Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.16G034400 Glycine max HOM05D004497 ORTHO05D005539 2.4e-254 881.7 447 100.0
VMungo0331G1674 Vigna mungo HOM05D004497 ORTHO05D005539 3.7e-199 698.4 448 80.4
Glyma.07G068400 Glycine max HOM05D004497 ORTHO05D005539 2.7e-194 682.2 359 94.4
Ca_04603_v3 Cicer arietinum L. HOM05D004497 ORTHO05D005539 8.0e-194 680.6 446 77.8
Phvul.003G017500 Phaseolus vulgaris HOM05D004497 ORTHO05D005539 6.7e-193 677.6 440 79.8
Ca_09070_v3 Cicer arietinum L. HOM05D004497 ORTHO05D005539 2.0e-184 649.4 415 78.8
Lj1g0020744 Lotus japonicus HOM05D004497 ORTHO05D005539 3.1e-182 642.1 415 78.1
Psat3g028160 Pisum sativum HOM05D004497 ORTHO05D005539 4.7e-178 628.2 411 76.4
arahy.Tifrunner.gnm1.ann1.0L2FVX Arachis hypogaea HOM05D004497 ORTHO05D005539 4.4e-176 621.7 430 73.5
arahy.Tifrunner.gnm1.ann1.16KDXT Arachis hypogaea HOM05D004497 ORTHO05D005539 7.5e-176 620.9 429 73.4
Medtr7g106650 Medicago truncatula HOM05D004497 ORTHO05D005539 9.8e-176 620.5 415 75.2
TPR.G34454 Trifolium pratense HOM05D004497 ORTHO05D005539 1.3e-175 620.2 432 73.1
Lalb_Chr03g0040831 Lupinus albus HOM05D004497 ORTHO05D005539 1.7e-175 619.8 449 71.3
CiPaw.08G116800 Carya illinoinensis HOM05D004497 ORTHO05D005539 1.9e-155 553.1 452 62.4
Atru.chr3.3406 Acer truncatum HOM05D004497 ORTHO05D005539 1.4e-153 547.0 416 66.3
Cfa013402 Carpinus fangiana HOM05D004497 ORTHO05D005539 1.8e-153 546.6 391 66.8
HanXRQChr05g0153981 Helianthus annuus HOM05D004497 ORTHO05D005539 6.8e-153 544.7 390 66.7
Haze_07247 Corylus avellana HOM05D004497 ORTHO05D005539 1.2e-152 543.9 363 69.7
QL10p004476 Quercus lobata HOM05D004497 ORTHO05D005539 2.0e-152 543.1 400 67.2
RcHm_v2.0_Chr7g0190661 Rosa chinensis HOM05D004497 ORTHO05D005539 2.6e-152 542.7 400 66.2
Thecc.03G125300 Theobroma cacao HOM05D004497 ORTHO05D005539 9.8e-152 540.8 395 66.6
Gohir.A09G246200 Gossypium hirsutum HOM05D004497 ORTHO05D005539 1.7e-151 540.0 400 66.8
COL.COLO4_28066 Corchorus olitorius HOM05D004497 ORTHO05D005539 6.4e-151 538.1 395 65.8
Duzib205G0501 Durio zibethinus HOM05D004497 ORTHO05D005539 8.3e-151 537.7 398 65.3
Gohir.D09G246800 Gossypium hirsutum HOM05D004497 ORTHO05D005539 8.3e-151 537.7 416 64.7
Nitab4.5_0002978g0150 Nicotiana tabacum HOM05D004497 ORTHO05D005539 1.1e-150 537.3 411 64.2
QL93p0225_0015 Quercus lobata HOM05D004497 ORTHO05D005539 2.4e-150 536.2 400 66.5
Actinidia25597 Actinidia chinensis HOM05D004497 ORTHO05D005539 1.2e-149 533.9 416 63.5
QL07p000007 Quercus lobata HOM05D004497 ORTHO05D005539 1.2e-149 533.9 400 66.2
QL04p081834 Quercus lobata HOM05D004497 ORTHO05D005539 2.7e-149 532.7 414 65.2
FvH4_5g07760 Fragaria vesca HOM05D004497 ORTHO05D005539 3.5e-149 532.3 414 65.2
