49.4
Medtr7g084610 Medicago truncatula HOM05D007245 ORTHO05D009049 1.3e-32 144.1 180 55.0
SGA_v2.0_scaffold47G17641 Striga asiatica HOM05D007245 ORTHO05D009049 1.3e-32 144.1 185 48.6
RcHm_v2.0_Chr2g0137761 Rosa chinensis HOM05D007245 ORTHO05D009049 2.2e-32 143.3 186 47.8
Sed0013025 Sechium edule HOM05D007245 ORTHO05D009049 4.9e-32 142.1 184 48.9
Sopen05g004430 Solanum pennellii HOM05D007245 ORTHO05D009049 6.3e-32 141.7 176 50.0
MELO3C014761.2 Cucumis melo HOM05D007245 ORTHO05D009049 8.3e-32 141.4 193 46.1
Atru.chr6.2722 Acer truncatum HOM05D007245 ORTHO05D009049 1.4e-31 140.6 183 47.5
Duzib147G1224 Durio zibethinus HOM05D007245 ORTHO05D009049 1.8e-31 140.2 181 48.1
Nitab4.5_0005411g0120 Nicotiana tabacum HOM05D007245 ORTHO05D009049 2.4e-31 139.8 181 51.9
TAR629G1424 Trochodendron aralioides HOM05D007245 ORTHO05D009049 2.4e-31 139.8 180 50.6
ECA238G1127 Erigeron canadensis HOM05D007245 ORTHO05D009049 3.1e-31 139.4 180 47.8
Dinv25610 Davidia involucrata HOM05D007245 ORTHO05D009049 4.1e-31 139.0 179 47.5
Ciclev10016068m.g Citrus clementina HOM05D007245 ORTHO05D009049 7.0e-31 138.3 158 54.4
ClCG05G012490 Citrullus lanatus HOM05D007245 ORTHO05D009049 1.6e-30 137.1 193 45.1
HanXRQChr09g0245251 Helianthus annuus HOM05D007245 ORTHO05D009049 2.0e-30 136.7 182 48.9
Hma1.2p1_0421F.1_g149920 Hydrangea macrophylla HOM05D007245 ORTHO05D009049 2.7e-30 136.3 180 47.2
Nitab4.5_0005095g0010 Nicotiana tabacum HOM05D007245 ORTHO05D009049 4.5e-30 135.6 174 52.3
AT5G13890 Arabidopsis thaliana HOM05D007245 ORTHO05D009049 5.9e-30 135.2 186 48.4
Carub.0006s1208 Capsella rubella HOM05D007245 ORTHO05D009049 5.9e-30 135.2 185 48.6
CARHR199540 Cardamine hirsuta HOM05D007245 ORTHO05D009049 5.9e-30 135.2 193 47.2
AL6G24530 Arabidopsis lyrata HOM05D007245 ORTHO05D009049 1.3e-29 134.0 186 48.4
BcaC04g19069 Brassica carinata HOM05D007245 ORTHO05D009049 1.3e-29 134.0 182 47.3
C09p63210 Brassica napus HOM05D007245 ORTHO05D009049 1.3e-29 134.0 182 47.3
BolC9t59157H Brassica oleracea HOM05D007245 ORTHO05D009049 1.3e-29 134.0 182 47.3
BcaC04g24245 Brassica carinata HOM05D007245 ORTHO05D009049 3.8e-29 132.5 185 46.5
A10p24470 Brassica napus HOM05D007245 ORTHO05D009049 5.0e-29 132.1 184 45.7
BraA10t44512Z Brassica rapa HOM05D007245 ORTHO05D009049 5.0e-29 132.1 184 45.7
TAR374G0050 Trochodendron aralioides HOM05D000179 ORTHO05D009049 8.6e-29 131.3 179 49.7
TPR.G31664 Trifolium pratense HOM05D007245 ORTHO05D009049 1.1e-28 131.0 144 56.9
Lsat_1_v5_gn_2_60460 Lactuca sativa HOM05D007245 ORTHO05D009049 1.5e-28 130.6 184 43.5
Peaxi162Scf00950g00032 Petunia axillaris HOM05D007245 ORTHO05D009049 1.5e-28 130.6 170 48.8
TWI32G1326 Tripterygium wilfordii HOM05D007245 ORTHO05D009049 1.9e-28 130.2 183 45.9
Thhalv10014197m.g Eutrema salsugineum HOM05D007245 ORTHO05D009049 7.3e-28 128.3 186 47.3
