Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.16G035800 Glycine max HOM05D005516 ORTHO05D006713 2.9e-85 318.5 164 100.0
Phvul.001G105600 Phaseolus vulgaris HOM05D005516 ORTHO05D006713 1.2e-62 243.4 146 85.6
Glyma.19G117300 Glycine max HOM05D005516 ORTHO05D006713 1.3e-61 240.0 146 85.6
VMungo1383G1686 Vigna mungo HOM05D005516 ORTHO05D006713 8.0e-59 230.7 146 80.1
Ca_08316_v3 Cicer arietinum L. HOM05D005516 ORTHO05D006713 9.1e-55 217.2 151 77.5
Lj1g0004780 Lotus japonicus HOM05D005516 ORTHO05D006713 3.6e-51 205.3 140 77.9
Lalb_Chr14g0364851 Lupinus albus HOM05D005516 ORTHO05D006713 6.1e-51 204.5 152 74.3
Psat3g086560 Pisum sativum HOM05D005516 ORTHO05D006713 2.3e-50 202.6 150 72.0
arahy.Tifrunner.gnm1.ann1.BMR428 Arachis hypogaea HOM05D005516 ORTHO05D006713 1.3e-48 196.8 161 65.2
arahy.Tifrunner.gnm1.ann1.253MNK Arachis hypogaea HOM05D005516 ORTHO05D006713 6.6e-45 184.5 152 65.8
TPR.G34794 Trifolium pratense HOM05D005516 ORTHO05D006713 2.8e-43 179.1 147 66.7
Medtr7g086700 Medicago truncatula HOM05D005516 ORTHO05D006713 9.2e-39 164.1 149 62.4
Dinv13791 Davidia involucrata HOM05D005516 ORTHO05D006713 4.6e-38 161.8 113 70.8
Cfa017721 Carpinus fangiana HOM05D005516 ORTHO05D006713 1.0e-37 160.6 150 62.0
Haze_20402 Corylus avellana HOM05D005516 ORTHO05D006713 8.6e-37 157.5 147 61.9
Hma1.2p1_0526F.1_g172910 Hydrangea macrophylla HOM05D005516 ORTHO05D006713 3.3e-36 155.6 133 61.7
CANSAT78G1214 Cannabis sativa HOM05D005516 ORTHO05D006713 3.6e-35 152.1 147 55.1
Potri.019G040400 Populus trichocarpa HOM05D005516 ORTHO05D006713 3.6e-35 152.1 153 58.2
Duzib106G1703 Durio zibethinus HOM05D005516 ORTHO05D006713 4.7e-35 151.8 152 56.6
vmacro08774 Vaccinium macrocarpon HOM05D005516 ORTHO05D006713 1.4e-34 150.2 128 57.8
CiPaw.09G166400 Carya illinoinensis HOM05D005516 ORTHO05D006713 1.8e-34 149.8 149 56.4
COL.COLO4_20092 Corchorus olitorius HOM05D005516 ORTHO05D006713 1.8e-34 149.8 114 65.8
Manes.08G152800 Manihot esculenta HOM05D005516 ORTHO05D006713 1.2e-33 147.1 131 62.6
AL6G28930 Arabidopsis lyrata HOM05D005516 ORTHO05D006713 1.5e-33 146.7 119 63.9
CSS0003853 Camellia sinensis var. sinensis HOM05D005516 ORTHO05D006713 1.5e-33 146.7 89 77.5
FAN19G1175 Fragaria x ananassa HOM05D005516 ORTHO05D006713 1.5e-33 146.7 147 57.1
vmacro04358 Vaccinium macrocarpon HOM05D005516 ORTHO05D006713 1.5e-33 146.7 130 57.7
Duzib177G0157 Durio zibethinus HOM05D005516 ORTHO05D006713 2.0e-33 146.4 143 57.3
CARHR195330 Cardamine hirsuta HOM05D005516 ORTHO05D006713 2.6e-33 146.0 134 56.7
Ciclev10022543m.g Citrus clementina HOM05D005516 ORTHO05D006713 4.4e-33 145.2 113 66.4
BcaB01g04919 Brassica carinata HOM05D005516 ORTHO05D006713 5.8e-33 144.8 115 62.6
CSS0039228 Camellia sinensis var. sinensis HOM05D005516 ORTHO05D006713 5.8e-33 144.8 86 77.9
FAN23G0165 Fragaria x ananassa HOM05D005516 ORTHO05D006713 5.8e-33 144.8 105 70.5
