Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.15G207000 Glycine max HOM05D007995 ORTHO05D001819 1.3e-91 339.7 175 100.0
Glyma.15G207100 Glycine max HOM05D007995 ORTHO05D001819 2.9e-91 338.6 175 99.4
VMungo0720G2167 Vigna mungo HOM05D007995 ORTHO05D001819 1.8e-48 196.4 178 58.4
Lalb_Chr16g0386221 Lupinus albus HOM05D007995 ORTHO05D001819 4.0e-48 195.3 179 58.7
Lalb_Chr16g0386201 Lupinus albus HOM05D007995 ORTHO05D001819 6.8e-48 194.5 179 58.1
Phvul.007G271600 Phaseolus vulgaris HOM05D007995 ORTHO05D001819 1.3e-46 190.3 174 56.9
Phvul.007G271650 Phaseolus vulgaris HOM05D007995 ORTHO05D001819 1.8e-45 186.4 174 56.3
Lalb_Chr16g0386271 Lupinus albus HOM05D007995 ORTHO05D001819 1.3e-43 180.3 172 57.6
Lalb_Chr04g0256671 Lupinus albus HOM05D007995 ORTHO05D001819 1.7e-43 179.9 176 55.1
Lalb_Chr16g0386301 Lupinus albus HOM05D007995 ORTHO05D001819 8.0e-41 171.0 177 53.1
Lalb_Chr14g0367641 Lupinus albus HOM05D007995 ORTHO05D001819 2.0e-39 166.4 176 52.3
Ca_06775_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 6.4e-38 161.4 177 51.4
Lj3g0018744 Lotus japonicus HOM05D007995 ORTHO05D001819 1.1e-37 160.6 176 51.1
TPR.G32889 Trifolium pratense HOM05D007995 ORTHO05D001819 1.0e-35 154.1 177 51.4
Lalb_Chr16g0386251 Lupinus albus HOM05D007995 ORTHO05D001819 5.0e-35 151.8 168 48.8
arahy.Tifrunner.gnm1.ann1.8T8NTE Arachis hypogaea HOM05D007995 ORTHO05D001819 2.5e-34 149.4 180 47.8
TPR.G36428 Trifolium pratense HOM05D007995 ORTHO05D001819 2.5e-34 149.4 168 49.4
Medtr6g023995 Medicago truncatula HOM05D007995 ORTHO05D001819 2.8e-33 146.0 149 50.3
TPR.G30442 Trifolium pratense HOM05D007995 ORTHO05D001819 3.1e-32 142.5 171 47.4
TPR.G30439 Trifolium pratense HOM05D007995 ORTHO05D001819 6.8e-32 141.4 169 47.9
Lalb_Chr22g0356001 Lupinus albus HOM05D007995 ORTHO05D001819 2.0e-31 139.8 157 51.0
TPR.G16188 Trifolium pratense HOM05D007995 ORTHO05D001819 2.0e-31 139.8 172 48.3
Ca_31166_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 5.8e-31 138.3 154 52.6
Medtr8g032810 Medicago truncatula HOM05D007995 ORTHO05D001819 5.8e-31 138.3 177 46.3
Medtr6g024035 Medicago truncatula HOM05D007995 ORTHO05D001819 7.5e-31 137.9 175 46.3
Lalb_Chr22g0356081 Lupinus albus HOM05D007995 ORTHO05D001819 1.7e-30 136.7 174 43.7
Ca_14013_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 3.7e-30 135.6 169 45.0
Lalb_Chr16g0386281 Lupinus albus HOM05D007995 ORTHO05D001819 6.4e-30 134.8 129 55.8
TPR.G28273 Trifolium pratense HOM05D007995 ORTHO05D001819 1.1e-29 134.0 174 46.0
Medtr4g025010 Medicago truncatula HOM05D007995 ORTHO05D001819 1.4e-29 133.7 173 45.7
Psat1g140040 Pisum sativum HOM05D007995 ORTHO05D001819 1.9e-29 133.3 165 44.2
TPR.G33129 Trifolium pratense HOM05D007995 ORTHO05D001819 2.4e-29 132.9 175 43.4
Medtr6g023905 Medicago truncatula HOM05D007995 ORTHO05D001819 3.2e-29 132.5 176 44.3
Lalb_Chr14g0366281 Lupinus albus HOM05D007995 ORTHO05D001819 9.2e-29 131.0 176 46.6
