Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.15G235500 Glycine max HOM05D006291 ORTHO05D007669 1.6e-62 242.7 130 100.0
Glyma.13G197100 Glycine max HOM05D006291 ORTHO05D007669 8.0e-62 240.4 130 99.2
Phvul.011G206700 Phaseolus vulgaris HOM05D006291 ORTHO05D007669 2.4e-58 228.8 130 93.1
VMungo1127G1563 Vigna mungo HOM05D006291 ORTHO05D007669 9.1e-58 226.9 130 92.3
Lj3g0009914 Lotus japonicus HOM05D006291 ORTHO05D007669 3.8e-56 221.5 130 88.5
Lalb_Chr01g0007741 Lupinus albus HOM05D006291 ORTHO05D007669 3.6e-54 214.9 128 88.3
arahy.Tifrunner.gnm1.ann1.8H1PJC Arachis hypogaea HOM05D006291 ORTHO05D007669 4.7e-54 214.5 128 87.5
Ca_23954_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 2.0e-52 209.1 128 85.2
arahy.Tifrunner.gnm1.ann1.SCY2K5 Arachis hypogaea HOM05D006291 ORTHO05D007669 3.4e-52 208.4 128 85.9
TPR.G27823 Trifolium pratense HOM05D006291 ORTHO05D007669 5.7e-52 207.6 128 84.4
Psat0s418g0040 Pisum sativum HOM05D006291 ORTHO05D007669 3.7e-51 204.9 128 83.6
CAN.G54.10 Capsicum annuum HOM05D006291 ORTHO05D007669 1.2e-49 199.9 130 79.2
Ca_23960_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 1.6e-49 199.5 120 86.7
PGSC0003DMG400013569 Solanum tuberosum HOM05D006291 ORTHO05D007669 4.5e-49 198.0 130 78.5
Solyc07g042620.4 Solanum lycopersicum HOM05D006291 ORTHO05D007669 2.9e-48 195.3 126 79.4
Sopen07g022310 Solanum pennellii HOM05D006291 ORTHO05D007669 2.9e-48 195.3 126 79.4
Manes.02G198400 Manihot esculenta HOM05D006291 ORTHO05D007669 3.9e-48 194.9 130 76.2
Aqoxy7G02914 Aquilegia oxysepala HOM05D006291 ORTHO05D007669 1.1e-47 193.4 128 76.6
Actinidia38532 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.5e-47 193.0 130 77.7
Ah.10g032820 Amaranthus hybridus HOM05D006291 ORTHO05D007669 1.9e-47 192.6 130 74.6
Duzib128G2031 Durio zibethinus HOM05D006291 ORTHO05D007669 1.9e-47 192.6 130 76.9
Sc23g0004310 Simmondsia chinensis HOM05D006291 ORTHO05D007669 1.9e-47 192.6 128 76.6
GSVIVG01032270001 Vitis vinifera HOM05D006291 ORTHO05D007669 1.9e-47 192.6 130 77.7
Sabra06G0060300 Salix brachista HOM05D006291 ORTHO05D007669 2.5e-47 192.2 130 76.9
SGA_v2.0_scaffold21G09601 Striga asiatica HOM05D006291 ORTHO05D007669 2.5e-47 192.2 128 75.8
Nn8g40626 Nelumbo nucifera HOM05D006291 ORTHO05D007669 3.3e-47 191.8 130 76.9
Nitab4.5_0003139g0110 Nicotiana tabacum HOM05D006291 ORTHO05D007669 4.3e-47 191.4 130 75.4
Potri.006G079700 Populus trichocarpa HOM05D006291 ORTHO05D007669 4.3e-47 191.4 130 76.2
Duzib128G1629 Durio zibethinus HOM05D006291 ORTHO05D007669 5.6e-47 191.0 130 76.2
Gohir.D05G287200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 5.6e-47 191.0 128 76.6
ECA234G1508 Erigeron canadensis HOM05D006291 ORTHO05D007669 9.5e-47 190.3 130 75.4
