Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.16G011300 Glycine max HOM05D001276 ORTHO05D001085 1.4e-31 139.0 71 100.0
Glyma.07G042900 Glycine max HOM05D001276 ORTHO05D001085 2.3e-26 121.7 69 91.3
Phvul.010G126500 Phaseolus vulgaris HOM05D001276 ORTHO05D001085 8.6e-18 93.2 69 68.1
VMungo0331G0272 Vigna mungo HOM05D001276 ORTHO05D001085 1.4e-15 85.9 69 63.8
Cc07_g12250 Coffea canephora HOM05D001276 ORTHO05D001085 2.1e-11 72.0 65 56.9
Dinv20399 Davidia involucrata HOM05D001276 ORTHO05D001085 4.6e-11 70.9 70 57.1
Solyc02g038720.2 Solanum lycopersicum HOM05D001276 ORTHO05D001085 4.6e-11 70.9 67 59.7
FAN03G2420 Fragaria x ananassa HOM05D001276 ORTHO05D001085 6.0e-11 70.5 65 52.3
RcHm_v2.0_Chr2g0146771 Rosa chinensis HOM05D001276 ORTHO05D001085 6.0e-11 70.5 65 52.3
Prupe.3G035800 Prunus persica HOM05D001276 ORTHO05D001085 7.8e-11 70.1 65 55.4
Lj9A536T70 Lonicera japonica HOM05D001276 ORTHO05D001085 1.0e-10 69.7 67 55.2
Duzib168G1696 Durio zibethinus HOM05D001276 ORTHO05D001085 1.3e-10 69.3 69 52.2
Lj9A536T71 Lonicera japonica HOM05D001276 ORTHO05D001085 1.3e-10 69.3 67 55.2
Thecc.09G066600 Theobroma cacao HOM05D001276 ORTHO05D001085 1.3e-10 69.3 69 52.2
Aqoxy7G00989 Aquilegia oxysepala HOM05D001276 ORTHO05D001085 1.7e-10 68.9 67 53.7
Duzib187G1045 Durio zibethinus HOM05D001276 ORTHO05D001085 1.7e-10 68.9 69 52.2
FvH4_7g04450 Fragaria vesca HOM05D001276 ORTHO05D001085 2.3e-10 68.6 65 50.8
FAN01G3041 Fragaria x ananassa HOM05D001276 ORTHO05D001085 2.3e-10 68.6 65 50.8
FAN06G3313 Fragaria x ananassa HOM05D001276 ORTHO05D001085 2.3e-10 68.6 65 50.8
FAN06G4055 Fragaria x ananassa HOM05D001276 ORTHO05D001085 2.3e-10 68.6 65 50.8
FAN10G0664 Fragaria x ananassa HOM05D001276 ORTHO05D001085 2.3e-10 68.6 65 50.8
Actinidia26008 Actinidia chinensis HOM05D001276 ORTHO05D001085 3.0e-10 68.2 65 53.8
Nitab4.5_0000235g0190 Nicotiana tabacum HOM05D001276 ORTHO05D001085 3.9e-10 67.8 65 56.9
PGSC0003DMG400034344 Solanum tuberosum HOM05D001276 ORTHO05D001085 3.9e-10 67.8 59 59.3
MD17G1150100 Malus domestica HOM05D001276 ORTHO05D001085 6.6e-10 67.0 65 55.4
COL.COLO4_21170 Corchorus olitorius HOM05D001276 ORTHO05D001085 8.6e-10 66.6 69 50.7
Dinv37841 Davidia involucrata HOM05D001276 ORTHO05D001085 8.6e-10 66.6 65 55.4
Peaxi162Scf00431g00312 Petunia axillaris HOM05D001276 ORTHO05D001085 1.5e-09 65.9 65 53.8
Manes.16G087900 Manihot esculenta HOM05D001276 ORTHO05D001085 1.9e-09 65.5 69 53.6
Gohir.A06G081200 Gossypium hirsutum HOM05D001276 ORTHO05D001085 4.3e-09 64.3 65 52.3
Gorai.010G094200 Gossypium raimondii HOM05D001276 ORTHO05D001085 4.3e-09 64.3 65 50.8
MD09G1176700 Malus domestica HOM05D001276 ORTHO05D001085 4.3e-09 64.3 65 53.8
Gohir.D06G080800 Gossypium hirsutum HOM05D001276 ORTHO05D001085 5.6e-09 63.9 65 50.8
Manes.03G055600 Manihot esculenta HOM05D001276 ORTHO05D001085 9.5e-09 63.2 69 52.2
CiPaw.02G133300 Carya illinoinensis HOM05D001276 ORTHO05D001085 2.1e-08 62.0 69 47.8
Lsat_1_v5_gn_4_91621 Lactuca sativa HOM05D001276 ORTHO05D001085 4.7e-08 60.8 59 61.0
PGR102G0576 Punica granatum HOM05D001276 ORTHO05D001085 8.1e-08 60.1 67 47.8
ECA232G3969 Erigeron canadensis HOM05D001276 ORTHO05D001085 1.4e-07 59.3 59 57.6
SalBow3G2070 Salvia bowleyana HOM05D001276 ORTHO05D001085 5.2e-07 57.4 39 66.7
CANSAT56G1768 Cannabis sativa HOM05D001276 ORTHO05D001085 6.8e-07 57.0 67 53.7
Potri.006G217800 Populus trichocarpa HOM05D001276 ORTHO05D001085 6.8e-07 57.0 69 46.4
Eucgr.J02611 Eucalyptus grandis HOM05D001276 ORTHO05D001085 8.9e-07 56.6 68 48.5
ATR0681G319 Amborella trichopoda HOM05D001276 ORTHO05D001085 1.2e-06 56.2 41 70.7
Ciclev10010174m.g Citrus clementina HOM05D001276 ORTHO05D001085 1.2e-06 56.2 66 51.5
Atru.chr7.1813 Acer truncatum HOM05D001276 ORTHO05D001085 1.5e-06 55.8 61 52.5
DCAR_026428 Daucus carota HOM05D001276 ORTHO05D001085 1.5e-06 55.8 70 47.1
ClCG09G001210 Citrullus lanatus HOM05D001276 ORTHO05D001085 2.0e-06 55.5 67 43.3
Sed0023283 Sechium edule HOM05D001276 ORTHO05D001085 2.0e-06 55.5 69 44.9
Potri.018G047201 Populus trichocarpa HOM05D001276 ORTHO05D001085 3.4e-06 54.7 68 48.5
GSVIVG01016702001 Vitis vinifera HOM05D001276 ORTHO05D001085 5.8e-06 53.9 66 47.0
CsaV3_7G034160 Cucumis sativus L. HOM05D001276 ORTHO05D001085 9.9e-06 53.1 59 44.1


User provided reference genes

Program Settings