Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.16G028500 Glycine max HOM05D006993 ORTHO05D008336 6.9e-95 350.9 214 100.0
Glyma.07G059600 Glycine max HOM05D006993 ORTHO05D008336 3.1e-87 325.5 217 90.8
VMungo0331G1491 Vigna mungo HOM05D006993 ORTHO05D008336 1.4e-82 310.1 217 88.0
Lj3g0006688 Lotus japonicus HOM05D006993 ORTHO05D008336 2.5e-81 305.8 215 80.9
Phvul.010G110000 Phaseolus vulgaris HOM05D006993 ORTHO05D008336 6.3e-80 301.2 212 88.2
Medtr8g028100 Medicago truncatula HOM05D006993 ORTHO05D008336 7.7e-78 294.3 215 74.9
Ca_23580_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 2.2e-77 292.7 215 86.0
TPR.G5057 Trifolium pratense HOM05D006993 ORTHO05D008336 8.5e-77 290.8 215 74.0
arahy.Tifrunner.gnm1.ann1.RC1IE0 Arachis hypogaea HOM05D006993 ORTHO05D008336 2.6e-70 269.2 221 81.4
Lalb_Chr17g0342261 Lupinus albus HOM05D006993 ORTHO05D008336 5.5e-68 261.5 217 68.7
Ciclev10016771m.g Citrus clementina HOM05D006993 ORTHO05D008336 1.3e-53 213.8 209 63.6
CiPaw.13G058900 Carya illinoinensis HOM05D006993 ORTHO05D008336 2.5e-52 209.5 219 62.1
Manes.13G058300 Manihot esculenta HOM05D006993 ORTHO05D008336 5.5e-52 208.4 207 58.5
FvH4_5g27060 Fragaria vesca HOM05D006993 ORTHO05D008336 3.4e-49 199.1 183 61.2
TWI18G0796 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 4.4e-49 198.7 212 59.4
Ca_23571_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 5.7e-49 198.4 160 86.9
CSS0002802 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 7.5e-49 198.0 215 63.7
FAN08G3673 Fragaria x ananassa HOM05D006993 ORTHO05D008336 9.8e-49 197.6 161 66.5
Psat4g158880 Pisum sativum HOM05D006993 ORTHO05D008336 1.3e-48 197.2 164 67.7
Potri.014G172800 Populus trichocarpa HOM05D006993 ORTHO05D008336 2.2e-48 196.4 205 60.0
GSVIVG01006115001 Vitis vinifera HOM05D006993 ORTHO05D008336 4.9e-48 195.3 159 64.2
Cpa.g.sc8.8 Carica papaya HOM05D006993 ORTHO05D008336 8.3e-48 194.5 209 60.3
QL09p044784 Quercus lobata HOM05D006993 ORTHO05D008336 1.1e-47 194.1 177 61.0
Atru.chr6.3467 Acer truncatum HOM05D006993 ORTHO05D008336 1.4e-47 193.7 219 58.0
CANSAT11G1969 Cannabis sativa HOM05D006993 ORTHO05D008336 1.4e-47 193.7 216 53.7
FAN13G2105 Fragaria x ananassa HOM05D006993 ORTHO05D008336 1.8e-47 193.4 183 72.1
PGR083G2302 Punica granatum HOM05D006993 ORTHO05D008336 2.4e-47 193.0 211 67.3
Sabra14G0132300 Salix brachista HOM05D006993 ORTHO05D008336 2.4e-47 193.0 205 60.0
Gohir.A11G146100 Gossypium hirsutum HOM05D006993 ORTHO05D008336 3.1e-47 192.6 214 54.7
Gorai.007G162900 Gossypium raimondii HOM05D006993 ORTHO05D008336 3.1e-47 192.6 214 54.7
Duzib138G1606 Durio zibethinus HOM05D006993 ORTHO05D008336 5.4e-47 191.8 225 55.6
MD15G1141400 Malus domestica HOM05D006993 ORTHO05D008336 5.4e-47 191.8 108 82.4
CSS0028614 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 9.2e-47 191.0 215 63.3
FAN04G3061 Fragaria x ananassa HOM05D006993 ORTHO05D008336 9.2e-47 191.0 161 78.3
TAR626G0971 Trochodendron aralioides HOM05D006993 ORTHO05D008336 9.2e-47 191.0 200 53.0
Cfa010616 Carpinus fangiana HOM05D006993 ORTHO05D008336 1.2e-46 190.7 155 72.3
Duzib211G0651 Durio zibethinus HOM05D006993 ORTHO05D008336 1.6e-46 190.3 111 82.0
Eucgr.H00675 Eucalyptus grandis HOM05D006993 ORTHO05D008336 1.6e-46 190.3 214 61.2
Nn1g08444 Nelumbo nucifera HOM05D006993 ORTHO05D008336 1.6e-46 190.3 159 73.6