Thecc.05G241500 Theobroma cacao HOM05D005516 ORTHO05D006713 5.8e-33 144.8 126 61.1
CsaV3_4G031610 Cucumis sativus L. HOM05D005516 ORTHO05D006713 7.5e-33 144.4 147 57.8
FvH4_1g29880 Fragaria vesca HOM05D005516 ORTHO05D006713 7.5e-33 144.4 146 56.8
Hma1.2p1_0526F.1_g172920 Hydrangea macrophylla HOM05D005516 ORTHO05D006713 7.5e-33 144.4 82 82.9
Rhsim08G0097500 Rhododendron simsii HOM05D005516 ORTHO05D006713 7.5e-33 144.4 112 67.0
vmacro18891 Vaccinium macrocarpon HOM05D005516 ORTHO05D006713 7.5e-33 144.4 127 57.5
Lalb_Chr24g0401101 Lupinus albus HOM05D005516 ORTHO05D006713 9.8e-33 144.1 148 60.1
GSVIVG01029962001 Vitis vinifera HOM05D005516 ORTHO05D006713 9.8e-33 144.1 126 62.7
Eucgr.K01534 Eucalyptus grandis HOM05D005516 ORTHO05D006713 1.3e-32 143.7 109 67.9
FAN26G2397 Fragaria x ananassa HOM05D005516 ORTHO05D006713 2.2e-32 142.9 146 56.2
PSO339G3932 Papaver somniferum HOM05D005516 ORTHO05D006713 2.9e-32 142.5 102 65.7
THA.LOC104820795 Tarenaya hassleriana HOM05D005516 ORTHO05D006713 2.9e-32 142.5 128 60.2
Prupe.7G015800 Prunus persica HOM05D005516 ORTHO05D006713 3.7e-32 142.1 150 56.0
ClCG04G004680 Citrullus lanatus HOM05D005516 ORTHO05D006713 4.9e-32 141.7 149 56.4
Actinidia06205 Actinidia chinensis HOM05D005516 ORTHO05D006713 6.4e-32 141.4 147 53.7
PSO384G4582 Papaver somniferum HOM05D005516 ORTHO05D006713 8.3e-32 141.0 109 61.5
Sp6g26410 Schrenkiella parvula HOM05D005516 ORTHO05D006713 8.3e-32 141.0 115 63.5
Potri.013G066000 Populus trichocarpa HOM05D005516 ORTHO05D006713 1.1e-31 140.6 143 56.6
Sed0005064 Sechium edule HOM05D005516 ORTHO05D006713 1.1e-31 140.6 147 56.5
RcHm_v2.0_Chr3g0496031 Rosa chinensis HOM05D005516 ORTHO05D006713 1.4e-31 140.2 150 56.7
Aa31LG11G11740 Aethionema arabicum HOM05D005516 ORTHO05D006713 3.2e-31 139.0 129 54.3
MD14G1009500 Malus domestica HOM05D005516 ORTHO05D006713 3.2e-31 139.0 151 53.6
MD12G1011900 Malus domestica HOM05D005516 ORTHO05D006713 4.1e-31 138.7 151 56.3
CSS0031486 Camellia sinensis var. sinensis HOM05D005516 ORTHO05D006713 5.4e-31 138.3 82 80.5
Duzib128G1828 Durio zibethinus HOM05D005516 ORTHO05D006713 7.0e-31 137.9 143 52.4
Gorai.013G196100 Gossypium raimondii HOM05D005516 ORTHO05D006713 7.0e-31 137.9 81 79.0
Hma1.2p1_0106F.1_g051205 Hydrangea macrophylla HOM05D005516 ORTHO05D006713 7.0e-31 137.9 86 74.4
Carub.0006s1607 Capsella rubella HOM05D005516 ORTHO05D006713 9.2e-31 137.5 121 59.5
MELO3C008865.2 Cucumis melo HOM05D005516 ORTHO05D006713 9.2e-31 137.5 82 80.5
Cc06_g21500 Coffea canephora HOM05D005516 ORTHO05D006713 1.2e-30 137.1 122 59.8
MBI05_g16554_MAGBIO Magnolia biondii HOM05D005516 ORTHO05D006713 1.2e-30 137.1 111 62.2
TWI32G0326 Tripterygium wilfordii HOM05D005516 ORTHO05D006713 1.2e-30 137.1 144 56.2
HanXRQChr13g0406451 Helianthus annuus HOM05D005516 ORTHO05D006713 1.6e-30 136.7 105 66.7
Atru.chr2.1522 Acer truncatum HOM05D005516 ORTHO05D006713 2.7e-30 136.0 83 79.5
DCAR_016961 Daucus carota HOM05D005516 ORTHO05D006713 2.7e-30 136.0 77 79.2
