Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.16G021600 Glycine max HOM05D006631 ORTHO05D008359 2.3e-151 538.9 273 100.0
Phvul.010G116700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 4.8e-125 451.4 280 85.7
VMungo0331G0918 Vigna mungo HOM05D006631 ORTHO05D008359 9.7e-110 400.6 275 77.1
Lalb_Chr17g0342841 Lupinus albus HOM05D006631 ORTHO05D008359 1.3e-106 390.2 273 77.7
Psat3g001400 Pisum sativum HOM05D006631 ORTHO05D008359 5.0e-106 388.3 277 74.4
Lalb_Chr19g0133561 Lupinus albus HOM05D006631 ORTHO05D008359 4.2e-105 385.2 279 73.1
Lj1g0014889 Lotus japonicus HOM05D006631 ORTHO05D008359 3.9e-103 378.6 276 72.5
Glyma.03G259400 Glycine max HOM05D006631 ORTHO05D008359 2.8e-101 372.5 276 72.5
Glyma.19G258300 Glycine max HOM05D006631 ORTHO05D008359 1.1e-100 370.5 279 71.0
Ca_09530_v3 Cicer arietinum L. HOM05D006631 ORTHO05D008359 7.0e-100 367.9 276 72.1
Dinv34238 Davidia involucrata HOM05D006631 ORTHO05D008359 9.1e-100 367.5 278 69.8
Thecc.01G337000 Theobroma cacao HOM05D006631 ORTHO05D008359 9.1e-100 367.5 274 70.8
GSVIVG01027398001 Vitis vinifera HOM05D006631 ORTHO05D008359 9.1e-100 367.5 275 69.1
Duzib138G0935 Durio zibethinus HOM05D006631 ORTHO05D008359 1.7e-98 363.2 276 69.6
QL08p046273 Quercus lobata HOM05D006631 ORTHO05D008359 2.2e-98 362.8 276 70.3
arahy.Tifrunner.gnm1.ann1.NC261Q Arachis hypogaea HOM05D006631 ORTHO05D008359 3.8e-98 362.1 275 69.1
Phvul.006G115700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 1.1e-97 360.5 278 68.3
arahy.Tifrunner.gnm1.ann1.588I57 Arachis hypogaea HOM05D006631 ORTHO05D008359 1.9e-97 359.8 275 68.7
Gorai.007G111000 Gossypium raimondii HOM05D006631 ORTHO05D008359 4.2e-97 358.6 277 67.9
Cfa003762 Carpinus fangiana HOM05D006631 ORTHO05D008359 9.4e-97 357.5 277 69.3
MD01G1086200 Malus domestica HOM05D006631 ORTHO05D008359 1.2e-96 357.1 274 70.1
Gohir.D11G103700 Gossypium hirsutum HOM05D006631 ORTHO05D008359 1.6e-96 356.7 277 67.5
FvH4_7g17240 Fragaria vesca HOM05D006631 ORTHO05D008359 2.1e-96 356.3 279 66.7
Gohir.A11G099200 Gossypium hirsutum HOM05D006631 ORTHO05D008359 2.7e-96 355.9 277 67.5
TWI59G0463 Tripterygium wilfordii HOM05D006631 ORTHO05D008359 2.7e-96 355.9 273 67.0
CsaV3_3G007830 Cucumis sativus L. HOM05D006631 ORTHO05D008359 4.7e-96 355.1 276 69.2
Manes.05G019200 Manihot esculenta HOM05D006631 ORTHO05D008359 6.1e-96 354.8 271 69.7
TPR.G4790 Trifolium pratense HOM05D006631 ORTHO05D008359 8.0e-96 354.4 282 68.4
Potri.014G102400 Populus trichocarpa HOM05D006631 ORTHO05D008359 1.0e-95 354.0 279 67.7
Eucgr.D02642 Eucalyptus grandis HOM05D006631 ORTHO05D008359 1.4e-95 353.6 281 65.1