Oeu049571.1 Olea europaea HOM05D006993 ORTHO05D008336 1.6e-46 190.3 207 58.9
Cc01_g15720 Coffea canephora HOM05D006993 ORTHO05D008336 2.0e-46 189.9 217 60.4
Prupe.5G011000 Prunus persica HOM05D006993 ORTHO05D008336 2.7e-46 189.5 165 62.4
FAN18G3928 Fragaria x ananassa HOM05D006993 ORTHO05D008336 5.9e-46 188.3 161 65.2
MD00G1144800 Malus domestica HOM05D006993 ORTHO05D008336 5.9e-46 188.3 162 61.7
ATR0751G064 Amborella trichopoda HOM05D006993 ORTHO05D008336 7.7e-46 188.0 158 58.9
PSO675G6922 Papaver somniferum HOM05D006993 ORTHO05D008336 7.7e-46 188.0 176 54.5
MSTRG.18520 Avicennia marina HOM05D006993 ORTHO05D008336 1.0e-45 187.6 159 61.0
Lsat_1_v5_gn_9_15700 Lactuca sativa HOM05D006993 ORTHO05D008336 1.0e-45 187.6 179 56.4
COL.COLO4_19719 Corchorus olitorius HOM05D006993 ORTHO05D008336 1.3e-45 187.2 224 54.9
Oeu013422.3 Olea europaea HOM05D006993 ORTHO05D008336 1.3e-45 187.2 208 52.9
PSO541G2665 Papaver somniferum HOM05D006993 ORTHO05D008336 1.3e-45 187.2 178 56.2
CSS0020795 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 1.7e-45 186.8 206 52.9
Peaxi162Scf12724g00016 Petunia axillaris HOM05D006993 ORTHO05D008336 1.7e-45 186.8 217 62.2
AL3G41710 Arabidopsis lyrata HOM05D006993 ORTHO05D008336 2.9e-45 186.0 208 51.0
RcHm_v2.0_Chr7g0218061 Rosa chinensis HOM05D006993 ORTHO05D008336 2.9e-45 186.0 161 77.6
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 3.8e-45 185.7 160 71.2
PGSC0003DMG400020288 Solanum tuberosum HOM05D006993 ORTHO05D008336 3.8e-45 185.7 192 68.2
CAN.G3.14 Capsicum annuum HOM05D006993 ORTHO05D008336 6.6e-45 184.9 108 82.4
Lj2A1109T68 Lonicera japonica HOM05D006993 ORTHO05D008336 6.6e-45 184.9 111 76.6
Actinidia23138 Actinidia chinensis HOM05D006993 ORTHO05D008336 1.1e-44 184.1 208 51.9
Thecc.01G203600 Theobroma cacao HOM05D006993 ORTHO05D008336 1.1e-44 184.1 229 49.8
DCAR_018599 Daucus carota HOM05D000190 ORTHO05D008336 1.9e-44 183.3 160 69.4
Aa31sc249G30 Aethionema arabicum HOM05D006993 ORTHO05D008336 2.5e-44 183.0 208 52.4
Sopen09g012650 Solanum pennellii HOM05D006993 ORTHO05D008336 5.6e-44 181.8 185 60.5
Potri.002G217400 Populus trichocarpa HOM05D006993 ORTHO05D008336 7.3e-44 181.4 205 58.0
EL10Ac5g10566 Beta vulgaris HOM05D006993 ORTHO05D008336 9.5e-44 181.0 198 60.1
Aqoxy4G02329 Aquilegia oxysepala HOM05D006993 ORTHO05D008336 1.2e-43 180.6 157 65.0
Nitab4.5_0009028g0040 Nicotiana tabacum HOM05D006993 ORTHO05D008336 2.1e-43 179.9 218 57.8
AT2G04039 Arabidopsis thaliana HOM05D006993 ORTHO05D008336 2.8e-43 179.5 211 49.8
Solyc09g018890.3 Solanum lycopersicum HOM05D006993 ORTHO05D008336 2.8e-43 179.5 185 55.7
Thhalv10002670m.g Eutrema salsugineum HOM05D006993 ORTHO05D008336 3.6e-43 179.1 184 54.3
vmacro02850 Vaccinium macrocarpon HOM05D006993 ORTHO05D008336 4.7e-43 178.7 162 57.4
BcaC06g35821 Brassica carinata HOM05D006993 ORTHO05D008336 8.0e-43 177.9 183 54.1
A07p06910 Brassica napus HOM05D006993 ORTHO05D008336 8.0e-43 177.9 179 55.3
BolC7t41517H Brassica oleracea HOM05D006993 ORTHO05D008336 8.0e-43 177.9 183 54.1
BraA07t28482Z Brassica rapa HOM05D006993 ORTHO05D008336 8.0e-43 177.9 179 55.3
Gorai.N000700 Gossypium raimondii HOM05D006993 ORTHO05D008336 8.0e-43 177.9 162 58.6
Gohir.D07G168900 Gossypium hirsutum HOM05D006993 ORTHO05D008336 1.4e-42 177.2 205 52.7
BcaB06g26751 Brassica carinata HOM05D006993 ORTHO05D008336 1.8e-42 176.8 212 59.4