Peaxi162Scf00474g00519 Petunia axillaris HOM05D006291 ORTHO05D007669 9.5e-47 190.3 130 75.4
AUR62020734 Chenopodium quinoa HOM05D006291 ORTHO05D007669 1.2e-46 189.9 130 74.6
AUR62027977 Chenopodium quinoa HOM05D006291 ORTHO05D007669 1.2e-46 189.9 130 74.6
EL10Ac2g03616 Beta vulgaris HOM05D006291 ORTHO05D007669 2.1e-46 189.1 130 73.8
COL.COLO4_05650 Corchorus olitorius HOM05D006291 ORTHO05D007669 2.8e-46 188.7 128 76.6
HanXRQChr12g0358571 Helianthus annuus HOM05D006291 ORTHO05D007669 2.8e-46 188.7 130 75.4
Cc06_g23850 Coffea canephora HOM05D006291 ORTHO05D007669 4.7e-46 188.0 128 76.6
HanXRQChr10g0309491 Helianthus annuus HOM05D006291 ORTHO05D007669 4.7e-46 188.0 130 75.4
MSTRG.10473 Avicennia marina HOM05D006291 ORTHO05D007669 6.1e-46 187.6 128 75.0
TAR362G0416 Trochodendron aralioides HOM05D006291 ORTHO05D007669 6.1e-46 187.6 130 73.8
Actinidia02463 Actinidia chinensis HOM05D006291 ORTHO05D007669 8.0e-46 187.2 128 75.0
Gorai.009G302200 Gossypium raimondii HOM05D006291 ORTHO05D007669 8.0e-46 187.2 130 75.4
THA.LOC104826574 Tarenaya hassleriana HOM05D006291 ORTHO05D007669 8.0e-46 187.2 128 75.0
MD13G1231800 Malus domestica HOM05D006291 ORTHO05D007669 1.4e-45 186.4 130 73.8
PGR044G0028 Punica granatum HOM05D006291 ORTHO05D007669 1.4e-45 186.4 130 73.8
Migut.L01922 Erythranthe guttata HOM05D006291 ORTHO05D007669 1.8e-45 186.0 128 74.2
Zm00001eb240760 Zea mays HOM05D006291 ORTHO05D007669 1.8e-45 186.0 128 70.3
PSO170G1648 Papaver somniferum HOM05D006291 ORTHO05D007669 2.3e-45 185.7 128 73.4
Ciclev10009894m.g Citrus clementina HOM05D006291 ORTHO05D007669 4.0e-45 184.9 130 73.1
PSO063G7114 Papaver somniferum HOM05D006291 ORTHO05D007669 5.2e-45 184.5 128 72.7
HPP92_021942 Vanilla planifolia HOM05D006291 ORTHO05D007669 5.2e-45 184.5 130 70.8
Gohir.A05G286200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 6.8e-45 184.1 122 77.0
Carub.0013s0004 Capsella rubella HOM05D006291 ORTHO05D007669 8.9e-45 183.7 128 72.7
CiPaw.16G104700 Carya illinoinensis HOM05D006291 ORTHO05D007669 1.2e-44 183.3 130 73.1
Potri.018G149200 Populus trichocarpa HOM05D006291 ORTHO05D007669 1.2e-44 183.3 130 73.1
CSS0003994 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 2.0e-44 182.6 128 73.4
CSS0013846 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 2.0e-44 182.6 128 73.4
Prupe.1G063000 Prunus persica HOM05D006291 ORTHO05D007669 2.0e-44 182.6 130 73.1
Rhsim01G0107900 Rhododendron simsii HOM05D006291 ORTHO05D007669 2.6e-44 182.2 127 72.4
FAN07G2657 Fragaria x ananassa HOM05D006291 ORTHO05D007669 5.8e-44 181.0 130 70.8
RcHm_v2.0_Chr4g0397141 Rosa chinensis HOM05D006291 ORTHO05D007669 5.8e-44 181.0 130 70.8