FAN06G3756 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.3e-95 352.8 280 66.1
Prupe.2G193800 Prunus persica HOM05D006631 ORTHO05D008359 2.3e-95 352.8 274 68.2
Ciclev10021628m.g Citrus clementina HOM05D006631 ORTHO05D008359 4.0e-95 352.1 279 67.4
CANSAT56G2365 Cannabis sativa HOM05D006631 ORTHO05D008359 6.7e-95 351.3 277 65.3
FAN06G3280 Fragaria x ananassa HOM05D006631 ORTHO05D008359 6.7e-95 351.3 282 66.0
CiPaw.01G079400 Carya illinoinensis HOM05D006631 ORTHO05D008359 2.0e-94 349.7 276 67.0
RcHm_v2.0_Chr1g0360621 Rosa chinensis HOM05D006631 ORTHO05D008359 3.3e-94 349.0 280 65.4
Cpa.g.sc144.12 Carica papaya HOM05D006631 ORTHO05D008359 4.4e-94 348.6 273 66.7
TAR375G0108 Trochodendron aralioides HOM05D006631 ORTHO05D008359 7.5e-94 347.8 277 66.1
Medtr7g117970 Medicago truncatula HOM05D006631 ORTHO05D008359 9.7e-94 347.4 276 68.5
PSO063G1328 Papaver somniferum HOM05D006631 ORTHO05D008359 2.2e-93 346.3 285 66.3
PSO782G2421 Papaver somniferum HOM05D006631 ORTHO05D008359 4.8e-93 345.1 283 67.1
PGSC0003DMG400000125 Solanum tuberosum HOM05D006631 ORTHO05D008359 4.8e-93 345.1 278 66.9
AUR62022720 Chenopodium quinoa HOM05D006631 ORTHO05D008359 1.1e-92 344.0 277 65.3
Atru.chr5.731 Acer truncatum HOM05D006631 ORTHO05D008359 1.4e-92 343.6 276 65.6
CSS0022670 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 1.4e-92 343.6 279 65.6
ClCG05G000610 Citrullus lanatus HOM05D006631 ORTHO05D008359 1.4e-92 343.6 275 66.2
Hund16731 Selenicereus undatus HOM05D006631 ORTHO05D008359 1.4e-92 343.6 274 67.2
Sopen01g040000 Solanum pennellii HOM05D006631 ORTHO05D008359 2.4e-92 342.8 278 66.2
COL.COLO4_06257 Corchorus olitorius HOM05D006631 ORTHO05D008359 5.3e-92 341.7 259 70.7
Solyc01g096240.4 Solanum lycopersicum HOM05D006631 ORTHO05D008359 5.3e-92 341.7 278 66.2
Nitab4.5_0002527g0020 Nicotiana tabacum HOM05D006631 ORTHO05D008359 2.7e-91 339.3 280 63.6
Actinidia28101 Actinidia chinensis HOM05D006631 ORTHO05D008359 3.5e-91 339.0 276 65.9
AUR62004534 Chenopodium quinoa HOM05D006631 ORTHO05D008359 7.7e-91 337.8 284 64.1
Nn1g00373 Nelumbo nucifera HOM05D006631 ORTHO05D008359 1.0e-90 337.4 283 64.7
MELO3C005999.2 Cucumis melo HOM05D006631 ORTHO05D008359 2.2e-90 336.3 305 62.0
THA.LOC104817387 Tarenaya hassleriana HOM05D006631 ORTHO05D008359 2.2e-90 336.3 277 64.6
MSTRG.4800 Avicennia marina HOM05D006631 ORTHO05D008359 5.0e-90 335.1 278 64.0
PGR031G0416 Punica granatum HOM05D006631 ORTHO05D008359 5.0e-90 335.1 278 65.1
AL5G44450 Arabidopsis lyrata HOM05D006631 ORTHO05D008359 6.5e-90 334.7 271 64.9
Carub.0005s2861 Capsella rubella HOM05D006631 ORTHO05D008359 2.5e-89 332.8 271 64.2
