Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.15G236000 Glycine max HOM05D000880 ORTHO05D009684 3.3e-104 382.1 249 100.0
Glyma.13G197400 Glycine max HOM05D000880 ORTHO05D009684 4.3e-80 302.0 234 90.6
VMungo1127G1257 Vigna mungo HOM05D000880 ORTHO05D009684 1.2e-58 230.7 237 76.8
Phvul.011G207000 Phaseolus vulgaris HOM05D000880 ORTHO05D009684 1.6e-58 230.3 234 77.4
Ca_12883_v3 Cicer arietinum L. HOM05D000880 ORTHO05D009684 1.6e-42 177.2 222 67.1
Lj3g0007027 Lotus japonicus HOM05D000880 ORTHO05D009684 2.1e-42 176.8 212 66.5
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 2.2e-39 166.8 226 68.6
arahy.Tifrunner.gnm1.ann1.CHY0RW Arachis hypogaea HOM05D000880 ORTHO05D009684 3.1e-38 162.9 226 68.1
Lalb_Chr03g0032741 Lupinus albus HOM05D000880 ORTHO05D009684 2.0e-37 160.2 206 69.9
Psat6g031840 Pisum sativum HOM05D000880 ORTHO05D009684 1.8e-33 147.1 207 67.6
Atru.chr7.2671 Acer truncatum HOM05D000880 ORTHO05D009684 3.3e-32 142.9 234 60.3
TPR.G12115 Trifolium pratense HOM05D000880 ORTHO05D009684 2.8e-31 139.8 203 66.0
Cfa013251 Carpinus fangiana HOM05D000880 ORTHO05D008158 1.8e-30 137.1 221 61.1
Potri.018G004400 Populus trichocarpa HOM05D000880 ORTHO05D009684 3.1e-30 136.3 228 58.8
GSVIVG01003996001 Vitis vinifera HOM05D000880 ORTHO05D009684 1.0e-28 131.3 217 60.8
Haze_10332 Corylus avellana HOM05D000880 ORTHO05D009684 2.2e-28 130.2 214 61.2
Dinv15656 Davidia involucrata HOM05D000880 ORTHO05D009684 2.5e-27 126.7 214 59.8
RcHm_v2.0_Chr6g0312241 Rosa chinensis HOM05D000880 ORTHO05D009684 6.1e-26 122.1 236 55.9
Medtr1g010020 Medicago truncatula HOM05D000880 ORTHO05D009684 1.0e-25 121.3 202 63.9
FAN27G3148 Fragaria x ananassa HOM05D000880 ORTHO05D009684 3.0e-25 119.8 234 54.3
FAN20G2124 Fragaria x ananassa HOM05D000880 ORTHO05D009684 3.9e-25 119.4 234 54.3
FAN24G3119 Fragaria x ananassa HOM05D000880 ORTHO05D009684 3.9e-25 119.4 234 54.7
FvH4_2g30660 Fragaria vesca HOM05D000880 ORTHO05D009684 1.1e-24 117.9 234 54.3
CiPaw.07G214800 Carya illinoinensis HOM05D000880 ORTHO05D009684 4.4e-24 115.9 198 61.6
Actinidia06447 Actinidia chinensis HOM05D000880 ORTHO05D009684 1.7e-23 114.0 194 61.3
CSS0007644 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D009684 2.8e-23 113.2 192 60.4
CsaV3_2G031530 Cucumis sativus L. HOM05D000880 ORTHO05D009684 2.8e-23 113.2 233 52.4
Haze_21694 Corylus avellana HOM05D000880 ORTHO05D009684 3.1e-22 109.8 206 59.2
Aa31LG10G9610 Aethionema arabicum HOM05D000880 ORTHO05D009684 1.5e-21 107.5 195 61.5
Hund04480 Selenicereus undatus HOM05D000880 ORTHO05D009684 7.7e-21 105.1 197 60.4
CANSAT78G1387 Cannabis sativa HOM05D000880 ORTHO05D009684 1.3e-20 104.4 205 59.0
Cpa.g.sc10.206 Carica papaya HOM05D000880 ORTHO05D009684 2.9e-20 103.2 201 58.7
Migut.E01433 Erythranthe guttata HOM05D000880 ORTHO05D009684 5.0e-20 102.4 213 56.8
Prupe.1G462500 Prunus persica HOM05D000880 ORTHO05D009684 1.1e-19 101.3 208 55.3
Aqoxy5G01876 Aquilegia oxysepala HOM05D000880 ORTHO05D009684 1.9e-19 100.5 221 55.7
Manes.07G088100 Manihot esculenta HOM05D000880 ORTHO05D009684 2.5e-19 100.1 206 59.2
QL12p024656 Quercus lobata HOM05D000880 ORTHO05D009684 3.2e-19 99.8 201 57.2
Aa31LG10G9680 Aethionema arabicum HOM05D000880 ORTHO05D009684 7.2e-19 98.6 208 56.7
MD08G1133900 Malus domestica HOM05D000880 ORTHO05D009684 2.1e-18 97.1 208 55.3
Rhsim04G0217100 Rhododendron simsii HOM05D000880 ORTHO05D009684 2.1e-18 97.1 197 57.9
Solyc03g120070.4 Solanum lycopersicum HOM05D000880 ORTHO05D009684 3.6e-18 96.3 233 51.1
Sabra18G0001200 Salix brachista HOM05D000880 ORTHO05D009684 6.1e-18 95.5 203 57.1