TPR.G16193 Trifolium pratense HOM05D007995 ORTHO05D001819 1.6e-28 130.2 173 45.1
Medtr6g023935 Medicago truncatula HOM05D007995 ORTHO05D001819 2.0e-28 129.8 171 43.9
Ca_17116_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 7.8e-28 127.9 170 43.5
Psat1g086800 Pisum sativum HOM05D007995 ORTHO05D001819 1.0e-27 127.5 174 44.8
Ca_31346_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 1.3e-27 127.1 169 43.2
Ca_31352_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 1.7e-27 126.7 169 42.0
Medtr6g024020 Medicago truncatula HOM05D007995 ORTHO05D001819 2.3e-27 126.3 177 44.6
Medtr6g024040 Medicago truncatula HOM05D007995 ORTHO05D001819 2.3e-27 126.3 182 42.9
Ca_30953_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 5.0e-27 125.2 169 42.0
Medtr6g024185 Medicago truncatula HOM05D007995 ORTHO05D001819 7.3e-26 121.3 168 39.9
Psat3g149840 Pisum sativum HOM05D007995 ORTHO05D001819 2.1e-25 119.8 170 43.5
Lalb_Chr14g0366251 Lupinus albus HOM05D007995 ORTHO05D001819 8.1e-25 117.9 170 38.2
Medtr6g024180 Medicago truncatula HOM05D007995 ORTHO05D001819 8.1e-25 117.9 172 40.7
Ca_26896_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 1.1e-24 117.5 154 42.9
TPR.G18497 Trifolium pratense HOM05D007995 ORTHO05D001819 1.1e-24 117.5 114 53.5
Medtr6g023915 Medicago truncatula HOM05D007995 ORTHO05D001819 1.4e-24 117.1 171 40.9
TPR.G22073 Trifolium pratense HOM05D007995 ORTHO05D001819 7.5e-23 111.3 169 40.2
Lalb_Chr14g0366261 Lupinus albus HOM05D007995 ORTHO05D001819 9.8e-23 110.9 176 40.9
Ca_28343_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 2.2e-22 109.8 175 41.1
Medtr5g095680 Medicago truncatula HOM05D007995 ORTHO05D001819 9.2e-21 104.4 178 39.3
ClCG09G008860 Citrullus lanatus HOM05D003146 ORTHO05D001819 3.3e-18 95.9 149 39.6
MELO3C019867.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.8e-17 92.8 166 33.7
THA.LOC104816708 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 8.1e-17 91.3 168 35.7
Sed0025500 Sechium edule HOM05D003146 ORTHO05D001819 1.4e-16 90.5 163 35.6
CARHR037660 Cardamine hirsuta HOM05D003146 ORTHO05D001819 1.8e-16 90.1 127 38.6
MELO3C019866.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.8e-16 90.1 166 33.7
THA.LOC104820282 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.8e-16 90.1 168 35.1
CsaV3_UNG225750 Cucumis sativus L. HOM05D003146 ORTHO05D001819 2.3e-16 89.7 166 34.3
QL04p007223 Quercus lobata HOM05D003146 ORTHO05D001819 2.3e-16 89.7 172 36.0
MELO3C025842.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.1e-16 89.4 174 32.8
CsaV3_UNG084670 Cucumis sativus L. HOM05D003146 ORTHO05D001819 3.1e-16 89.4 164 34.8
CsaV3_UNG132030 Cucumis sativus L. HOM05D003146 ORTHO05D001819 3.1e-16 89.4 164 34.8
Psat1g087920 Pisum sativum HOM05D007995 ORTHO05D001819 3.1e-16 89.4 182 34.1
MELO3C019860.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.0e-16 89.0 166 33.1
