Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.15G260800 Glycine max HOM05D007250 ORTHO05D009162 3.9e-162 574.7 286 100.0
Phvul.005G050100 Phaseolus vulgaris HOM05D007250 ORTHO05D009162 1.7e-128 463.0 286 83.9
Lj3g0020784 Lotus japonicus HOM05D007250 ORTHO05D009162 8.9e-122 440.7 287 79.8
Ca_03591_v3 Cicer arietinum L. HOM05D007250 ORTHO05D009162 5.6e-116 421.4 295 75.3
Medtr1g060720 Medicago truncatula HOM05D007250 ORTHO05D009162 1.6e-110 403.3 287 76.0
Lalb_Chr25g0284601 Lupinus albus HOM05D007250 ORTHO05D009162 3.5e-110 402.1 278 75.5
Psat1g013800 Pisum sativum HOM05D007250 ORTHO05D009162 6.4e-96 354.8 265 72.8
Haze_07815 Corylus avellana HOM05D007250 ORTHO05D009162 1.4e-90 337.0 286 60.5
arahy.Tifrunner.gnm1.ann1.QIZU11 Arachis hypogaea HOM05D007250 ORTHO05D009162 1.2e-89 334.0 341 56.6
QL04p088943 Quercus lobata HOM05D007250 ORTHO05D009162 5.4e-87 325.1 285 59.6
QL04p088484 Quercus lobata HOM05D007250 ORTHO05D009162 7.8e-86 321.2 285 59.3
CiPaw.11G061700 Carya illinoinensis HOM05D007250 ORTHO05D009162 1.0e-85 320.9 287 57.1
Ciclev10005586m.g Citrus clementina HOM05D007250 ORTHO05D009162 1.0e-85 320.9 278 59.4
GSVIVG01036780001 Vitis vinifera HOM05D007250 ORTHO05D009162 1.7e-85 320.1 220 67.3
ClCG02G018630 Citrullus lanatus HOM05D007250 ORTHO05D009162 3.9e-85 318.9 241 63.5
Manes.06G175800 Manihot esculenta HOM05D007250 ORTHO05D009162 1.9e-84 316.6 219 67.1
Gorai.013G142400 Gossypium raimondii HOM05D007250 ORTHO05D009162 3.3e-84 315.8 227 67.0
Nn3g20174 Nelumbo nucifera HOM05D007250 ORTHO05D009162 9.6e-84 314.3 274 56.9
BraA09t41463Z Brassica rapa HOM05D007250 ORTHO05D009162 1.3e-83 313.9 219 66.7
arahy.Tifrunner.gnm1.ann1.3NS56Y Arachis hypogaea HOM05D007250 ORTHO05D009162 2.1e-83 313.2 254 68.1
Duzib213G0161 Durio zibethinus HOM05D007250 ORTHO05D009162 2.1e-83 313.2 260 59.6
A09p60900 Brassica napus HOM05D007250 ORTHO05D009162 6.2e-83 311.6 219 66.2
Sed0012120 Sechium edule HOM05D007250 ORTHO05D009162 1.1e-82 310.8 239 61.9
CSS0017513 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 1.8e-82 310.1 210 70.5
Thecc.07G179900 Theobroma cacao HOM05D007250 ORTHO05D009162 3.1e-82 309.3 269 59.1
C08p44490 Brassica napus HOM05D007250 ORTHO05D009162 4.0e-82 308.9 219 66.7
Gohir.D13G127200 Gossypium hirsutum HOM05D007250 ORTHO05D009162 4.0e-82 308.9 218 67.9
MD05G1040700 Malus domestica HOM05D007250 ORTHO05D009162 4.0e-82 308.9 268 61.2
Carub.0001s1619 Capsella rubella HOM05D007250 ORTHO05D009162 2.0e-81 306.6 222 65.8
Potri.007G069400 Populus trichocarpa HOM05D007250 ORTHO05D009162 2.0e-81 306.6 269 59.1
Sabra07G0056900 Salix brachista HOM05D007250 ORTHO05D009162 1.3e-80 303.9 269 58.0
CANSAT56G4154 Cannabis sativa HOM05D007250 ORTHO05D009162 1.7e-80 303.5 260 58.5
Dinv19589 Davidia involucrata HOM05D007250 ORTHO05D009162 1.7e-80 303.5 195 74.9
CsaV3_6G013550 Cucumis sativus L. HOM05D007250 ORTHO05D009162 2.2e-80 303.1 239 61.1
Thhalv10008448m.g Eutrema salsugineum HOM05D007250 ORTHO05D009162 3.8e-80 302.4 221 64.7
Sopen10g001520 Solanum pennellii HOM05D007250 ORTHO05D009162 3.8e-80 302.4 248 61.3