SalBow2G0576 Salvia bowleyana HOM05D006993 ORTHO05D008336 1.8e-42 176.8 109 75.2
C07p10500 Brassica napus HOM05D006993 ORTHO05D008336 2.3e-42 176.4 195 53.3
CDE03G0427 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 3.0e-42 176.0 206 51.5
CSS0001652 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 4.0e-42 175.6 192 53.1
AUR62028621 Chenopodium quinoa HOM05D006993 ORTHO05D008336 5.2e-42 175.3 201 56.7
Sed0005772 Sechium edule HOM05D006993 ORTHO05D008336 5.2e-42 175.3 213 49.8
ECA247G3631 Erigeron canadensis HOM05D006993 ORTHO05D008336 6.8e-42 174.9 182 52.7
CDE06G2320 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 8.9e-42 174.5 154 58.4
MBI15_g35689_MAGBIO Magnolia biondii HOM05D006993 ORTHO05D008336 8.9e-42 174.5 172 66.3
Sp3g23040 Schrenkiella parvula HOM05D006993 ORTHO05D008336 3.4e-41 172.6 211 57.8
MELO3C012348.2 Cucumis melo HOM05D006993 ORTHO05D008336 7.5e-41 171.4 213 50.2
Duzib133G0497 Durio zibethinus HOM05D006993 ORTHO05D008336 1.3e-40 170.6 109 75.2
CARHR101970 Cardamine hirsuta HOM05D006993 ORTHO05D008336 1.7e-40 170.2 111 73.0
CsaV3_5G035360 Cucumis sativus L. HOM05D006993 ORTHO05D008336 1.7e-40 170.2 174 54.0
Migut.D00756 Erythranthe guttata HOM05D006993 ORTHO05D008336 4.9e-40 168.7 192 49.0
AUR62008046 Chenopodium quinoa HOM05D006993 ORTHO05D008336 8.3e-40 167.9 199 55.8
HanXRQChr08g0230791 Helianthus annuus HOM05D006993 ORTHO05D008336 1.8e-39 166.8 182 48.9
Zm00001eb108910 Zea mays HOM05D006993 ORTHO05D008336 5.4e-39 165.2 171 49.1
arahy.Tifrunner.gnm1.ann1.6DX8AG Arachis hypogaea HOM05D006993 ORTHO05D008336 9.2e-39 164.5 217 50.2
Carub.0003s2586 Capsella rubella HOM05D006993 ORTHO05D008336 2.7e-38 162.9 106 75.5
Zm00001eb327210 Zea mays HOM05D006993 ORTHO05D008336 4.6e-38 162.2 156 60.9
unitig_736.g22974 Utricularia gibba HOM05D006993 ORTHO05D008336 2.5e-36 156.4 108 68.5
Os07g0607800 Oryza sativa ssp. japonica HOM05D006993 ORTHO05D008336 3.3e-36 156.0 106 62.3
SalBow6G6587 Salvia bowleyana HOM05D006993 ORTHO05D008336 1.6e-35 153.7 98 73.5
Ah.11g050660 Amaranthus hybridus HOM05D006993 ORTHO05D008336 1.4e-34 150.6 141 54.6
SalBow2G2967 Salvia bowleyana HOM05D006993 ORTHO05D008336 4.0e-34 149.1 181 52.5
Gohir.A07G162350 Gossypium hirsutum HOM05D006993 ORTHO05D008336 8.9e-34 147.9 171 49.7
TWI36G0749 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 1.3e-32 144.1 111 64.0
Nitab4.5_0005967g0020 Nicotiana tabacum HOM05D006993 ORTHO05D008336 1.1e-28 131.0 211 50.7
ClCG05G021810 Citrullus lanatus HOM05D006993 ORTHO05D008336 4.3e-28 129.0 111 58.6
AagrBONN_evm.TU.Sc2ySwM_344.1609 Anthoceros agrestis HOM05D006993 ORTHO05D008336 2.8e-27 126.3 107 52.3
SMO111G0038 Selaginella moellendorffii HOM05D006993 ORTHO05D008336 3.7e-24 115.9 101 51.5
Mapoly0043s0057 Marchantia polymorpha HOM05D006993 ORTHO05D008336 1.1e-23 114.4 106 50.9
Pp3c2_17900 Physcomitrium patens HOM05D006993 ORTHO05D008336 4.1e-23 112.5 105 50.5
CBR_g51823 Chara braunii HOM05D006993 ORTHO05D008336 7.8e-14 81.6 72 51.4
Ca_23582_v3 Cicer arietinum L. HOM05D000001 ORTHO05D000003 2.9e-08 63.2 39 76.9
Haze_03547 Corylus avellana HOM05D006993 ORTHO05D008336 8.4e-08 61.6 149 50.3
THA.LOC104815380 Tarenaya hassleriana HOM05D006993 ORTHO05D008336 4.6e-06 55.8 152 46.7


User provided reference genes

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