Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.15G187700 Glycine max HOM05D004909 ORTHO05D009316 0.0e+00 1515.0 753 100.0
EL10Ac7g16726 Beta vulgaris HOM05D004909 ORTHO05D009316 0.0e+00 1129.0 708 78.8
Actinidia34900 Actinidia chinensis HOM05D004909 ORTHO05D009316 2.2e-228 796.2 734 56.4
AUR62042355 Chenopodium quinoa HOM05D004909 ORTHO05D009316 8.1e-207 724.5 655 55.3
AUR62043789 Chenopodium quinoa HOM05D004909 ORTHO05D009316 8.1e-207 724.5 655 55.3
AUR62043900 Chenopodium quinoa HOM05D004909 ORTHO05D009316 8.1e-207 724.5 655 55.3
AUR62026823 Chenopodium quinoa HOM05D004909 ORTHO05D009316 9.3e-179 631.3 652 50.6
DCAR_032462 Daucus carota HOM05D004909 ORTHO05D009316 2.7e-178 629.8 774 45.1
THA.LOC109116692 Tarenaya hassleriana HOM05D004909 ORTHO05D009316 2.2e-167 593.6 472 61.7
SEGI_22240 Sequoiadendron giganteum HOM05D004909 ORTHO05D009316 2.6e-165 586.6 722 45.4
vmacro17405 Vaccinium macrocarpon HOM05D004909 ORTHO05D009316 3.2e-163 579.7 421 64.1
Sed0005050 Sechium edule HOM05D004909 ORTHO05D009316 3.1e-158 563.1 715 44.8
EL10Ac1g02201 Beta vulgaris HOM05D004909 ORTHO05D009316 1.7e-156 557.4 758 42.2
SHI35584 Sapria himalayana HOM05D004909 ORTHO05D009316 1.3e-151 541.2 537 52.5
Sed0007601 Sechium edule HOM05D004909 ORTHO05D009316 7.2e-147 525.4 600 46.2
Aqoxy2G02244 Aquilegia oxysepala HOM05D004909 ORTHO05D009316 8.0e-146 521.9 720 41.8
Aqoxy3G01127 Aquilegia oxysepala HOM05D004909 ORTHO05D009316 8.0e-146 521.9 720 41.8
SHI34934 Sapria himalayana HOM05D004909 ORTHO05D009316 1.5e-139 501.1 566 47.5
SHI44822 Sapria himalayana HOM05D004909 ORTHO05D009316 5.4e-134 482.6 352 64.2
AUR62042351 Chenopodium quinoa HOM05D004909 ORTHO05D009316 4.5e-133 479.6 685 41.0
SHI44820 Sapria himalayana HOM05D004909 ORTHO05D009316 1.1e-131 474.9 378 60.8
Lalb_Chr11g0070061 Lupinus albus HOM05D004909 ORTHO05D009316 2.5e-131 473.8 396 56.8
Lj2A1227T106 Lonicera japonica HOM05D004909 ORTHO05D009316 8.6e-124 448.7 416 52.2
HPP92_026900 Vanilla planifolia HOM05D004909 ORTHO05D009316 5.7e-120 436.0 444 51.1
Lalb_Chr00c21g0405621 Lupinus albus HOM05D004909 ORTHO05D009316 1.2e-117 428.3 361 55.7
PGR044G0991 Punica granatum HOM05D004909 ORTHO05D009316 1.6e-114 417.9 342 56.7
Sc13g0007740 Simmondsia chinensis HOM05D004909 ORTHO05D009316 4.3e-107 393.3 455 49.7
AUR62037530 Chenopodium quinoa HOM05D004909 ORTHO05D009316 5.6e-107 392.9 404 53.2
Sed0025836 Sechium edule HOM05D004909 ORTHO05D009316 2.1e-106 391.0 320 57.5
Cc00_g01790 Coffea canephora HOM05D004909 ORTHO05D009316 4.3e-99 366.7 257 66.5
EL10Ac1g01434 Beta vulgaris HOM05D004909 ORTHO05D009316 1.4e-94 351.7 292 58.9
AUR62043915 Chenopodium quinoa HOM05D004909 ORTHO05D009316 2.5e-91 340.9 317 56.2
AUR62029835 Chenopodium quinoa HOM05D004909 ORTHO05D009316 2.0e-88 331.3 252 65.1
CsaV3_UNG209050 Cucumis sativus L. HOM05D004909 ORTHO05D009316 3.2e-86 323.9 337 49.0
