Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.15G192800 Glycine max HOM05D004072 ORTHO05D005933 1.5e-293 1012.3 597 100.0
Phvul.009G217700 Phaseolus vulgaris HOM05D004072 ORTHO05D005933 5.6e-203 711.4 582 72.9
Lj6g0006190 Lotus japonicus HOM05D004072 ORTHO05D005933 3.4e-192 675.6 587 71.0
Ca_02513_v3 Cicer arietinum L. HOM05D004072 ORTHO05D005933 9.0e-185 651.0 565 70.4
Lalb_Chr08g0233191 Lupinus albus HOM05D004072 ORTHO05D005933 5.5e-182 641.7 617 62.2
Medtr2g048210 Medicago truncatula HOM05D004072 ORTHO05D005933 1.2e-181 640.6 571 69.4
TPR.G28615 Trifolium pratense HOM05D004072 ORTHO05D005933 5.1e-180 635.2 572 68.5
arahy.Tifrunner.gnm1.ann1.39P5NE Arachis hypogaea HOM05D004072 ORTHO05D005933 5.0e-175 618.6 533 71.9
Atru.chr10.895 Acer truncatum HOM05D004072 ORTHO05D005933 1.4e-166 590.5 587 62.7
RcHm_v2.0_Chr5g0015701 Rosa chinensis HOM05D004072 ORTHO05D005933 4.2e-166 589.0 600 62.0
MD10G1254200 Malus domestica HOM05D004072 ORTHO05D005933 2.1e-165 586.6 606 61.9
arahy.Tifrunner.gnm1.ann1.WCP5HM Arachis hypogaea HOM05D004072 ORTHO05D005933 8.8e-164 581.3 595 60.7
FAN16G0609 Fragaria x ananassa HOM05D004072 ORTHO05D005933 1.9e-158 563.5 604 60.4
FAN21G2972 Fragaria x ananassa HOM05D004072 ORTHO05D005933 5.5e-158 562.0 605 60.5
FAN11G0415 Fragaria x ananassa HOM05D004072 ORTHO05D005933 7.2e-158 561.6 617 59.5
FvH4_3g09950 Fragaria vesca HOM05D004072 ORTHO05D005933 9.4e-158 561.2 617 59.5
Gohir.A01G139400 Gossypium hirsutum HOM05D004072 ORTHO05D005933 3.6e-157 559.3 602 59.1
PGR031G0553 Punica granatum HOM05D004072 ORTHO05D005933 8.0e-157 558.1 609 59.1
CiPaw.10G086200 Carya illinoinensis HOM05D004072 ORTHO05D005933 2.3e-156 556.6 605 59.8
CiPaw.09G116100 Carya illinoinensis HOM05D004072 ORTHO05D005933 3.0e-156 556.2 603 59.9
GSVIVG01021613001 Vitis vinifera HOM05D004072 ORTHO05D005933 3.3e-155 552.7 590 58.8
Haze_05771 Corylus avellana HOM05D004072 ORTHO05D005933 1.7e-154 550.4 601 58.7
MD05G1274500 Malus domestica HOM05D004072 ORTHO05D005933 2.2e-154 550.1 600 58.3
FAN25G0515 Fragaria x ananassa HOM05D004072 ORTHO05D005933 3.7e-154 549.3 602 59.6
Potri.011G090200 Populus trichocarpa HOM05D004072 ORTHO05D005933 3.7e-154 549.3 540 61.7
Aa31LG10G6650 Aethionema arabicum HOM05D004072 ORTHO05D005933 1.4e-153 547.4 597 58.5
Thecc.02G012200 Theobroma cacao HOM05D004072 ORTHO05D005933 2.4e-153 546.6 611 57.1
Manes.06G055700 Manihot esculenta HOM05D004072 ORTHO05D005933 3.1e-153 546.2 602 59.3
DCAR_003864 Daucus carota HOM05D004072 ORTHO05D005933 4.1e-153 545.8 582 58.6
Nn3g20249 Nelumbo nucifera HOM05D004072 ORTHO05D005933 7.0e-153 545.0 589 60.1