TWI38G0063 Tripterygium wilfordii HOM05D007250 ORTHO05D009162 6.4e-80 301.6 224 62.9
BolC8t51991H Brassica oleracea HOM05D007250 ORTHO05D009162 8.4e-80 301.2 261 59.8
Hma1.2p1_0151F.1_g067310 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 1.1e-79 300.8 205 70.2
vmacro11701 Vaccinium macrocarpon HOM05D007250 ORTHO05D009162 1.1e-79 300.8 224 66.1
CARHR016920 Cardamine hirsuta HOM05D007250 ORTHO05D009162 5.4e-79 298.5 224 63.8
Nitab4.5_0003777g0030 Nicotiana tabacum HOM05D007250 ORTHO05D009162 5.4e-79 298.5 280 55.0
Solyc10g005540.4 Solanum lycopersicum HOM05D007250 ORTHO05D009162 7.1e-79 298.1 248 60.5
CAN.G492.76 Capsicum annuum HOM05D007250 ORTHO05D009162 1.2e-78 297.4 293 53.9
AL1G28580 Arabidopsis lyrata HOM05D007250 ORTHO05D009162 2.1e-78 296.6 224 63.8
AT1G16445 Arabidopsis thaliana HOM05D007250 ORTHO05D009162 4.6e-78 295.4 221 65.2
Sp1g14600 Schrenkiella parvula HOM05D007250 ORTHO05D009162 4.6e-78 295.4 224 63.4
Actinidia12769 Actinidia chinensis HOM05D007250 ORTHO05D000003 6.0e-78 295.0 238 60.5
MSTRG.16100 Avicennia marina HOM05D007250 ORTHO05D009162 7.9e-78 294.7 215 64.7
HanXRQChr05g0160551 Helianthus annuus HOM05D007250 ORTHO05D009162 7.9e-78 294.7 209 65.6
CSS0024774 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 1.7e-77 293.5 221 65.6
Lj2A15T78 Lonicera japonica HOM05D007250 ORTHO05D009162 1.7e-77 293.5 202 68.8
PGSC0003DMG400011276 Solanum tuberosum HOM05D007250 ORTHO05D009162 1.7e-77 293.5 218 66.5
Peaxi162Scf00114g00116 Petunia axillaris HOM05D007250 ORTHO05D009162 2.3e-77 293.1 210 66.2
Lsat_1_v5_gn_7_75520 Lactuca sativa HOM05D007250 ORTHO05D009162 3.0e-77 292.7 264 56.1
RcHm_v2.0_Chr6g0272151 Rosa chinensis HOM05D007250 ORTHO05D009162 3.0e-77 292.7 228 63.2
Rhsim06G0242100 Rhododendron simsii HOM05D007250 ORTHO05D009162 6.6e-77 291.6 246 59.3
Aa31LG7G990 Aethionema arabicum HOM05D007250 ORTHO05D009162 8.7e-77 291.2 224 62.1
AUR62018167 Chenopodium quinoa HOM05D007250 ORTHO05D009162 8.7e-77 291.2 241 58.1
Nitab4.5_0008957g0010 Nicotiana tabacum HOM05D007250 ORTHO05D009162 3.3e-76 289.3 296 52.4
FvH4_2g12161 Fragaria vesca HOM05D007250 ORTHO05D009162 9.6e-76 287.7 223 63.7
Oeu034977.1 Olea europaea HOM05D007250 ORTHO05D009162 1.3e-75 287.3 250 56.8
Eucgr.F04459 Eucalyptus grandis HOM05D007250 ORTHO05D009162 6.2e-75 285.0 220 63.2
PSO541G5100 Papaver somniferum HOM05D007250 ORTHO05D009162 3.1e-74 282.7 270 52.2
Atru.chr1.107 Acer truncatum HOM05D007250 ORTHO05D009162 4.2e-71 272.3 206 64.6
unitig_748.g7850 Utricularia gibba HOM05D007250 ORTHO05D001497 5.5e-71 271.9 211 59.7
AUR62042431 Chenopodium quinoa HOM05D007250 ORTHO05D009162 9.3e-71 271.2 219 58.4
MBI18_g10574_MAGBIO Magnolia biondii HOM05D007250 ORTHO05D009162 3.5e-70 269.2 182 69.2
Os05g0511700 Oryza sativa ssp. japonica HOM05D007250 ORTHO05D009162 8.7e-69 264.6 205 60.0
Gohir.A13G123300 Gossypium hirsutum HOM05D007250 ORTHO05D009162 1.1e-68 264.2 287 50.2
ATR0165G048 Amborella trichopoda HOM05D007250 ORTHO05D009162 7.4e-68 261.5 253 52.2
CDE01G0022 Ceratophyllum demersum HOM05D007250 ORTHO05D009162 2.8e-67 259.6 203 58.1
Zm00001eb292510 Zea mays HOM05D007250 ORTHO05D009162 1.1e-66 257.7 205 59.0