Lsat_1_v5_gn_5_154420 Lactuca sativa HOM05D005516 ORTHO05D006713 2.7e-30 136.0 102 65.7
Peaxi162Scf00575g00619 Petunia axillaris HOM05D005516 ORTHO05D006713 2.7e-30 136.0 100 66.0
Sabra13G0057700 Salix brachista HOM05D005516 ORTHO05D006713 2.7e-30 136.0 151 53.0
QL07p017420 Quercus lobata HOM05D005516 ORTHO05D006713 3.5e-30 135.6 91 71.4
Sc07g0007460 Simmondsia chinensis HOM05D005516 ORTHO05D006713 3.5e-30 135.6 111 65.8
Thhalv10014907m.g Eutrema salsugineum HOM05D005516 ORTHO05D006713 4.6e-30 135.2 134 58.2
C02p25840 Brassica napus HOM05D005516 ORTHO05D006713 1.0e-29 134.0 107 62.6
AT5G17840 Arabidopsis thaliana HOM05D005516 ORTHO05D006713 1.3e-29 133.7 125 56.0
TWI60G0181 Tripterygium wilfordii HOM05D005516 ORTHO05D006713 1.3e-29 133.7 146 52.7
CAN.G128.137 Capsicum annuum HOM05D005516 ORTHO05D006713 1.7e-29 133.3 98 64.3
CDE07G0498 Ceratophyllum demersum HOM05D005516 ORTHO05D006713 1.7e-29 133.3 109 58.7
Hund20711 Selenicereus undatus HOM05D005516 ORTHO05D006713 2.3e-29 132.9 86 70.9
PGSC0003DMG400028211 Solanum tuberosum HOM05D005516 ORTHO05D006713 2.3e-29 132.9 96 65.6
SGA_v2.0_scaffold66G22373 Striga asiatica HOM05D005516 ORTHO05D006713 2.3e-29 132.9 105 63.8
Sopen10g031880 Solanum pennellii HOM05D005516 ORTHO05D006713 3.9e-29 132.1 136 52.2
BcaB01g05159 Brassica carinata HOM05D005516 ORTHO05D006713 5.0e-29 131.7 107 60.7
A03p08520 Brassica napus HOM05D005516 ORTHO05D006713 5.0e-29 131.7 107 61.7
C03p09930 Brassica napus HOM05D005516 ORTHO05D006713 5.0e-29 131.7 107 60.7
BolC3t13481H Brassica oleracea HOM05D005516 ORTHO05D006713 5.0e-29 131.7 107 60.7
BraA03t10176Z Brassica rapa HOM05D005516 ORTHO05D006713 5.0e-29 131.7 107 60.7
ECA248G2342 Erigeron canadensis HOM05D005516 ORTHO05D006713 5.0e-29 131.7 110 61.8
Solyc10g081380.2 Solanum lycopersicum HOM05D005516 ORTHO05D006713 2.5e-28 129.4 131 53.4
DCAR_020653 Daucus carota HOM05D005516 ORTHO05D006713 3.3e-28 129.0 102 64.7
Oeu044207.1 Olea europaea HOM05D005516 ORTHO05D006713 4.3e-28 128.6 115 61.7
SGA_v2.0_scaffold69G23215 Striga asiatica HOM05D000039 ORTHO05D000370 4.3e-28 128.6 143 53.1
Gorai.004G252300 Gossypium raimondii HOM05D005516 ORTHO05D006713 5.6e-28 128.3 144 52.8
Zm00001eb052720 Zea mays HOM05D005516 ORTHO05D006713 5.6e-28 128.3 80 75.0
Gohir.A08G219566 Gossypium hirsutum HOM05D005516 ORTHO05D006713 1.6e-27 126.7 136 54.4
MSTRG.6254 Avicennia marina HOM05D005516 ORTHO05D006713 2.8e-27 125.9 102 63.7
Nitab4.5_0000613g0140 Nicotiana tabacum HOM05D005516 ORTHO05D006713 2.8e-27 125.9 132 53.0
Hund20712 Selenicereus undatus HOM05D005516 ORTHO05D006713 6.2e-27 124.8 82 70.7
Nitab4.5_0000811g0010 Nicotiana tabacum HOM05D005516 ORTHO05D006713 1.4e-26 123.6 78 74.4
HPP92_000977 Vanilla planifolia HOM05D005516 ORTHO05D006713 3.1e-26 122.5 115 53.9
unitig_0.g583 Utricularia gibba HOM05D005516 ORTHO05D006713 6.8e-26 121.3 80 76.2