Lj9A602T26 Lonicera japonica HOM05D006631 ORTHO05D008359 5.5e-89 331.6 302 59.9
SalBow5G1997 Salvia bowleyana HOM05D006631 ORTHO05D008359 1.2e-88 330.5 281 64.4
Rhsim01G0176500 Rhododendron simsii HOM05D006631 ORTHO05D008359 2.7e-88 329.3 230 72.6
ECA240G4795 Erigeron canadensis HOM05D006631 ORTHO05D008359 3.6e-88 328.9 224 74.1
Nitab4.5_0000307g0140 Nicotiana tabacum HOM05D006631 ORTHO05D008359 3.6e-88 328.9 269 63.9
Haze_15698 Corylus avellana HOM05D006631 ORTHO05D008359 6.1e-88 328.2 199 80.4
MSTRG.28278 Avicennia marina HOM05D006631 ORTHO05D008359 1.8e-87 326.6 280 64.6
Thhalv10006166m.g Eutrema salsugineum HOM05D006631 ORTHO05D008359 1.8e-87 326.6 268 64.2
CAN.G1415.2 Capsicum annuum HOM05D006631 ORTHO05D008359 2.3e-87 326.2 200 80.0
C08p36710 Brassica napus HOM05D006631 ORTHO05D008359 4.0e-87 325.5 270 63.3
BolC8t51253H Brassica oleracea HOM05D006631 ORTHO05D008359 4.0e-87 325.5 270 63.3
AT3G61870 Arabidopsis thaliana HOM05D006631 ORTHO05D008359 6.8e-87 324.7 278 62.6
A09p53900 Brassica napus HOM05D006631 ORTHO05D008359 4.4e-86 322.0 225 71.1
BraA09t40806Z Brassica rapa HOM05D006631 ORTHO05D008359 4.4e-86 322.0 225 71.1
Sp5g01490 Schrenkiella parvula HOM05D006631 ORTHO05D008359 4.4e-86 322.0 268 61.9
HPP92_002500 Vanilla planifolia HOM05D006631 ORTHO05D008359 5.7e-86 321.6 272 65.1
Lsat_1_v5_gn_3_141021 Lactuca sativa HOM05D006631 ORTHO05D008359 7.5e-86 321.2 274 62.4
Aa31LG10G15890 Aethionema arabicum HOM05D006631 ORTHO05D008359 9.8e-86 320.9 284 62.0
Sabra14G0075400 Salix brachista HOM05D006631 ORTHO05D008359 9.8e-86 320.9 199 77.4
FAN03G0022 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.2e-85 319.7 258 62.8
MBI04_g33414_MAGBIO Magnolia biondii HOM05D006631 ORTHO05D008359 2.8e-85 319.3 305 59.7
VMungo0540G1103 Vigna mungo HOM05D006631 ORTHO05D008359 2.8e-85 319.3 202 77.7
Sc23g0001960 Simmondsia chinensis HOM05D006631 ORTHO05D008359 3.7e-85 318.9 201 76.6
CARHR172210 Cardamine hirsuta HOM05D006631 ORTHO05D008359 6.3e-85 318.2 272 61.8
FAN10G3243 Fragaria x ananassa HOM05D006631 ORTHO05D008359 8.3e-85 317.8 223 70.0
FAN01G0947 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.1e-84 317.4 230 69.1
SEGI_25065 Sequoiadendron giganteum HOM05D006631 ORTHO05D008359 9.1e-84 314.3 216 71.8
Migut.N01525 Erythranthe guttata HOM05D006631 ORTHO05D008359 1.6e-83 313.5 253 63.6
Peaxi162Scf00767g00111 Petunia axillaris HOM05D006631 ORTHO05D008359 2.0e-83 313.2 200 75.0
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 2.0e-83 313.2 214 74.8
Ah.05g179220 Amaranthus hybridus HOM05D006631 ORTHO05D008359 8.6e-82 307.8 280 59.3
arahy.Tifrunner.gnm1.ann1.S1C8P4 Arachis hypogaea HOM05D006631 ORTHO05D008359 1.5e-81 307.0 286 65.0