Eucgr.G00957 Eucalyptus grandis HOM05D006291 ORTHO05D007669 7.5e-44 180.6 130 70.0
CDE02G3570 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 1.3e-43 179.9 125 73.6
MD16G1236600 Malus domestica HOM05D006291 ORTHO05D007669 1.3e-43 179.9 130 71.5
HPP92_021968 Vanilla planifolia HOM05D006291 ORTHO05D007669 1.7e-43 179.5 127 70.1
CANSAT56G1353 Cannabis sativa HOM05D006291 ORTHO05D007669 2.2e-43 179.1 130 71.5
CDE06G0918 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 2.2e-43 179.1 125 72.8
CsaV3_2G009230 Cucumis sativus L. HOM05D006291 ORTHO05D007669 2.2e-43 179.1 119 76.5
FvH4_4g05950 Fragaria vesca HOM05D006291 ORTHO05D007669 2.2e-43 179.1 130 70.0
FAN22G0966 Fragaria x ananassa HOM05D006291 ORTHO05D007669 2.9e-43 178.7 130 70.0
unitig_8.g3543 Utricularia gibba HOM05D006291 ORTHO05D007669 4.9e-43 177.9 126 72.2
Medtr8g039140 Medicago truncatula HOM05D006291 ORTHO05D007669 8.3e-43 177.2 103 90.3
ATR0580G035 Amborella trichopoda HOM05D006291 ORTHO05D007669 1.1e-42 176.8 126 69.8
Thecc.10G119800 Theobroma cacao HOM05D006291 ORTHO05D007669 1.4e-42 176.4 130 73.1
TWI63G0490 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 1.4e-42 176.4 130 70.8
CANSAT56G3141 Cannabis sativa HOM05D006291 ORTHO05D007669 1.9e-42 176.0 130 70.8
AT2G07340 Arabidopsis thaliana HOM05D006291 ORTHO05D007669 7.0e-42 174.1 128 68.0
CSS0029803 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 9.2e-42 173.7 134 69.4
Sed0008839 Sechium edule HOM05D006291 ORTHO05D007669 1.2e-41 173.3 121 76.0
CDE06G1428 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 4.6e-41 171.4 125 72.0
FAN12G2114 Fragaria x ananassa HOM05D006291 ORTHO05D007669 1.7e-40 169.5 132 67.4
BcaB01g04158 Brassica carinata HOM05D006291 ORTHO05D007669 3.9e-40 168.3 136 64.7
MELO3C003910.2 Cucumis melo HOM05D006291 ORTHO05D007669 3.9e-40 168.3 119 73.1
Sp6g13890 Schrenkiella parvula HOM05D006291 ORTHO05D007669 5.0e-40 167.9 128 69.5
Oeu028819.1 Olea europaea HOM05D006291 ORTHO05D007669 6.6e-40 167.5 112 76.8
Lsat_1_v5_gn_5_80980 Lactuca sativa HOM05D006291 ORTHO05D007669 8.6e-40 167.2 131 71.8
Thhalv10015026m.g Eutrema salsugineum HOM05D006291 ORTHO05D007669 4.3e-39 164.9 128 68.8
Hund19355 Selenicereus undatus HOM05D006291 ORTHO05D007669 9.5e-39 163.7 122 71.3
Aa31LG8G11030 Aethionema arabicum HOM05D006291 ORTHO05D007669 1.6e-38 162.9 171 54.4
BcaC01g06135 Brassica carinata HOM05D006291 ORTHO05D007669 3.6e-38 161.8 128 66.4
A03p16050 Brassica napus HOM05D006291 ORTHO05D007669 3.6e-38 161.8 128 67.2
C03p18890 Brassica napus HOM05D006291 ORTHO05D007669 3.6e-38 161.8 128 66.4
Dinv26485 Davidia involucrata HOM05D006291 ORTHO05D007669 3.7e-35 151.8 125 66.4
Pp3c19_4350 Physcomitrium patens HOM05D006291 ORTHO05D007669 9.2e-34 147.1 128 57.0