TAR626G0585 Trochodendron aralioides HOM05D004072 ORTHO05D005933 1.2e-152 544.3 597 59.1
Duzib132G0425 Durio zibethinus HOM05D004072 ORTHO05D005933 1.6e-152 543.9 630 56.8
TAR627G0650 Trochodendron aralioides HOM05D004072 ORTHO05D005933 1.6e-152 543.9 605 60.3
MELO3C007083.2 Cucumis melo HOM05D004072 ORTHO05D005933 2.6e-152 543.1 602 60.3
CsaV3_6G052280 Cucumis sativus L. HOM05D004072 ORTHO05D005933 5.9e-152 542.0 583 60.7
Potri.001G357700 Populus trichocarpa HOM05D004072 ORTHO05D005933 1.0e-151 541.2 488 65.6
Prupe.4G089200 Prunus persica HOM05D004072 ORTHO05D005933 2.9e-151 539.7 603 60.2
Duzib052G1035 Durio zibethinus HOM05D004072 ORTHO05D005933 1.1e-150 537.7 592 57.4
Sabra16G0235400 Salix brachista HOM05D004072 ORTHO05D005933 1.9e-150 537.0 583 58.0
Thhalv10016130m.g Eutrema salsugineum HOM05D004072 ORTHO05D005933 8.0e-149 531.6 585 58.3
Actinidia07470 Actinidia chinensis HOM05D004072 ORTHO05D005933 1.8e-148 530.4 580 58.4
Oeu040089.1 Olea europaea HOM05D004072 ORTHO05D005933 1.8e-148 530.4 598 57.0
C03p22430 Brassica napus HOM05D004072 ORTHO05D005933 8.8e-148 528.1 591 57.9
CANSAT35G1345 Cannabis sativa HOM05D004072 ORTHO05D005933 1.2e-147 527.7 604 59.6
Eucgr.E02482 Eucalyptus grandis HOM05D004072 ORTHO05D005933 1.2e-147 527.7 585 57.8
Dinv32181 Davidia involucrata HOM05D004072 ORTHO05D005933 9.7e-147 524.6 610 57.0
Manes.14G122228 Manihot esculenta HOM05D004072 ORTHO05D005933 9.7e-147 524.6 603 60.5
SalBow8G4752 Salvia bowleyana HOM05D004072 ORTHO05D005933 6.3e-146 521.9 602 55.8
AL4G30670 Arabidopsis lyrata HOM05D004072 ORTHO05D005933 8.2e-146 521.5 597 57.1
Cc09_g08230 Coffea canephora HOM05D004072 ORTHO05D005933 8.2e-146 521.5 595 60.8
Glyma.09G084500 Glycine max HOM05D004072 ORTHO05D005933 2.4e-145 520.0 376 83.8
Sp4g16960 Schrenkiella parvula HOM05D004072 ORTHO05D005933 2.0e-144 516.9 602 56.6
BraA03t11178Z Brassica rapa HOM05D004072 ORTHO05D005933 2.7e-144 516.5 596 56.7
A03p19230 Brassica napus HOM05D004072 ORTHO05D005933 1.0e-143 514.6 598 56.4
CSS0029738 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 1.3e-143 514.2 607 56.5
Gorai.002G162800 Gossypium raimondii HOM05D004072 ORTHO05D005933 2.2e-143 513.5 628 53.7
QL05p053312 Quercus lobata HOM05D004072 ORTHO05D005933 3.8e-143 512.7 732 50.4
CAN.G660.42 Capsicum annuum HOM05D004072 ORTHO05D005933 8.5e-143 511.5 551 59.5
PSO541G2055 Papaver somniferum HOM05D004072 ORTHO05D005933 1.9e-142 510.4 573 57.2
Sed0022754 Sechium edule HOM05D004072 ORTHO05D005933 1.9e-142 510.4 577 57.9
TWI73G0101 Tripterygium wilfordii HOM05D004072 ORTHO05D005933 4.2e-142 509.2 597 57.0
Nitab4.5_0008398g0020 Nicotiana tabacum HOM05D004072 ORTHO05D005933 7.2e-142 508.4 586 56.1