MELO3C035196.2 Cucumis melo HOM05D003146 ORTHO05D001819 6.8e-16 88.2 126 40.5
MELO3C000643.2 Cucumis melo HOM05D003146 ORTHO05D001819 8.9e-16 87.8 166 32.5
MELO3C030065.2 Cucumis melo HOM05D003146 ORTHO05D001819 8.9e-16 87.8 166 33.7
THA.LOC104817105 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 8.9e-16 87.8 168 34.5
AL1G54540 Arabidopsis lyrata HOM05D003146 ORTHO05D001819 1.2e-15 87.4 127 37.8
AL1G54590 Arabidopsis lyrata HOM05D003146 ORTHO05D001819 1.2e-15 87.4 127 37.8
THA.LOC104825373 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.2e-15 87.4 168 34.5
AT1G48020 Arabidopsis thaliana HOM05D003146 ORTHO05D001819 2.6e-15 86.3 166 33.7
ClCG11G011230 Citrullus lanatus HOM05D003146 ORTHO05D001819 2.6e-15 86.3 145 33.8
MELO3C001332.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.6e-15 86.3 166 33.7
MELO3C028122.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.6e-15 86.3 166 33.7
MELO3C030075.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.6e-15 86.3 144 34.0
arahy.Tifrunner.gnm1.ann1.I3WRP4 Arachis hypogaea HOM05D007995 ORTHO05D001819 4.4e-15 85.5 142 37.3
MELO3C027265.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.4e-15 85.5 172 33.7
MELO3C034932.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.4e-15 85.5 163 32.5
CsaV3_2G000020 Cucumis sativus L. HOM05D003146 ORTHO05D001819 4.4e-15 85.5 165 33.9
MELO3C027590.2 Cucumis melo HOM05D003146 ORTHO05D001819 5.8e-15 85.1 160 32.5
THA.LOC104802648 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 5.8e-15 85.1 181 35.9
MELO3C027585.2 Cucumis melo HOM05D003146 ORTHO05D001819 9.9e-15 84.3 163 31.9
MELO3C000387.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.3e-14 84.0 166 32.5
MELO3C030067.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.7e-14 83.6 166 32.5
QL06p013378 Quercus lobata HOM05D003146 ORTHO05D001819 1.7e-14 83.6 174 34.5
MELO3C019864.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.2e-14 83.2 166 32.5
MELO3C028017.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.2e-14 83.2 146 33.6
CsaV3_4G038000 Cucumis sativus L. HOM05D003146 ORTHO05D001819 2.9e-14 82.8 160 33.1
CsaV3_6G023780 Cucumis sativus L. HOM05D003146 ORTHO05D001819 2.9e-14 82.8 160 33.1
CsaV3_UNG007100 Cucumis sativus L. HOM05D003146 ORTHO05D001819 2.9e-14 82.8 160 33.1
CsaV3_UNG217460 Cucumis sativus L. HOM05D003146 ORTHO05D001819 2.9e-14 82.8 160 33.1
CsaV3_UNG235420 Cucumis sativus L. HOM05D003146 ORTHO05D001819 2.9e-14 82.8 160 33.1
Sp1g35000 Schrenkiella parvula HOM05D003146 ORTHO05D001819 3.7e-14 82.4 127 36.2
THA.LOC104808963 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 4.9e-14 82.0 166 34.9
MELO3C032509.2 Cucumis melo HOM05D003146 ORTHO05D001819 8.4e-14 81.3 166 31.9
Carub.0001s3713 Capsella rubella HOM05D003146 ORTHO05D001819 1.1e-13 80.9 166 33.1
MELO3C034867.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.1e-13 80.9 166 31.9