Lsat_1_v5_gn_5_13520 Lactuca sativa HOM05D004497 ORTHO05D005539 3.5e-149 532.3 385 66.8
FAN18G2816 Fragaria x ananassa HOM05D004497 ORTHO05D005539 7.8e-149 531.2 414 65.0
FAN04G2053 Fragaria x ananassa HOM05D004497 ORTHO05D005539 1.0e-148 530.8 414 65.2
FAN08G0052 Fragaria x ananassa HOM05D004497 ORTHO05D005539 1.0e-148 530.8 414 65.5
TWI14G0260 Tripterygium wilfordii HOM05D004497 ORTHO05D005539 1.3e-148 530.4 416 62.0
Gorai.006G271300 Gossypium raimondii HOM05D004497 ORTHO05D005539 1.7e-148 530.0 400 66.0
Nitab4.5_0000903g0080 Nicotiana tabacum HOM05D004497 ORTHO05D005539 3.9e-148 528.9 374 66.3
GSVIVG01013111001 Vitis vinifera HOM05D004497 ORTHO05D005539 5.1e-148 528.5 382 67.5
TAR625G0069 Trochodendron aralioides HOM05D004497 ORTHO05D005539 5.6e-147 525.0 412 63.8
Rhsim08G0187300 Rhododendron simsii HOM05D004497 ORTHO05D005539 9.5e-147 524.2 440 60.2
MD06G1147200 Malus domestica HOM05D004497 ORTHO05D005539 2.3e-145 519.6 398 65.3
Potri.012G095100 Populus trichocarpa HOM05D004497 ORTHO05D005539 6.8e-145 518.1 391 65.5
CANSAT56G3508 Cannabis sativa HOM05D004497 ORTHO05D005539 8.9e-145 517.7 421 62.0
CSS0032894 Camellia sinensis var. sinensis HOM05D004497 ORTHO05D005539 1.2e-144 517.3 399 64.7
Potri.015G092400 Populus trichocarpa HOM05D004497 ORTHO05D005539 3.4e-144 515.8 392 65.1
TAR629G1275 Trochodendron aralioides HOM05D004497 ORTHO05D005539 7.5e-144 514.6 422 62.1
CsaV3_1G009480 Cucumis sativus L. HOM05D004497 ORTHO05D005539 1.3e-143 513.8 404 63.9
MD14G1161100 Malus domestica HOM05D004497 ORTHO05D005539 1.3e-143 513.8 423 62.6
Ciclev10020238m.g Citrus clementina HOM05D004497 ORTHO05D005539 1.7e-143 513.5 398 64.6
Gohir.A12G276900 Gossypium hirsutum HOM05D004497 ORTHO05D005539 1.7e-143 513.5 360 67.8
ECA246G4485 Erigeron canadensis HOM05D004497 ORTHO05D005539 3.7e-143 512.3 476 56.1
Eucgr.C01065 Eucalyptus grandis HOM05D004497 ORTHO05D005539 3.7e-143 512.3 431 60.3
Migut.I00519 Erythranthe guttata HOM05D004497 ORTHO05D005539 4.1e-142 508.8 396 64.6
Sabra15G0114200 Salix brachista HOM05D004497 ORTHO05D005539 4.1e-142 508.8 412 62.4
SGA_v2.0_scaffold215G42316 Striga asiatica HOM05D004497 ORTHO05D005539 7.1e-142 508.1 414 62.3
vmacro20468 Vaccinium macrocarpon HOM05D004497 ORTHO05D005539 1.2e-141 507.3 461 56.2
PGSC0003DMG400005828 Solanum tuberosum HOM05D004497 ORTHO05D005539 7.8e-141 504.6 369 65.6
Sc10g0010400 Simmondsia chinensis HOM05D004497 ORTHO05D005539 5.1e-140 501.9 359 65.2
Peaxi162Scf00078g00424 Petunia axillaris HOM05D004497 ORTHO05D005539 6.6e-140 501.5 339 69.6
SalBow8G1477 Salvia bowleyana HOM05D004497 ORTHO05D005539 2.5e-139 499.6 417 62.1
Eucgr.K00186 Eucalyptus grandis HOM05D004497 ORTHO05D005539 4.3e-139 498.8 431 59.2