HPP92_001001 Vanilla planifolia HOM05D005516 ORTHO05D006713 6.8e-26 121.3 115 53.0
MSTRG.26204 Avicennia marina HOM05D005516 ORTHO05D006713 1.5e-25 120.2 97 64.9
Cpa.g.sc161.38 Carica papaya HOM05D005516 ORTHO05D006713 2.6e-25 119.4 76 75.0
AUR62018088 Chenopodium quinoa HOM05D005516 ORTHO05D006713 2.6e-25 119.4 83 67.5
Gohir.A13G161100 Gossypium hirsutum HOM05D005516 ORTHO05D006713 2.6e-25 119.4 113 58.4
Nitab4.5_0000404g0040 Nicotiana tabacum HOM05D005516 ORTHO05D006713 3.4e-25 119.0 80 70.0
Os03g0656201 Oryza sativa ssp. japonica HOM05D005516 ORTHO05D006713 7.5e-25 117.9 78 70.5
SEGI_32239 Sequoiadendron giganteum HOM05D005516 ORTHO05D006713 9.9e-25 117.5 100 58.0
EL10Ac3g06621 Beta vulgaris HOM05D005516 ORTHO05D006713 2.9e-24 115.9 112 55.4
Zm00001eb218270 Zea mays HOM05D005516 ORTHO05D006713 2.9e-24 115.9 105 57.1
Gohir.D13G166400 Gossypium hirsutum HOM05D005516 ORTHO05D006713 6.4e-24 114.8 134 51.5
AUR62032011 Chenopodium quinoa HOM05D005516 ORTHO05D006713 1.9e-23 113.2 139 47.5
BcaB05g23282 Brassica carinata HOM05D005516 ORTHO05D006713 3.2e-23 112.5 98 62.2
Pp3c8_890 Physcomitrium patens HOM05D005516 ORTHO05D006713 3.2e-23 112.5 84 66.7
Ah.13g074870 Amaranthus hybridus HOM05D005516 ORTHO05D006713 7.1e-23 111.3 89 60.7
Aqoxy1G00508 Aquilegia oxysepala HOM05D005516 ORTHO05D006713 2.1e-22 109.8 134 50.0
Actinidia07963 Actinidia chinensis HOM05D005516 ORTHO05D006713 3.3e-20 102.4 128 48.4
Mapoly0020s0169 Marchantia polymorpha HOM05D005516 ORTHO05D006713 6.2e-19 98.2 133 43.6
SalBow6G3354 Salvia bowleyana HOM05D005516 ORTHO05D006713 4.4e-17 92.0 63 68.3
Peaxi162Scf00575g00620 Petunia axillaris HOM05D005516 ORTHO05D006713 2.2e-16 89.7 129 45.0
Sed0000674 Sechium edule HOM05D005516 ORTHO05D006713 6.4e-16 88.2 91 54.9
Ciclev10013836m.g Citrus clementina HOM05D005516 ORTHO05D006713 3.2e-15 85.9 59 66.1
BcaC03g15036 Brassica carinata HOM05D005516 ORTHO05D006713 4.2e-15 85.5 80 53.8
BolC2t08658H Brassica oleracea HOM05D005516 ORTHO05D006713 4.2e-15 85.5 80 53.8
Gohir.D02G044500 Gossypium hirsutum HOM05D005516 ORTHO05D006713 7.1e-15 84.7 62 61.3
Oeu029775.1 Olea europaea HOM05D005516 ORTHO05D006713 7.8e-14 81.3 110 48.2
TAR633G1766 Trochodendron aralioides HOM05D005516 ORTHO05D006713 3.9e-13 79.0 108 46.3
Gohir.A06G040900 Gossypium hirsutum HOM05D005516 ORTHO05D006713 5.1e-13 78.6 59 61.0
Gohir.D05G109301 Gossypium hirsutum HOM05D005516 ORTHO05D006713 5.1e-13 78.6 59 61.0
Nn6g32378 Nelumbo nucifera HOM05D005516 ORTHO05D006713 1.8e-10 70.1 77 51.9
CBR_g28089 Chara braunii HOM05D005516 ORTHO05D006713 2.4e-10 69.7 52 57.7
SMO367G1142 Selaginella moellendorffii HOM05D005516 ORTHO05D006713 4.9e-08 62.0 39 66.7
Sabra19G0050600 Salix brachista HOM05D005516 ORTHO05D006713 1.6e-06 57.0 111 36.9
BolC2t06845H Brassica oleracea HOM05D005516 ORTHO05D006713 6.0e-06 55.1 67 49.3


User provided reference genes

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