MELO3C027828.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.4e-13 80.5 161 31.7
MELO3C032417.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.4e-13 80.5 166 31.9
MELO3C027398.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.9e-13 80.1 163 31.3
MELO3C030064.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.9e-13 80.1 166 31.9
Thhalv10011818m.g Eutrema salsugineum HOM05D003146 ORTHO05D001819 1.9e-13 80.1 127 35.4
CAN.G338.39 Capsicum annuum HOM05D003146 ORTHO05D001819 2.4e-13 79.7 171 31.6
Medtr6g023895 Medicago truncatula HOM05D007995 ORTHO05D001819 3.2e-13 79.3 83 55.4
BcaB02g11337 Brassica carinata HOM05D003146 ORTHO05D001819 4.1e-13 79.0 165 33.3
MELO3C027044.2 Cucumis melo HOM05D003146 ORTHO05D001819 5.4e-13 78.6 166 31.3
Cc11_g04920 Coffea canephora HOM05D003146 ORTHO05D001819 7.1e-13 78.2 175 32.6
Haze_03215 Corylus avellana HOM05D003146 ORTHO05D001819 7.1e-13 78.2 145 33.8
QL08p052685 Quercus lobata HOM05D003146 ORTHO05D001819 7.1e-13 78.2 176 35.8
QL08p052692 Quercus lobata HOM05D003146 ORTHO05D001819 7.1e-13 78.2 176 35.8
ClCG06G004590 Citrullus lanatus HOM05D003146 ORTHO05D001819 1.2e-12 77.4 107 38.3
PGSC0003DMG400003833 Solanum tuberosum HOM05D003146 ORTHO05D001819 1.6e-12 77.0 155 31.6
BcaC05g27598 Brassica carinata HOM05D003146 ORTHO05D001819 2.1e-12 76.6 165 33.3
A08p05340 Brassica napus HOM05D003146 ORTHO05D001819 2.1e-12 76.6 170 32.9
C05p35840 Brassica napus HOM05D003146 ORTHO05D001819 2.1e-12 76.6 165 33.3
BolC5t32301H Brassica oleracea HOM05D003146 ORTHO05D001819 2.1e-12 76.6 165 33.3
BraSC267t45946Z Brassica rapa HOM05D003146 ORTHO05D001819 2.1e-12 76.6 170 32.9
MELO3C001272.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.1e-12 76.6 128 34.4
Sopen09g028760 Solanum pennellii HOM05D003146 ORTHO05D001819 2.1e-12 76.6 155 30.3
MELO3C034829.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.7e-12 76.3 146 32.9
Sed0022729 Sechium edule HOM05D003146 ORTHO05D001819 2.7e-12 76.3 147 34.7
Solyc03g112180.1 Solanum lycopersicum HOM05D003146 ORTHO05D001819 2.7e-12 76.3 168 33.9
Actinidia18484 Actinidia chinensis HOM05D003146 ORTHO05D001819 3.5e-12 75.9 149 31.5
BcaC07g37182 Brassica carinata HOM05D003146 ORTHO05D001819 3.5e-12 75.9 170 32.4
BcaB04g17471 Brassica carinata HOM05D003146 ORTHO05D001819 4.6e-12 75.5 166 31.9
BolC8t47376H Brassica oleracea HOM05D003146 ORTHO05D001819 4.6e-12 75.5 170 32.9
A05p21240 Brassica napus HOM05D003146 ORTHO05D001819 7.8e-12 74.7 165 32.7
Hma1.2p1_1096F.1_g256660 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 7.8e-12 74.7 168 32.1
MELO3C027589.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.0e-11 74.3 128 33.6
C08p05630 Brassica napus HOM05D003146 ORTHO05D001819 1.7e-11 73.6 170 32.4
Lalb_Chr14g0366241 Lupinus albus HOM05D007995 ORTHO05D001819 2.3e-11 73.2 89 48.3
BraA05t21032Z Brassica rapa HOM05D003146 ORTHO05D001819 3.0e-11 72.8 165 32.1