ClCG03G003620 Citrullus lanatus HOM05D004497 ORTHO05D005539 5.6e-139 498.4 413 61.0
Sed0020059 Sechium edule HOM05D004497 ORTHO05D005539 1.2e-138 497.3 391 63.2
Sopen08g004010 Solanum pennellii HOM05D004497 ORTHO05D005539 1.2e-138 497.3 419 59.9
Lj9A476T57 Lonicera japonica HOM05D004497 ORTHO05D005539 1.6e-138 496.9 340 68.2
Hund03342 Selenicereus undatus HOM05D004497 ORTHO05D005539 2.1e-138 496.5 355 66.5
Solyc08g008160.4 Solanum lycopersicum HOM05D004497 ORTHO05D005539 2.1e-138 496.5 419 60.1
PGR083G2085 Punica granatum HOM05D004497 ORTHO05D005539 1.1e-137 494.2 431 59.9
MSTRG.22910 Avicennia marina HOM05D004497 ORTHO05D005539 2.4e-137 493.0 410 61.0
FAN13G1359 Fragaria x ananassa HOM05D004497 ORTHO05D005539 3.1e-137 492.7 404 61.9
THA.LOC104820611 Tarenaya hassleriana HOM05D004497 ORTHO05D005539 3.4e-136 489.2 358 66.5
Nn4g26409 Nelumbo nucifera HOM05D004497 ORTHO05D005539 5.8e-136 488.4 421 60.3
SalBow5G0098 Salvia bowleyana HOM05D004497 ORTHO05D005539 1.7e-135 486.9 443 58.7
SalBow5G4825 Salvia bowleyana HOM05D004497 ORTHO05D005539 1.7e-135 486.9 443 58.7
PSO063G4711 Papaver somniferum HOM05D004497 ORTHO05D005539 2.2e-135 486.5 397 62.2
PSO782G0077 Papaver somniferum HOM05D004497 ORTHO05D005539 4.9e-135 485.3 397 62.2
Ah.08g212900 Amaranthus hybridus HOM05D004497 ORTHO05D005539 8.4e-135 484.6 402 61.7
Manes.14G053800 Manihot esculenta HOM05D004497 ORTHO05D005539 2.4e-134 483.0 349 66.8
MELO3C002347.2 Cucumis melo HOM05D004497 ORTHO05D005539 3.2e-134 482.6 340 67.6
Aqoxy5G03475 Aquilegia oxysepala HOM05D004497 ORTHO05D005539 5.4e-134 481.9 363 61.2
MBI11_g15865_MAGBIO Magnolia biondii HOM05D004497 ORTHO05D005539 5.4e-134 481.9 357 64.7
Cc05_g04600 Coffea canephora HOM05D004497 ORTHO05D005539 7.1e-134 481.5 414 60.1
Carub.0001s2754 Capsella rubella HOM05D004497 ORTHO05D005539 4.3e-131 472.2 397 60.5
EL10As4g23444 Beta vulgaris HOM05D004497 ORTHO05D005539 1.2e-130 470.7 412 59.2
Dinv11148 Davidia involucrata HOM05D004497 ORTHO05D005539 1.2e-130 470.7 400 61.5
THA.LOC104814264 Tarenaya hassleriana HOM05D004497 ORTHO05D005539 6.2e-130 468.4 355 63.1
AL1G43130 Arabidopsis lyrata HOM05D004497 ORTHO05D005539 3.1e-129 466.1 399 59.4
Thhalv10007651m.g Eutrema salsugineum HOM05D004497 ORTHO05D005539 5.3e-129 465.3 427 56.0
Oeu005018.3 Olea europaea HOM05D004497 ORTHO05D005539 1.2e-128 464.2 458 54.4
Dinv04858 Davidia involucrata HOM05D004497 ORTHO05D005539 2.0e-128 463.4 321 68.5
Aa31LG6G6220 Aethionema arabicum HOM05D004497 ORTHO05D005539 4.4e-128 462.2 425 56.9
AT1G29320 Arabidopsis thaliana HOM05D004497 ORTHO05D005539 9.9e-128 461.1 399 58.4
CARHR028640 Cardamine hirsuta HOM05D004497 ORTHO05D005539 4.9e-127 458.8 393 58.3
A08p25140 Brassica napus HOM05D004497 ORTHO05D005539 1.1e-126 457.6 380 58.9