DCAR_020455 Daucus carota HOM05D006291 ORTHO05D007669 2.7e-33 145.6 103 72.8
Mapoly0027s0144 Marchantia polymorpha HOM05D006291 ORTHO05D007669 1.0e-32 143.7 128 55.5
MBI16_g09344_MAGBIO Magnolia biondii HOM05D006291 ORTHO05D007669 1.5e-31 139.8 185 47.6
TWI32G0019 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 5.6e-31 137.9 116 63.8
AL3G44130 Arabidopsis lyrata HOM05D006291 ORTHO05D007669 3.6e-30 135.2 98 68.4
Nitab4.5_0000170g0080 Nicotiana tabacum HOM05D006291 ORTHO05D007669 8.1e-30 134.0 96 69.8
Actinidia02472 Actinidia chinensis HOM05D006291 ORTHO05D007669 3.1e-29 132.1 104 64.4
Atru.BG.15.p Acer truncatum HOM05D006291 ORTHO05D007669 1.5e-28 129.8 101 69.3
SMO200G0161 Selaginella moellendorffii HOM05D006291 ORTHO05D007669 4.1e-26 121.7 122 50.8
Dinv12620 Davidia involucrata HOM05D006291 ORTHO05D007669 2.1e-25 119.4 92 66.3
BcaC04g20645 Brassica carinata HOM05D006291 ORTHO05D007669 4.6e-25 118.2 92 66.3
BraA03t10896Z Brassica rapa HOM05D006291 ORTHO05D007669 1.9e-23 112.8 92 65.2
AagrBONN_evm.TU.Sc2ySwM_362.1895 Anthoceros agrestis HOM05D006291 ORTHO05D007669 2.5e-23 112.5 99 52.5
Nitab4.5_0002603g0030 Nicotiana tabacum HOM05D006291 ORTHO05D007669 2.1e-22 109.4 70 77.1
BolC9t56988H Brassica oleracea HOM05D006291 ORTHO05D007669 4.7e-22 108.2 92 63.0
SalBow3G3584 Salvia bowleyana HOM05D006291 ORTHO05D007669 1.8e-21 106.3 105 61.0
C09p41100 Brassica napus HOM05D006291 ORTHO05D007669 2.4e-21 105.9 93 61.3
Os02g0462900 Oryza sativa ssp. japonica HOM05D006291 ORTHO05D007669 2.6e-20 102.4 63 76.2
CARHR104040 Cardamine hirsuta HOM05D006291 ORTHO05D007669 1.9e-18 96.3 79 63.3
BolC3t14280H Brassica oleracea HOM05D006291 ORTHO05D007669 3.2e-18 95.5 62 74.2
ClCG11G011210 Citrullus lanatus HOM05D006291 ORTHO05D007669 3.2e-18 95.5 62 75.8
Cpa.g.sc91.61 Carica papaya HOM05D006291 ORTHO05D007669 3.0e-16 89.0 57 82.5
SEGI_05817 Sequoiadendron giganteum HOM05D006291 ORTHO05D007669 3.9e-16 88.6 62 69.4
Actinidia07563 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.3e-14 83.6 66 63.6
BolC3t14281H Brassica oleracea HOM05D006291 ORTHO05D007669 2.1e-14 82.8 64 65.6
BcaB08g35517 Brassica carinata HOM05D006291 ORTHO05D007669 6.2e-14 81.3 64 64.1
PRCOL_00006384 Prasinoderma coloniale HOM05D006291 ORTHO05D007669 4.4e-12 75.1 117 31.6
MCO11G208 Micromonas commoda HOM05D006291 ORTHO05D007669 1.7e-11 73.2 120 34.2
Haze_19088 Corylus avellana HOM05D000287 ORTHO05D000319 1.3e-08 63.5 38 81.6
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 1.3e-08 63.5 79 54.4
CBR_g16047 Chara braunii HOM05D006291 ORTHO05D007669 8.7e-08 60.8 61 44.3


User provided reference genes

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