MELO3C019686.2 Cucumis melo HOM05D003146 ORTHO05D001819 5.1e-11 72.0 170 30.6
Migut.K00088 Erythranthe guttata HOM05D011410 ORTHO05D013015 5.1e-11 72.0 146 29.5
Medtr6g024195 Medicago truncatula HOM05D007995 ORTHO05D001819 2.5e-10 69.7 181 31.5
MSTRG.10815 Avicennia marina HOM05D011410 ORTHO05D013015 5.6e-10 68.6 165 29.1
MELO3C028053.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.2e-09 67.4 131 30.5
CsaV3_6G020170 Cucumis sativus L. HOM05D003146 ORTHO05D001819 2.8e-09 66.2 116 33.6
Medtr0155s0080 Medicago truncatula HOM05D007995 ORTHO05D001819 2.8e-09 66.2 184 31.0
ClCG07G004740 Citrullus lanatus HOM05D003146 ORTHO05D001819 6.2e-09 65.1 168 28.0
Carub.0004s0393 Capsella rubella HOM05D008385 ORTHO05D010806 8.1e-09 64.7 176 30.7
Ca_28472_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 8.1e-09 64.7 76 48.7
SalBow3G0301 Salvia bowleyana HOM05D011410 ORTHO05D013015 8.1e-09 64.7 129 32.6
PGSC0003DMG400040362 Solanum tuberosum HOM05D003146 ORTHO05D001819 1.8e-08 63.5 176 27.3
CsaV3_6G022330 Cucumis sativus L. HOM05D003146 ORTHO05D001819 5.2e-08 62.0 114 30.7
Hma1.2p1_3273F.1_g334810 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 8.9e-08 61.2 101 34.7
Hma1.2p1_3469F.1_g336200 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 8.9e-08 61.2 101 34.7
CsaV3_UNG044260 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.5e-07 60.5 95 33.7
CsaV3_UNG083670 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.5e-07 60.5 95 33.7
Carub.0006s3013 Capsella rubella HOM05D008385 ORTHO05D010806 2.0e-07 60.1 183 28.4
Migut.I00083 Erythranthe guttata HOM05D011410 ORTHO05D013015 2.0e-07 60.1 149 27.5
Lj1g0000753 Lotus japonicus HOM05D003146 ORTHO05D001819 2.0e-07 60.1 165 27.3
Medtr6g024050 Medicago truncatula HOM05D007995 ORTHO05D001819 2.0e-07 60.1 184 31.0
Sp3g15430 Schrenkiella parvula HOM05D003146 ORTHO05D001819 3.4e-07 59.3 166 27.1
MELO3C027625.2 Cucumis melo HOM05D003146 ORTHO05D001819 5.8e-07 58.5 122 32.0
CAN.G111.34 Capsicum annuum HOM05D011410 ORTHO05D013015 7.6e-07 58.2 135 31.1
PGSC0003DMG400047259 Solanum tuberosum HOM05D014661 ORTHO05D018081 7.6e-07 58.2 177 25.4
Ah.01g010410 Amaranthus hybridus HOM05D001445 ORTHO05D001261 9.9e-07 57.8 103 34.0
Ca_30975_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 1.3e-06 57.4 110 34.5
MELO3C028207.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.3e-06 57.4 105 32.4
PGSC0003DMG400037953 Solanum tuberosum HOM05D014661 ORTHO05D018081 1.7e-06 57.0 166 26.5
DCAR_030437 Daucus carota HOM05D003146 ORTHO05D001819 4.9e-06 55.5 117 25.6
PGSC0003DMG400018189 Solanum tuberosum HOM05D003146 ORTHO05D001819 4.9e-06 55.5 101 35.6
MELO3C034826.2 Cucumis melo HOM05D003146 ORTHO05D001819 6.4e-06 55.1 92 32.6
Medtr6g025520 Medicago truncatula HOM05D007995 ORTHO05D001819 6.4e-06 55.1 181 27.6


User provided reference genes

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