Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.15G268700 Glycine max HOM05D007302 ORTHO05D009191 3.6e-62 241.5 131 100.0
Phvul.005G041100 Phaseolus vulgaris HOM05D007302 ORTHO05D009191 1.6e-54 216.1 128 89.8
VMungo1080G0568 Vigna mungo HOM05D007302 ORTHO05D009191 2.1e-54 215.7 131 88.5
Ca_02882_v3 Cicer arietinum L. HOM05D007302 ORTHO05D009191 2.4e-50 202.2 131 82.4
Medtr2g061420 Medicago truncatula HOM05D007302 ORTHO05D009191 1.6e-49 199.5 131 82.4
Lj6g0025867 Lotus japonicus HOM05D007302 ORTHO05D009191 6.0e-49 197.6 131 80.2
TPR.G16161 Trifolium pratense HOM05D007302 ORTHO05D009191 7.8e-49 197.2 132 82.6
Lj3g0023486 Lotus japonicus HOM05D007302 ORTHO05D009191 1.7e-48 196.1 131 79.4
Psat1g127480 Pisum sativum HOM05D007302 ORTHO05D009191 1.7e-48 196.1 131 80.9
Lalb_Chr25g0283591 Lupinus albus HOM05D007302 ORTHO05D009191 7.3e-47 190.7 131 79.4
Manes.10G151800 Manihot esculenta HOM05D007302 ORTHO05D009191 3.6e-46 188.3 132 79.5
QL04p001433 Quercus lobata HOM05D007302 ORTHO05D009191 6.2e-46 187.6 119 83.2
Haze_03286 Corylus avellana HOM05D007302 ORTHO05D009191 1.4e-45 186.4 131 77.9
CANSAT11G0176 Cannabis sativa HOM05D007302 ORTHO05D009191 2.4e-45 185.7 116 83.6
CsaV3_7G031460 Cucumis sativus L. HOM05D007302 ORTHO05D009191 2.4e-45 185.7 121 79.3
arahy.Tifrunner.gnm1.ann1.5U19IL Arachis hypogaea HOM05D007302 ORTHO05D009191 3.1e-45 185.3 132 77.3
Cfa010688 Carpinus fangiana HOM05D007302 ORTHO05D009191 6.8e-45 184.1 131 77.1
RcHm_v2.0_Chr1g0313291 Rosa chinensis HOM05D007302 ORTHO05D009191 6.8e-45 184.1 120 80.8
MD07G1001600 Malus domestica HOM05D007302 ORTHO05D009191 8.9e-45 183.7 131 74.8
TWI09G1618 Tripterygium wilfordii HOM05D007302 ORTHO05D009191 8.9e-45 183.7 130 77.7
FAN03G0504 Fragaria x ananassa HOM05D007302 ORTHO05D009191 1.5e-44 183.0 119 80.7
Prupe.2G003100 Prunus persica HOM05D007302 ORTHO05D009191 2.6e-44 182.2 121 78.5
Sed0011752 Sechium edule HOM05D007302 ORTHO05D009191 2.6e-44 182.2 121 76.9
TAR369G0850 Trochodendron aralioides HOM05D007302 ORTHO05D009191 2.6e-44 182.2 129 75.2
Thhalv10001676m.g Eutrema salsugineum HOM05D007302 ORTHO05D009191 3.4e-44 181.8 116 83.6
TAR369G0332 Trochodendron aralioides HOM05D007302 ORTHO05D009191 3.4e-44 181.8 124 77.4
GSVIVG01001360001 Vitis vinifera HOM05D007302 ORTHO05D009191 9.9e-44 180.3 122 79.5
arahy.Tifrunner.gnm1.ann1.Z7X15P Arachis hypogaea HOM05D007302 ORTHO05D009191 1.3e-43 179.9 119 79.0
Ciclev10033063m.g Citrus clementina HOM05D007302 ORTHO05D009191 1.3e-43 179.9 123 77.2
Sp4g26420 Schrenkiella parvula HOM05D007302 ORTHO05D009191 1.3e-43 179.9 116 82.8
AT2G44360 Arabidopsis thaliana HOM05D007302 ORTHO05D009191 1.7e-43 179.5 116 82.8
Cpa.g.sc189.6 Carica papaya HOM05D007302 ORTHO05D009191 1.7e-43 179.5 131 72.5
Potri.001G230100 Populus trichocarpa HOM05D007302 ORTHO05D009191 2.9e-43 178.7 131 74.0
MBI08_g23101_MAGBIO Magnolia biondii HOM05D007302 ORTHO05D009191 3.8e-43 178.3 123 77.2
Carub.0004s2694 Capsella rubella HOM05D007302 ORTHO05D009191 4.9e-43 177.9 119 79.8
FvH4_7g00100 Fragaria vesca HOM05D007302 ORTHO05D009191 8.4e-43 177.2 109 86.2
