Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.15G205500 Glycine max HOM05D003067 ORTHO05D009378 1.6e-97 359.4 180 100.0
Lj6g0006451 Lotus japonicus HOM05D003067 ORTHO05D009378 9.7e-58 227.3 182 68.1
Medtr2g450220 Medicago truncatula HOM05D003067 ORTHO05D009378 6.1e-52 208.0 237 49.8
CiPaw.16G115000 Carya illinoinensis HOM05D003067 ORTHO05D009378 3.2e-37 159.1 232 41.4
Cfa020848 Carpinus fangiana HOM05D003067 ORTHO05D007251 4.8e-33 145.2 231 39.8
Hma1.2p1_0028F.1_g017380 Hydrangea macrophylla HOM05D003067 ORTHO05D009378 1.6e-31 140.2 222 40.1
Haze_19237 Corylus avellana HOM05D003067 ORTHO05D009378 3.5e-31 139.0 252 37.3
QL02p092630 Quercus lobata HOM05D003067 ORTHO05D009378 5.0e-30 135.2 248 38.7
Manes.14G112000 Manihot esculenta HOM05D003067 ORTHO05D009378 2.8e-28 129.4 230 34.8
RcHm_v2.0_Chr2g0085991 Rosa chinensis HOM05D003067 ORTHO05D009378 2.8e-28 129.4 234 38.9
Nn2g12305 Nelumbo nucifera HOM05D003067 ORTHO05D009378 1.4e-27 127.1 238 36.6
Atru.chr7.146 Acer truncatum HOM05D003067 ORTHO05D009378 2.3e-27 126.3 221 35.3
Prupe.7G260000 Prunus persica HOM05D003067 ORTHO05D009378 2.3e-27 126.3 220 40.9
TWI34G0508 Tripterygium wilfordii HOM05D003067 ORTHO05D009378 1.5e-26 123.6 238 36.1
CANSAT11G2322 Cannabis sativa HOM05D003067 ORTHO05D009378 4.4e-26 122.1 235 35.7
FvH4_1g01190 Fragaria vesca HOM05D003067 ORTHO05D009378 6.3e-25 118.2 232 36.6
FAN28G0267 Fragaria x ananassa HOM05D003067 ORTHO05D009378 8.3e-25 117.9 232 36.2
Thecc.09G033900 Theobroma cacao HOM05D003067 ORTHO05D009378 8.3e-25 117.9 237 32.1
Duzib150G0133 Durio zibethinus HOM05D003067 ORTHO05D009378 1.4e-24 117.1 237 33.3
Aqoxy7G03467 Aquilegia oxysepala HOM05D003067 ORTHO05D009378 3.1e-24 115.9 236 34.3
Potri.006G187500 Populus trichocarpa HOM05D003067 ORTHO05D009378 3.1e-24 115.9 237 34.6
Ciclev10009097m.g Citrus clementina HOM05D003067 ORTHO05D009378 4.1e-24 115.5 225 33.8
Gohir.D07G030100 Gossypium hirsutum HOM05D003067 ORTHO05D009378 4.1e-24 115.5 237 32.5
MBI14_g05269_MAGBIO Magnolia biondii HOM05D003067 ORTHO05D009378 7.0e-24 114.8 120 47.5
Eucgr.C00366 Eucalyptus grandis HOM05D003067 ORTHO05D009378 2.7e-23 112.8 238 34.0
Gohir.A07G026200 Gossypium hirsutum HOM05D003067 ORTHO05D009378 3.5e-23 112.5 237 32.5
Gorai.001G031300 Gossypium raimondii HOM05D003067 ORTHO05D009378 5.9e-23 111.7 238 32.4
Potri.018G110300 Populus trichocarpa HOM05D003067 ORTHO05D009378 1.3e-22 110.5 235 32.3
Cc06_g15260 Coffea canephora HOM05D003067 ORTHO05D009378 1.7e-22 110.2 234 36.8
Carub.0007s0954 Capsella rubella HOM05D003067 ORTHO05D009378 5.6e-21 105.1 228 33.3
FAN23G1864 Fragaria x ananassa HOM05D003779 ORTHO05D002678 5.6e-21 105.1 173 41.0
Oeu021253.1 Olea europaea HOM05D003067 ORTHO05D009378 1.2e-20 104.0 229 33.2
AL7G21080 Arabidopsis lyrata HOM05D003067 ORTHO05D009378 3.6e-20 102.4 231 35.1
Dinv41400 Davidia involucrata HOM05D003067 ORTHO05D009378 3.6e-20 102.4 223 32.7
PGR142G2789 Punica granatum HOM05D003067 ORTHO05D009378 6.1e-20 101.7 238 30.7
Actinidia38680 Actinidia chinensis HOM05D003067 ORTHO05D009378 1.0e-19 100.9 228 32.0
Oeu043496.1 Olea europaea HOM05D003067 ORTHO05D009378 1.0e-19 100.9 176 38.6