Sabra18G0010100 Salix brachista HOM05D000880 ORTHO05D009684 6.1e-18 95.5 204 56.4
Nitab4.5_0000502g0180 Nicotiana tabacum HOM05D000880 ORTHO05D009684 1.0e-17 94.7 195 57.4
Thecc.09G004700 Theobroma cacao HOM05D000880 ORTHO05D009684 5.2e-17 92.4 177 59.9
AUR62003593 Chenopodium quinoa HOM05D000880 ORTHO05D009684 6.7e-17 92.0 172 58.7
AUR62017906 Chenopodium quinoa HOM05D000880 ORTHO05D009684 6.7e-17 92.0 172 58.1
Ciclev10007859m.g Citrus clementina HOM05D000880 ORTHO05D009684 3.3e-16 89.7 194 59.8
PGR044G0315 Punica granatum HOM05D000880 ORTHO05D009684 4.4e-16 89.4 184 57.1
MD15G1110300 Malus domestica HOM05D000880 ORTHO05D009684 7.4e-16 88.6 189 58.7
Lj6C69T3 Lonicera japonica HOM05D000880 ORTHO05D009684 1.7e-15 87.4 216 52.8
DCAR_017077 Daucus carota HOM05D000880 ORTHO05D009684 2.8e-15 86.7 184 53.3
PGSC0003DMG400005692 Solanum tuberosum HOM05D000880 ORTHO05D009684 6.3e-15 85.5 212 51.9
SGA_v2.0_scaffold121G33022 Striga asiatica HOM05D000880 ORTHO05D009684 6.3e-15 85.5 209 46.9
vmacro08192 Vaccinium macrocarpon HOM05D000880 ORTHO05D009684 1.4e-14 84.3 173 63.0
Sopen03g038940 Solanum pennellii HOM05D000880 ORTHO05D009684 3.1e-14 83.2 233 48.5
TAR626G1204 Trochodendron aralioides HOM05D000880 ORTHO05D009684 9.1e-14 81.6 213 51.6
Cc08_g06370 Coffea canephora HOM05D000880 ORTHO05D009684 1.6e-13 80.9 201 55.7
SalBow8G2909 Salvia bowleyana HOM05D004918 ORTHO05D005706 3.5e-13 79.7 186 55.4
vmacro08195 Vaccinium macrocarpon HOM05D000880 ORTHO05D009684 3.5e-13 79.7 191 56.0
ClCG08G012780 Citrullus lanatus HOM05D006422 ORTHO05D007992 7.7e-13 78.6 201 52.7
ECA236G3570 Erigeron canadensis HOM05D000705 ORTHO05D002970 1.0e-12 78.2 219 51.6
Lj4A910T18 Lonicera japonica HOM05D000880 ORTHO05D009684 1.3e-12 77.8 190 54.7
Nn8g39798 Nelumbo nucifera HOM05D000880 ORTHO05D009684 2.2e-12 77.0 185 56.8
Peaxi162Scf00288g01016 Petunia axillaris HOM05D000880 ORTHO05D009684 5.0e-12 75.9 193 54.4
HanXRQChr07g0202221 Helianthus annuus HOM05D000880 ORTHO05D009684 6.5e-12 75.5 66 48.5
MELO3C011202.2 Cucumis melo HOM05D000880 ORTHO05D009684 8.5e-12 75.1 201 51.2
ECA232G0576 Erigeron canadensis HOM05D000880 ORTHO05D009684 6.1e-10 68.9 219 49.8
EL10Ac6g15284 Beta vulgaris HOM05D000880 ORTHO05D009684 1.4e-09 67.8 168 58.3
Sed0004667 Sechium edule HOM05D000880 ORTHO05D009684 2.3e-09 67.0 199 52.3
Ah.02g121750 Amaranthus hybridus HOM05D000880 ORTHO05D009684 3.0e-09 66.6 175 56.6
Lsat_1_v5_gn_5_33201 Lactuca sativa HOM05D000880 ORTHO05D009684 4.0e-09 66.2 92 33.7
Nitab4.5_0001956g0020 Nicotiana tabacum HOM05D000880 ORTHO05D009684 8.8e-09 65.1 207 50.2
MSTRG.13951 Avicennia marina HOM05D000880 ORTHO05D009684 3.3e-08 63.2 177 54.8
A06p35600 Brassica napus HOM05D000880 ORTHO05D009684 5.7e-08 62.4 173 56.1
Eucgr.H00073 Eucalyptus grandis HOM05D000880 ORTHO05D009684 9.7e-08 61.6 184 50.5
CARHR188620 Cardamine hirsuta HOM05D000880 ORTHO05D009684 2.2e-07 60.5 164 57.3
BraA06t26485Z Brassica rapa HOM05D000880 ORTHO05D009684 6.3e-07 58.9 173 55.5
Sp2g22620 Schrenkiella parvula HOM05D000880 ORTHO05D009684 1.1e-06 58.2 179 54.2
C07p42940 Brassica napus HOM05D000880 ORTHO05D009684 4.1e-06 56.2 173 54.9
BolC7t44823H Brassica oleracea HOM05D000880 ORTHO05D009684 4.1e-06 56.2 173 54.9
Cpa.g.sc10.208 Carica papaya HOM05D000880 ORTHO05D009684 4.1e-06 56.2 38 63.2
Thhalv10003880m.g Eutrema salsugineum HOM05D000880 ORTHO05D009684 7.0e-06 55.5 166 56.6
PSO017G1147 Papaver somniferum HOM05D000880 ORTHO05D001950 9.1e-06 55.1 58 43.1


User provided reference genes

Program Settings