BolC3t19835H Brassica oleracea HOM05D004497 ORTHO05D005539 1.4e-126 457.2 383 58.7
C03p75750 Brassica napus HOM05D004497 ORTHO05D005539 5.4e-126 455.3 355 61.4
BolC5t31537H Brassica oleracea HOM05D004497 ORTHO05D005539 2.7e-125 453.0 369 59.1
BraA09t39216Z Brassica rapa HOM05D004497 ORTHO05D005539 2.7e-125 453.0 355 60.8
CDE08G0729 Ceratophyllum demersum HOM05D004497 ORTHO05D005539 4.6e-125 452.2 414 55.6
BcaC01g00099 Brassica carinata HOM05D004497 ORTHO05D005539 6.0e-125 451.8 355 61.4
BcaC05g26958 Brassica carinata HOM05D004497 ORTHO05D005539 7.8e-125 451.4 355 60.8
C05p28100 Brassica napus HOM05D004497 ORTHO05D005539 7.8e-125 451.4 355 60.8
Sp1g25270 Schrenkiella parvula HOM05D004497 ORTHO05D005539 7.8e-125 451.4 437 54.2
BcaB03g12154 Brassica carinata HOM05D004497 ORTHO05D005539 1.9e-123 446.8 356 61.5
Prupe.1G584300 Prunus persica HOM05D004497 ORTHO05D005539 9.6e-123 444.5 411 57.9
A09p36980 Brassica napus HOM05D004497 ORTHO05D005539 2.1e-122 443.4 369 58.0
BcaB07g32523 Brassica carinata HOM05D004497 ORTHO05D005539 2.4e-121 439.9 357 61.3
CiPaw.11G010200 Carya illinoinensis HOM05D004497 ORTHO05D005539 2.2e-119 433.3 324 64.5
BraA08t34469Z Brassica rapa HOM05D004497 ORTHO05D005539 4.9e-119 432.2 466 50.0
Cfa014010 Carpinus fangiana HOM05D004497 ORTHO05D005539 1.1e-118 431.0 447 53.5
TWI39G1139 Tripterygium wilfordii HOM05D004497 ORTHO05D005539 9.3e-118 427.9 454 50.9
AUR62025903 Chenopodium quinoa HOM05D004497 ORTHO05D005539 1.0e-116 424.5 396 55.6
DCAR_012679 Daucus carota HOM05D004497 ORTHO05D005539 6.7e-116 421.8 361 57.9
Zm00001eb105680 Zea mays HOM05D004497 ORTHO05D005539 1.6e-114 417.2 382 54.5
Cpa.g.sc166.23 Carica papaya HOM05D004497 ORTHO05D005539 3.7e-114 416.0 291 67.4
SEGI_30468 Sequoiadendron giganteum HOM05D004497 ORTHO05D005539 5.3e-113 412.1 432 47.9
ATR0171G018 Amborella trichopoda HOM05D004497 ORTHO05D005539 3.4e-112 409.5 420 50.5
HPP92_023861 Vanilla planifolia HOM05D004497 ORTHO05D005539 5.8e-112 408.7 357 53.8
Duzib068G0683 Durio zibethinus HOM05D004497 ORTHO05D005539 7.9e-109 398.3 291 65.3
AUR62025086 Chenopodium quinoa HOM05D004497 ORTHO05D005539 1.1e-107 394.4 344 58.1
Sed0003097 Sechium edule HOM05D004497 ORTHO05D005539 6.9e-105 385.2 285 67.0
AUR62032705 Chenopodium quinoa HOM05D004497 ORTHO05D005539 1.4e-102 377.5 427 48.5
SHI10599 Sapria himalayana HOM05D004497 ORTHO05D005539 1.1e-97 361.3 322 54.3
Aqoxy5G03495 Aquilegia oxysepala HOM05D004497 ORTHO05D005539 1.4e-94 350.9 293 55.6
Sabra12G0069700 Salix brachista HOM05D004497 ORTHO05D005539 4.6e-93 345.9 294 58.8
unitig_699.g19657 Utricularia gibba HOM05D004497 ORTHO05D005539 4.8e-90 335.9 423 46.1
Mapoly0079s0016 Marchantia polymorpha HOM05D004497 ORTHO05D005539 1.0e-87 328.2 448 41.7