BcaNung03423 Brassica carinata HOM05D003067 ORTHO05D009378 1.4e-19 100.5 228 32.5
CsaV3_2G003640 Cucumis sativus L. HOM05D003067 ORTHO05D009378 1.4e-19 100.5 230 31.7
Oeu043497.1 Olea europaea HOM05D003067 ORTHO05D009378 1.4e-19 100.5 176 38.6
C01p07950 Brassica napus HOM05D003067 ORTHO05D009378 3.0e-19 99.4 228 33.3
BolC1t00782H Brassica oleracea HOM05D003067 ORTHO05D009378 3.0e-19 99.4 228 33.3
Thhalv10025917m.g Eutrema salsugineum HOM05D003067 ORTHO05D009378 5.2e-19 98.6 231 32.9
BcaC09g51887 Brassica carinata HOM05D003067 ORTHO05D009378 6.8e-19 98.2 228 32.9
A01p07190 Brassica napus HOM05D003067 ORTHO05D009378 1.5e-18 97.1 228 32.0
GSVIVG01003733001 Vitis vinifera HOM05D003067 ORTHO05D009378 2.0e-18 96.7 121 43.8
Sp7g28870 Schrenkiella parvula HOM05D003067 ORTHO05D009378 3.4e-18 95.9 228 32.5
CAN.G551.28 Capsicum annuum HOM05D003067 ORTHO05D009378 7.5e-18 94.7 236 31.4
Sopen12g005120 Solanum pennellii HOM05D003067 ORTHO05D009378 2.2e-17 93.2 229 31.9
Rhsim03G0256100 Rhododendron simsii HOM05D003779 ORTHO05D002678 2.9e-17 92.8 221 33.5
BraA01t00670Z Brassica rapa HOM05D003067 ORTHO05D009378 4.9e-17 92.0 228 31.1
Nitab4.5_0001478g0120 Nicotiana tabacum HOM05D003067 ORTHO05D009378 4.9e-17 92.0 236 30.5
HanXRQChr05g0133261 Helianthus annuus HOM05D003067 ORTHO05D009378 6.4e-17 91.7 221 33.0
Os06g0183700 Oryza sativa ssp. japonica HOM05D003067 ORTHO05D009378 6.4e-17 91.7 119 37.8
ATR1153G020 Amborella trichopoda HOM05D003067 ORTHO05D009378 1.4e-16 90.5 234 26.9
MSTRG.6118 Avicennia marina HOM05D003067 ORTHO05D009378 2.4e-16 89.7 236 31.4
MELO3C004431.2 Cucumis melo HOM05D003067 ORTHO05D009378 5.4e-16 88.6 175 33.1
DCAR_014819 Daucus carota HOM05D003067 ORTHO05D009378 5.4e-16 88.6 260 27.7
FAN19G0469 Fragaria x ananassa HOM05D003067 ORTHO05D009378 5.4e-16 88.6 114 48.2
CDE06G1077 Ceratophyllum demersum HOM05D003067 ORTHO05D009378 1.6e-15 87.0 237 30.0
Solyc12g010230.2 Solanum lycopersicum HOM05D003067 ORTHO05D009378 1.6e-15 87.0 236 30.1
Migut.J01329 Erythranthe guttata HOM05D003067 ORTHO05D009378 5.9e-15 85.1 204 32.4
COL.COLO4_18774 Corchorus olitorius HOM05D003067 ORTHO05D009378 1.7e-14 83.6 122 41.0
ClCG02G017140 Citrullus lanatus HOM05D003067 ORTHO05D009378 3.9e-14 82.4 120 39.2
AT4G30993 Arabidopsis thaliana HOM05D003067 ORTHO05D009378 6.6e-14 81.6 119 43.7
Zm00001eb374750 Zea mays HOM05D003067 ORTHO05D009378 8.6e-14 81.3 162 30.9
THA.LOC104803568 Tarenaya hassleriana HOM05D003067 ORTHO05D009378 3.3e-13 79.3 232 27.6
Cpa.g.sc46.125 Carica papaya HOM05D003067 ORTHO05D009378 6.2e-12 75.1 143 34.3
HPP92_017493 Vanilla planifolia HOM05D003067 ORTHO05D009378 6.2e-12 75.1 230 28.7
Sabra18G0093300 Salix brachista HOM05D003067 ORTHO05D009378 1.1e-11 74.3 293 25.3
Peaxi162Scf00108g00714 Petunia axillaris HOM05D003067 ORTHO05D009378 4.0e-11 72.4 237 28.3
SGA_v2.0_scaffold265G46124 Striga asiatica HOM05D003067 ORTHO05D009378 2.0e-10 70.1 223 29.1
SalBow1G0452 Salvia bowleyana HOM05D003067 ORTHO05D009378 1.3e-09 67.4 198 29.3
CARHR238890 Cardamine hirsuta HOM05D003067 ORTHO05D009378 1.7e-09 67.0 113 37.2
MD02G1010100 Malus domestica HOM05D003067 ORTHO05D009378 3.5e-07 59.3 214 26.6


User provided reference genes

Program Settings