PSO675G3632 Papaver somniferum HOM05D004072 ORTHO05D005933 2.7e-141 506.5 575 57.4
THA.LOC104798608 Tarenaya hassleriana HOM05D004072 ORTHO05D005933 2.7e-141 506.5 604 56.6
Sopen02g019350 Solanum pennellii HOM05D004072 ORTHO05D005933 1.4e-140 504.2 582 56.0
MSTRG.16285 Avicennia marina HOM05D004072 ORTHO05D005933 1.8e-140 503.8 571 56.0
BolC3t14626H Brassica oleracea HOM05D004072 ORTHO05D005933 2.3e-140 503.4 602 55.1
Gohir.D01G131100 Gossypium hirsutum HOM05D004072 ORTHO05D005933 6.8e-140 501.9 625 53.4
THA.LOC104813323 Tarenaya hassleriana HOM05D004072 ORTHO05D005933 1.5e-139 500.7 602 54.8
AT2G34680 Arabidopsis thaliana HOM05D004072 ORTHO05D005933 2.0e-139 500.4 566 57.1
Peaxi162Scf00670g00114 Petunia axillaris HOM05D004072 ORTHO05D005933 2.0e-139 500.4 569 57.3
Nitab4.5_0001181g0040 Nicotiana tabacum HOM05D004072 ORTHO05D005933 3.4e-139 499.6 586 55.8
Solyc02g070260.4 Solanum lycopersicum HOM05D004072 ORTHO05D005933 4.4e-139 499.2 582 56.2
Carub.0004s1637 Capsella rubella HOM05D004072 ORTHO05D005933 9.8e-139 498.0 598 54.3
Ah.14g086190 Amaranthus hybridus HOM05D004072 ORTHO05D005933 6.3e-138 495.4 563 57.5
ClCG01G025080 Citrullus lanatus HOM05D004072 ORTHO05D005933 8.3e-138 495.0 655 54.0
Aqoxy1G01646_Aqoxy1G01645 Aquilegia oxysepala HOM05D004072 ORTHO05D005933 2.4e-137 493.4 615 54.5
ATR0165G006 Amborella trichopoda HOM05D004072 ORTHO05D005933 5.9e-136 488.8 630 53.0
Psat1g019120 Pisum sativum HOM05D004072 ORTHO05D005933 5.5e-134 482.3 295 87.5
AUR62038603 Chenopodium quinoa HOM05D004072 ORTHO05D005933 2.1e-133 480.3 566 56.0
Migut.M01885 Erythranthe guttata HOM05D004072 ORTHO05D005933 2.1e-133 480.3 611 52.4
HanXRQChr04g0119071 Helianthus annuus HOM05D004072 ORTHO05D005933 2.1e-133 480.3 586 54.3
ECA236G2867 Erigeron canadensis HOM05D004072 ORTHO05D005933 3.6e-133 479.6 583 56.4
Sc24g0001460 Simmondsia chinensis HOM05D004072 ORTHO05D005933 1.2e-131 474.6 567 55.4
Rhsim13G0119900 Rhododendron simsii HOM05D004072 ORTHO05D005933 2.0e-131 473.8 602 55.5
EL10Ac8g19581 Beta vulgaris HOM05D004072 ORTHO05D005933 1.3e-130 471.1 573 55.8
SGA_v2.0_scaffold223G42858 Striga asiatica HOM05D004072 ORTHO05D005933 4.1e-129 466.1 597 56.6
Lsat_1_v5_gn_7_29400 Lactuca sativa HOM05D004072 ORTHO05D005933 2.6e-123 446.8 586 49.7
BcaC01g05784 Brassica carinata HOM05D004072 ORTHO05D005933 3.4e-123 446.4 321 76.0
COL.COLO4_17682 Corchorus olitorius HOM05D004072 ORTHO05D005933 2.5e-118 430.3 600 47.2
CDE02G4494 Ceratophyllum demersum HOM05D004072 ORTHO05D005933 1.6e-117 427.6 450 59.3
HPP92_000967 Vanilla planifolia HOM05D004072 ORTHO05D005933 2.1e-117 427.2 562 50.0