Sed0011774 Sechium edule HOM05D006631 ORTHO05D008359 1.9e-81 306.6 274 62.4
CDE07G1250 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 5.5e-81 305.1 209 72.2
HanXRQChr03g0094051 Helianthus annuus HOM05D006631 ORTHO05D008359 1.6e-80 303.5 288 59.0
SMO143G0155 Selaginella moellendorffii HOM05D006631 ORTHO05D008359 6.1e-80 301.6 196 74.5
ATR0620G070 Amborella trichopoda HOM05D006631 ORTHO05D008359 3.0e-79 299.3 242 64.5
Os02g0122500 Oryza sativa ssp. japonica HOM05D006631 ORTHO05D008359 1.2e-75 287.3 213 67.1
arahy.Tifrunner.gnm1.ann1.GG2XE6 Arachis hypogaea HOM05D006631 ORTHO05D008359 1.6e-75 287.0 241 68.0
Mapoly0049s0137 Marchantia polymorpha HOM05D006631 ORTHO05D008359 7.8e-75 284.6 222 67.6
Oeu007870.1 Olea europaea HOM05D006631 ORTHO05D008359 8.0e-72 274.6 178 75.3
Pp3c5_3210 Physcomitrium patens HOM05D006631 ORTHO05D008359 6.8e-71 271.6 218 65.1
BcaC07g42601 Brassica carinata HOM05D006631 ORTHO05D008359 7.5e-70 268.1 267 56.9
CBR_g37545 Chara braunii HOM05D006631 ORTHO05D008359 3.0e-66 256.1 197 62.9
EL10Ac1g00220 Beta vulgaris HOM05D006631 ORTHO05D008359 2.1e-64 250.0 221 60.2
DCAR_008654 Daucus carota HOM05D006631 ORTHO05D008359 3.6e-64 249.2 176 71.6
MD07G1155100 Malus domestica HOM05D006631 ORTHO05D008359 1.4e-63 247.3 155 80.0
FAN10G2512 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.8e-63 246.9 280 51.4
CDE09G1080 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 3.2e-60 236.1 217 55.3
SGA_v2.0_scaffold581G53044 Striga asiatica HOM05D006631 ORTHO05D008359 3.5e-59 232.6 156 72.4
MCO07G366 Micromonas commoda HOM05D006631 ORTHO05D008359 4.3e-57 225.7 209 56.5
Cc02_g39740 Coffea canephora HOM05D006631 ORTHO05D008359 2.8e-56 223.0 201 56.7
Cre12.g519300 Chlamydomonas reinhardtii HOM05D006631 ORTHO05D008359 6.2e-56 221.9 228 51.8
PRCOL_00004956 Prasinoderma coloniale HOM05D006631 ORTHO05D008359 1.9e-52 210.3 210 52.4
CSS0025910 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 6.8e-47 191.8 116 78.4
AagrBONN_evm.TU.Sc2ySwM_362.2495 Anthoceros agrestis HOM05D006631 ORTHO05D008359 5.6e-41 172.2 111 73.0
unitig_8.g3405 Utricularia gibba HOM05D006631 ORTHO05D008359 9.6e-41 171.4 173 57.2
TAR374G1086 Trochodendron aralioides HOM05D000482 ORTHO05D000349 2.7e-35 153.3 192 49.0
TAR374G0170 Trochodendron aralioides HOM05D000482 ORTHO05D000349 7.4e-25 118.6 74 78.4
TAR374G1450 Trochodendron aralioides HOM05D000482 ORTHO05D000349 7.1e-20 102.1 116 50.0
unitig_22.g6820 Utricularia gibba HOM05D006631 ORTHO05D008359 2.4e-07 60.5 60 58.3


User provided reference genes

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