Nn2g15684 Nelumbo nucifera HOM05D007302 ORTHO05D009191 1.1e-42 176.8 119 79.0
Aa31LG1G25940 Aethionema arabicum HOM05D007302 ORTHO05D009191 3.2e-42 175.3 116 80.2
CARHR139520 Cardamine hirsuta HOM05D007302 ORTHO05D009191 4.2e-42 174.9 119 79.0
A04p33280 Brassica napus HOM05D007302 ORTHO05D009191 7.1e-42 174.1 126 76.2
BraA04t18789Z Brassica rapa HOM05D007302 ORTHO05D009191 7.1e-42 174.1 126 76.2
ClCG09G003750 Citrullus lanatus HOM05D007302 ORTHO05D009191 7.1e-42 174.1 121 76.9
QL04p001298 Quercus lobata HOM05D007302 ORTHO05D009191 7.1e-42 174.1 143 69.2
THA.LOC104817151 Tarenaya hassleriana HOM05D007302 ORTHO05D009191 7.1e-42 174.1 120 76.7
Thecc.01G416400 Theobroma cacao HOM05D007302 ORTHO05D009191 9.3e-42 173.7 123 78.9
BcaB06g29370 Brassica carinata HOM05D007302 ORTHO05D009191 1.6e-41 172.9 116 80.2
C04p70980 Brassica napus HOM05D007302 ORTHO05D009191 1.6e-41 172.9 116 80.2
BolC4t28601H Brassica oleracea HOM05D007302 ORTHO05D009191 1.6e-41 172.9 116 80.2
Atru.chr11.2701 Acer truncatum HOM05D007302 ORTHO05D009191 2.1e-41 172.6 129 73.6
vmacro13612 Vaccinium macrocarpon HOM05D007302 ORTHO05D009191 2.7e-41 172.2 130 72.3
AL4G43340 Arabidopsis lyrata HOM05D007302 ORTHO05D009191 4.6e-41 171.4 116 79.3
Migut.N01659 Erythranthe guttata HOM05D007302 ORTHO05D009191 6.0e-41 171.0 129 70.5
Migut.O00474 Erythranthe guttata HOM05D007302 ORTHO05D009191 6.0e-41 171.0 129 70.5
Actinidia05847 Actinidia chinensis HOM05D007302 ORTHO05D009191 7.8e-41 170.6 122 77.0
Lsat_1_v5_gn_1_87261 Lactuca sativa HOM05D007302 ORTHO05D009191 7.8e-41 170.6 124 76.6
MELO3C023508.2 Cucumis melo HOM05D007302 ORTHO05D009191 1.0e-40 170.2 147 65.3
Eucgr.G03411 Eucalyptus grandis HOM05D007302 ORTHO05D009191 1.7e-40 169.5 117 75.2
DCAR_015712 Daucus carota HOM05D007302 ORTHO05D009191 3.9e-40 168.3 123 75.6
Duzib268G0295 Durio zibethinus HOM05D007302 ORTHO05D009191 3.9e-40 168.3 131 73.3
SalBow4G1665 Salvia bowleyana HOM05D007302 ORTHO05D009191 3.9e-40 168.3 126 73.0
SalBow4G2255 Salvia bowleyana HOM05D007302 ORTHO05D009191 3.9e-40 168.3 126 73.0
MSTRG.28098 Avicennia marina HOM05D007302 ORTHO05D009191 6.6e-40 167.5 114 77.2
Gohir.D08G037201 Gossypium hirsutum HOM05D007302 ORTHO05D009191 1.5e-39 166.4 131 72.5
Gorai.004G035200 Gossypium raimondii HOM05D007302 ORTHO05D009191 1.5e-39 166.4 131 72.5
Actinidia31711 Actinidia chinensis HOM05D007302 ORTHO05D009191 9.6e-39 163.7 109 78.9
Rhsim07G0050000 Rhododendron simsii HOM05D007302 ORTHO05D009191 1.3e-38 163.3 130 70.0
PSO384G4593 Papaver somniferum HOM05D007302 ORTHO05D009191 2.1e-38 162.5 124 70.2
Gohir.A08G026680 Gossypium hirsutum HOM05D007302 ORTHO05D009191 3.6e-38 161.8 116 76.7
ECA248G3756 Erigeron canadensis HOM05D007302 ORTHO05D009191 4.8e-38 161.4 122 73.8
PSO339G0269 Papaver somniferum HOM05D007302 ORTHO05D009191 4.8e-38 161.4 124 70.2
CiPaw.16G067000 Carya illinoinensis HOM05D007302 ORTHO05D009191 6.2e-38 161.0 121 71.9
FAN06G3306 Fragaria x ananassa HOM05D007302 ORTHO05D009191 1.4e-37 159.8 106 80.2
Aqoxy1G00038 Aquilegia oxysepala HOM05D003342 ORTHO05D003861 2.4e-37 159.1 122 70.5