Prupe.8G055300 Prunus persica HOM05D007250 ORTHO05D009162 2.4e-66 256.5 229 59.0
HPP92_000965 Vanilla planifolia HOM05D007250 ORTHO05D009162 4.0e-66 255.8 211 57.3
Hund20100 Selenicereus undatus HOM05D007250 ORTHO05D009162 2.9e-64 249.6 189 63.0
TAR627G0140 Trochodendron aralioides HOM05D007250 ORTHO05D009162 4.2e-63 245.7 249 54.6
COL.COLO4_32252 Corchorus olitorius HOM05D007250 ORTHO05D009162 1.6e-62 243.8 220 58.2
FAN20G1272 Fragaria x ananassa HOM05D007250 ORTHO05D009162 4.8e-59 232.3 219 57.5
Aqoxy6G01374 Aquilegia oxysepala HOM05D007250 ORTHO05D009162 1.2e-57 227.6 218 52.3
SGA_v2.0_scaffold7G03608 Striga asiatica HOM05D001395 ORTHO05D002039 1.7e-56 223.8 220 52.3
EL10Ac2g03263 Beta vulgaris HOM05D007250 ORTHO05D009162 2.5e-55 219.9 274 45.6
Hma1.2p1_0151F.1_g067320 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 1.2e-54 217.6 141 75.2
Cpa.g.sc34.15 Carica papaya HOM05D007250 ORTHO05D009162 3.6e-54 216.1 188 59.6
Pp3c16_19260 Physcomitrium patens HOM05D007250 ORTHO05D009162 5.1e-53 212.2 207 49.3
Mapoly0102s0005 Marchantia polymorpha HOM05D007250 ORTHO05D009162 6.3e-51 205.3 203 48.3
SMO141G0022 Selaginella moellendorffii HOM05D007250 ORTHO05D009162 6.9e-50 201.8 185 53.0
Cc05_g16330 Coffea canephora HOM05D007250 ORTHO05D009162 4.5e-49 199.1 141 67.4
PGR031G0704 Punica granatum HOM05D007250 ORTHO05D009162 1.3e-48 197.6 211 47.9
AagrBONN_evm.TU.Sc2ySwM_117.37 Anthoceros agrestis HOM05D007250 ORTHO05D009162 5.0e-48 195.7 199 48.7
Hma1.2p1_0616F.1_g189960 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 1.9e-39 167.2 169 56.2
Migut.M01530 Erythranthe guttata HOM05D007250 ORTHO05D009162 2.1e-38 163.7 110 66.4
VMungo1080G0363 Vigna mungo HOM05D007250 ORTHO05D009162 1.0e-32 144.8 286 38.1
MCO03G414 Micromonas commoda HOM05D007250 ORTHO05D009162 2.9e-32 143.3 203 39.9
SEGI_10655 Sequoiadendron giganteum HOM05D007250 ORTHO05D009162 6.1e-30 135.6 105 62.9
QL03p068942 Quercus lobata HOM05D007250 ORTHO05D009162 1.2e-28 131.3 208 41.3
FAN24G3506 Fragaria x ananassa HOM05D007250 ORTHO05D009162 7.5e-28 128.6 100 62.0
CBR_g32272 Chara braunii HOM05D007250 ORTHO05D009162 1.7e-27 127.5 146 45.2
Migut.M01529 Erythranthe guttata HOM05D007250 ORTHO05D009162 5.9e-25 119.0 85 64.7
Cre12.g517550 Chlamydomonas reinhardtii HOM05D007250 ORTHO05D009162 1.0e-24 118.2 166 39.2
CSS0048664 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 1.2e-22 111.3 102 57.8
Sc10g0008800 Simmondsia chinensis HOM05D007250 ORTHO05D009162 5.2e-21 105.9 84 59.5
PRCOL_00005754 Prasinoderma coloniale HOM05D007250 ORTHO05D009162 2.9e-16 90.1 197 31.5
MELO3C019639.2 Cucumis melo HOM05D007250 ORTHO05D009162 1.3e-11 74.7 41 75.6
Mapoly0062s0100 Marchantia polymorpha HOM05D007250 ORTHO05D009162 1.8e-10 70.9 78 46.2
QL04p088027 Quercus lobata HOM05D037085 ORTHO05D009162 1.2e-09 68.2 54 53.7
QL04p088222 Quercus lobata HOM05D007250 ORTHO05D009162 1.2e-06 58.2 71 49.3
QL04p088276 Quercus lobata HOM05D037085 ORTHO05D009162 2.8e-06 57.0 33 72.7


User provided reference genes

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