vmacro03398 Vaccinium macrocarpon HOM05D004072 ORTHO05D005933 9.8e-115 418.3 600 52.5
Zm00001eb299970 Zea mays HOM05D004072 ORTHO05D005933 1.2e-112 411.4 505 52.9
AUR62042015 Chenopodium quinoa HOM05D004072 ORTHO05D005933 2.1e-112 410.6 583 49.9
Lj1A1163T36 Lonicera japonica HOM05D004072 ORTHO05D005933 7.8e-112 408.7 638 52.2
SEGI_16447 Sequoiadendron giganteum HOM05D004072 ORTHO05D005933 8.3e-106 388.7 581 48.2
HPP92_000970 Vanilla planifolia HOM05D004072 ORTHO05D005933 1.9e-105 387.5 306 72.2
SMO308G0046 Selaginella moellendorffii HOM05D004072 ORTHO05D005933 2.4e-105 387.1 547 49.5
Pp3c17_7410 Physcomitrium patens HOM05D004072 ORTHO05D005933 2.1e-104 384.0 410 57.1
Glyma.09G084300 Glycine max HOM05D004072 ORTHO05D005933 1.1e-94 351.7 173 94.2
CARHR128800 Cardamine hirsuta HOM05D004072 ORTHO05D005933 4.0e-92 343.2 582 40.2
SMO271G0077 Selaginella moellendorffii HOM05D004072 ORTHO05D005933 6.9e-92 342.4 575 41.2
VMungo1309G2749 Vigna mungo HOM05D004072 ORTHO05D005933 2.9e-90 337.0 177 87.6
Pp3c14_11530 Physcomitrium patens HOM05D004072 ORTHO05D005933 1.5e-86 324.7 595 41.3
Hund21569 Selenicereus undatus HOM05D004072 ORTHO05D005933 9.6e-86 322.0 606 42.9
Mapoly0023s0068 Marchantia polymorpha HOM05D004072 ORTHO05D005933 4.8e-85 319.7 536 44.8
VMungo1309G0832 Vigna mungo HOM05D004072 ORTHO05D005933 8.1e-85 318.9 439 53.3
CAN.G660.43 Capsicum annuum HOM05D004072 ORTHO05D005933 8.5e-58 229.2 589 34.3
CBR_g51063 Chara braunii HOM05D004072 ORTHO05D005933 4.8e-53 213.4 325 36.3
Cpa.g.sc17.83 Carica papaya HOM05D004072 ORTHO05D005933 1.8e-44 184.9 130 62.3
CSS0006934 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 1.2e-35 155.6 116 59.5
Atru.chr10.903 Acer truncatum HOM05D004072 ORTHO05D021063 2.1e-24 118.2 219 42.9
CSS0009414 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 2.1e-24 118.2 61 90.2
Hma1.2p1_1600F.1_g293130 Hydrangea macrophylla HOM05D004072 ORTHO05D005933 1.4e-23 115.5 63 88.9
Ciclev10014084m.g Citrus clementina HOM05D004072 ORTHO05D005933 1.3e-10 72.4 41 75.6
Cpa.g.sc17.80 Carica papaya HOM05D004072 ORTHO05D021063 3.9e-10 70.9 289 31.5
Duzib248G0875 Durio zibethinus HOM05D000121 ORTHO05D000102 3.3e-09 67.8 44 75.0
CSS0023750 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D021063 6.1e-08 63.5 288 33.3
Actinidia36003 Actinidia chinensis HOM05D004072 ORTHO05D021063 1.0e-07 62.8 91 49.5
Oeu025478.1 Olea europaea HOM05D002278 ORTHO05D007219 2.0e-06 58.5 157 29.9
CSS0034048 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D021063 5.8e-06 57.0 281 33.8


User provided reference genes

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