Nn7g36009 Nelumbo nucifera HOM05D007302 ORTHO05D009191 5.3e-37 157.9 125 68.8
FAN10G3108 Fragaria x ananassa HOM05D007302 ORTHO05D009191 6.9e-37 157.5 106 79.2
Sabra16G0137900 Salix brachista HOM05D007302 ORTHO05D009191 1.2e-36 156.8 167 56.3
Sopen10g014540 Solanum pennellii HOM05D007302 ORTHO05D009191 4.4e-36 154.8 110 74.5
Sc11g0006270 Simmondsia chinensis HOM05D007302 ORTHO05D009191 7.6e-36 154.1 129 64.3
PGSC0003DMG400028766 Solanum tuberosum HOM05D007302 ORTHO05D009191 3.8e-35 151.8 110 73.6
unitig_736.g22290 Utricularia gibba HOM05D007302 ORTHO05D009191 3.8e-35 151.8 110 71.8
CSS0001542 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 4.9e-35 151.4 98 81.6
CSS0004707 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 4.9e-35 151.4 98 81.6
HanXRQChr15g0480631 Helianthus annuus HOM05D007302 ORTHO05D009191 4.9e-35 151.4 115 72.2
Solyc10g045350.2 Solanum lycopersicum HOM05D007302 ORTHO05D009191 1.1e-34 150.2 110 73.6
Cc02_g26960 Coffea canephora HOM05D007302 ORTHO05D009191 1.4e-34 149.8 124 69.4
Actinidia25680 Actinidia chinensis HOM05D007302 ORTHO05D009191 5.4e-34 147.9 102 75.5
Peaxi162Scf00245g01315 Petunia axillaris HOM05D007302 ORTHO05D009191 5.4e-34 147.9 110 72.7
CDE07G1496 Ceratophyllum demersum HOM05D007302 ORTHO05D009191 3.5e-33 145.2 123 60.2
SGA_v2.0_scaffold95G28773 Striga asiatica HOM05D007302 ORTHO05D009191 2.3e-32 142.5 130 63.8
ATR0807G228 Amborella trichopoda HOM05D007302 ORTHO05D009191 2.1e-30 136.0 104 68.3
Hund06578 Selenicereus undatus HOM05D007302 ORTHO05D009191 2.8e-30 135.6 127 59.8
Dinv43937 Davidia involucrata HOM05D007302 ORTHO05D009191 1.5e-28 129.8 122 63.9
COL.COLO4_25061 Corchorus olitorius HOM05D007302 ORTHO05D009191 2.0e-28 129.4 117 67.5
EL10Ac9g21938 Beta vulgaris HOM05D007302 ORTHO05D009191 9.9e-28 127.1 109 65.1
CSS0017005 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 2.4e-26 122.5 114 62.3
SEGI_27997 Sequoiadendron giganteum HOM05D007302 ORTHO05D009191 2.7e-25 119.0 106 60.4
AUR62011558 Chenopodium quinoa HOM05D007302 ORTHO05D009191 3.9e-24 115.2 117 59.0
HPP92_022445 Vanilla planifolia HOM05D007302 ORTHO05D009191 5.1e-24 114.8 88 69.3
AUR62016377 Chenopodium quinoa HOM05D007302 ORTHO05D009191 6.7e-24 114.4 110 60.0
CSS0014571 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 1.6e-22 109.8 111 59.5
Oeu003126.2 Olea europaea HOM05D007302 ORTHO05D009191 6.5e-19 97.8 74 68.9
Pp3c17_19080 Physcomitrium patens HOM05D007302 ORTHO05D009191 7.1e-18 94.4 118 45.8
Os09g0553800 Oryza sativa ssp. japonica HOM05D007302 ORTHO05D009191 9.3e-18 94.0 73 68.5
DCAR_024994 Daucus carota HOM05D007302 ORTHO05D009191 7.9e-17 90.9 95 57.9
CBR_g22319 Chara braunii HOM05D000019 ORTHO05D000048 1.6e-14 83.2 102 41.2
Mapoly0007s0266 Marchantia polymorpha HOM05D007302 ORTHO05D009191 3.7e-14 82.0 109 43.1
MD05G1005700 Malus domestica HOM05D007302 ORTHO05D009191 2.6e-12 75.9 51 76.5
MD15G1336100 Malus domestica HOM05D007302 ORTHO05D009191 3.3e-07 58.9 55 58.2
BcaB01g03316 Brassica carinata HOM05D007302 ORTHO05D009191 9.7e-07 57.4 52 59.6


User provided reference genes

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