GSVIVG01032953001 Vitis vinifera HOM05D007245 ORTHO05D009049 7.3e-28 128.3 161 49.1
CsaV3_3G020030 Cucumis sativus L. HOM05D007245 ORTHO05D009049 9.5e-28 127.9 193 43.5
Duzib187G0347 Durio zibethinus HOM05D007245 ORTHO05D009049 1.6e-27 127.1 181 48.6
Sp6g30110 Schrenkiella parvula HOM05D007245 ORTHO05D009049 2.1e-27 126.7 181 47.5
Rhsim08G0037800 Rhododendron simsii HOM05D007245 ORTHO05D009049 3.6e-27 125.9 183 45.9
PGR142G1730 Punica granatum HOM05D007245 ORTHO05D009049 6.1e-27 125.2 184 44.6
Aqoxy2G01225 Aquilegia oxysepala HOM05D007245 ORTHO05D009049 1.0e-26 124.4 188 44.1
CAN.G1489.19 Capsicum annuum HOM05D007245 ORTHO05D009049 1.4e-26 124.0 182 41.2
CDE06G2711 Ceratophyllum demersum HOM05D007245 ORTHO05D009049 1.4e-26 124.0 158 46.2
Sc03g0005330 Simmondsia chinensis HOM05D007245 ORTHO05D009049 1.8e-26 123.6 136 52.2
SGA_v2.0_scaffold34G13684 Striga asiatica HOM05D007245 ORTHO05D009049 2.3e-26 123.2 140 52.1
SHI23073 Sapria himalayana HOM05D000105 ORTHO05D000023 5.2e-26 122.1 164 43.9
THA.LOC104822428 Tarenaya hassleriana HOM05D007245 ORTHO05D009049 1.5e-25 120.6 186 47.3
Ah.03g136550 Amaranthus hybridus HOM05D001378 ORTHO05D001249 2.0e-25 120.2 159 47.2
PSO478G0086 Papaver somniferum HOM05D007245 ORTHO05D009049 3.4e-25 119.4 162 45.1
PSO017G6414 Papaver somniferum HOM05D007245 ORTHO05D009049 7.5e-25 118.2 164 44.5
Actinidia37711 Actinidia chinensis HOM05D007245 ORTHO05D009049 2.2e-24 116.7 156 48.1
Manes.04G095000 Manihot esculenta HOM05D007245 ORTHO05D009049 8.3e-24 114.8 159 50.3
Aa31LG11G15470 Aethionema arabicum HOM05D007245 ORTHO05D009049 2.4e-23 113.2 186 43.5
CDE02G4767 Ceratophyllum demersum HOM05D007245 ORTHO05D009049 4.1e-23 112.5 150 45.3
Sed0008898 Sechium edule HOM05D007245 ORTHO05D009049 1.0e-21 107.8 184 41.3
MBI11_g03703_MAGBIO Magnolia biondii HOM05D007245 ORTHO05D009049 2.3e-21 106.7 182 38.5
ATR0582G351 Amborella trichopoda HOM05D007245 ORTHO05D009049 3.0e-21 106.3 156 41.0
Solyc05g008590.4 Solanum lycopersicum HOM05D007245 ORTHO05D009049 5.0e-21 105.5 101 54.5
DCAR_000961 Daucus carota HOM05D007245 ORTHO05D009049 3.6e-19 99.4 172 39.5
Sabra02G0180800 Salix brachista HOM05D007245 ORTHO05D009049 2.9e-16 89.7 83 54.2
SEGI_38415 Sequoiadendron giganteum HOM05D007245 ORTHO05D009049 1.0e-13 81.3 153 35.9
Mapoly0103s0043 Marchantia polymorpha HOM05D007245 ORTHO05D009049 2.8e-11 73.2 156 31.4
HPP92_006441 Vanilla planifolia HOM05D007245 ORTHO05D009049 2.8e-11 73.2 176 34.7
unitig_0.g2407 Utricularia gibba HOM05D007245 ORTHO05D009049 1.8e-10 70.5 176 37.5
Pp3c8_3270 Physcomitrium patens HOM05D007245 ORTHO05D009049 6.4e-08 62.0 156 30.1
AagrBONN_evm.TU.Sc2ySwM_369.440 Anthoceros agrestis HOM05D007245 ORTHO05D009049 9.2e-07 58.2 164 34.1
Psat3g091920 Pisum sativum HOM05D007245 ORTHO05D009049 1.2e-06 57.8 99 51.5


User provided reference genes

Program Settings