AUR62025094 Chenopodium quinoa HOM05D004497 ORTHO05D005539 3.0e-84 316.6 291 54.6
Nitab4.5_0003013g0030 Nicotiana tabacum HOM05D004497 ORTHO05D005539 8.8e-84 315.1 412 45.9
Pp3c13_24500 Physcomitrium patens HOM05D004497 ORTHO05D005539 4.4e-83 312.8 430 41.6
SMO165G0173 Selaginella moellendorffii HOM05D004497 ORTHO05D005539 1.7e-79 300.8 406 42.9
Os07g0506700 Oryza sativa ssp. japonica HOM05D004497 ORTHO05D005539 1.8e-76 290.8 295 49.5
Zm00001eb322320 Zea mays HOM05D004497 ORTHO05D005539 1.9e-70 270.8 200 61.0
vmacro19222 Vaccinium macrocarpon HOM05D004497 ORTHO05D005539 1.4e-68 264.6 347 43.5
Ca_16680_v3 Cicer arietinum L. HOM05D000160 ORTHO05D000496 2.2e-58 230.7 166 66.9
RcHm_v2.0_Chr0c30g0501231 Rosa chinensis HOM05D004497 ORTHO05D005539 4.1e-57 226.5 360 41.7
RcHm_v2.0_Chr3g0452771 Rosa chinensis HOM05D004497 ORTHO05D005539 4.1e-57 226.5 360 41.7
Actinidia19491 Actinidia chinensis HOM05D004497 ORTHO05D005539 5.4e-57 226.1 324 41.7
AUR62029644 Chenopodium quinoa HOM05D004497 ORTHO05D005539 1.2e-56 224.9 229 53.7
AagrBONN_evm.TU.Sc2ySwM_344.3271 Anthoceros agrestis HOM05D000006 ORTHO05D004030 1.1e-54 218.4 302 42.4
SalBow8G1815 Salvia bowleyana HOM05D004497 ORTHO05D005539 1.2e-51 208.4 182 63.2
AUR62025088 Chenopodium quinoa HOM05D004497 ORTHO05D005539 5.2e-44 183.0 230 45.2
CBR_g31949 Chara braunii HOM05D004497 ORTHO05D005539 4.4e-43 179.9 448 32.6
RcHm_v2.0_Chr5g0041021 Rosa chinensis HOM05D004497 ORTHO05D005539 1.4e-41 174.9 369 35.8
AUR62025079 Chenopodium quinoa HOM05D004497 ORTHO05D005539 6.4e-34 149.4 121 57.0
Phvul.003G017700 Phaseolus vulgaris HOM05D004497 ORTHO05D005539 3.5e-24 117.1 75 81.3
MCO03G018 Micromonas commoda HOM05D004497 ORTHO05D005539 5.1e-23 113.2 374 27.5
Gohir.D13G181701 Gossypium hirsutum HOM05D004497 ORTHO05D005539 3.3e-22 110.5 102 52.0
TAR371G1248 Trochodendron aralioides HOM05D004497 ORTHO05D005539 4.0e-20 103.6 122 46.7
Cre17.g718650 Chlamydomonas reinhardtii HOM05D004497 ORTHO05D005539 9.9e-19 99.0 386 24.6
PRCOL_00003967 Prasinoderma coloniale HOM05D004497 ORTHO05D005539 4.6e-16 90.1 182 33.0
AUR62025092 Chenopodium quinoa HOM05D004497 ORTHO05D005539 6.0e-16 89.7 53 77.4
Oeu006698.1 Olea europaea HOM05D004497 ORTHO05D005539 3.3e-14 84.0 71 56.3
C04p39580 Brassica napus HOM05D004497 ORTHO05D005539 9.6e-14 82.4 85 49.4
BolC4t25523H Brassica oleracea HOM05D004497 ORTHO05D005539 9.6e-14 82.4 85 49.4
COL.COLO4_36170 Corchorus olitorius HOM05D021494 ORTHO05D022415 4.9e-10 70.1 86 47.7
arahy.Tifrunner.gnm1.ann1.FTJQ4M Arachis hypogaea HOM05D004497 ORTHO05D005539 1.2e-08 65.5 55 60.0
Glyma.02G139950 Glycine max HOM05D002163 ORTHO05D002386 2.5e-06 57.8 29 89.7


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