TWI14G0838 Tripterygium wilfordii HOM05D004909 ORTHO05D009316 3.0e-84 317.4 405 47.7
CAN.G1542.8 Capsicum annuum HOM05D004909 ORTHO05D009316 1.1e-65 255.8 255 50.2
Sc15g0003200 Simmondsia chinensis HOM05D004909 ORTHO05D009316 1.4e-62 245.4 172 65.1
Lj2P1224T90 Lonicera japonica HOM05D004909 ORTHO05D009316 1.6e-61 241.9 205 54.1
RcHm_v2.0_Chr6g0256721 Rosa chinensis HOM05D006604 ORTHO05D007974 6.0e-61 240.0 389 37.3
Nitab4.5_0004300g0260 Nicotiana tabacum HOM05D004909 ORTHO05D009316 1.6e-58 231.9 320 39.4
CAN.G505.15 Capsicum annuum HOM05D004909 ORTHO05D009316 2.0e-56 224.9 373 34.6
arahy.Tifrunner.gnm1.ann1.HS2KB4 Arachis hypogaea HOM05D004909 ORTHO05D009316 7.6e-56 223.0 371 39.1
EL10Ac7g17805 Beta vulgaris HOM05D004909 ORTHO05D009316 1.1e-51 209.1 169 60.9
Peaxi162Scf00651g00626 Petunia axillaris HOM05D004909 ORTHO05D009316 7.4e-51 206.5 518 29.2
AUR62042356 Chenopodium quinoa HOM05D004909 ORTHO05D009316 4.8e-50 203.8 420 33.6
Nitab4.5_0010033g0040 Nicotiana tabacum HOM05D004909 ORTHO05D009316 5.5e-46 190.3 299 39.5
AUR62038224 Chenopodium quinoa HOM05D000613 ORTHO05D000446 1.8e-44 185.3 125 67.2
Nitab4.5_0001681g0080 Nicotiana tabacum HOM05D004909 ORTHO05D009316 6.7e-44 183.3 166 52.4
Nitab4.5_0000580g0100 Nicotiana tabacum HOM05D004909 ORTHO05D009316 9.7e-43 179.5 174 51.1
CAN.G505.10 Capsicum annuum HOM05D004909 ORTHO05D009316 6.5e-39 166.8 175 48.6
Peaxi162Scf00456g00034 Petunia axillaris HOM05D004909 ORTHO05D009316 6.5e-39 166.8 147 55.1
Oeu050987.1 Olea europaea HOM05D004909 ORTHO05D009625 7.2e-38 163.3 339 34.2
Oeu050988.1 Olea europaea HOM05D004909 ORTHO05D009625 1.8e-36 158.7 392 32.1
EL10Ac6g15711 Beta vulgaris HOM05D004909 ORTHO05D009316 2.0e-35 155.2 113 59.3
CAN.G14.29 Capsicum annuum HOM05D004909 ORTHO05D009316 9.7e-35 152.9 175 46.3
CAN.G7.24 Capsicum annuum HOM05D004909 ORTHO05D009316 4.5e-32 144.1 136 50.7
AUR62043790 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.7e-31 142.1 101 60.4
AUR62043901 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.7e-31 142.1 101 60.4
Peaxi162Scf00625g00037 Petunia axillaris HOM05D002660 ORTHO05D003902 5.0e-31 140.6 518 28.6
Solyc03g013470.1 Solanum lycopersicum HOM05D004909 ORTHO05D009316 2.7e-29 134.8 363 27.8
AUR62043914 Chenopodium quinoa HOM05D000533 ORTHO05D001069 1.5e-27 129.0 252 35.3
COL.COLO4_04384 Corchorus olitorius HOM05D004909 ORTHO05D009316 1.8e-25 122.1 84 64.3
AUR62030242 Chenopodium quinoa HOM05D004909 ORTHO05D009316 2.4e-25 121.7 90 66.7
CAN.G505.9 Capsicum annuum HOM05D004909 ORTHO05D009316 3.1e-25 121.3 149 44.3
EL10Ac7g16568 Beta vulgaris HOM05D004909 ORTHO05D009316 7.0e-25 120.2 127 52.0
Sc02g0004080 Simmondsia chinensis HOM05D004909 ORTHO05D009316 7.0e-25 120.2 94 59.6
EL10As18g24157 Beta vulgaris HOM05D004909 ORTHO05D009316 2.7e-24 118.2 96 59.4
Nitab4.5_0001526g0140 Nicotiana tabacum HOM05D004909 ORTHO05D009316 3.5e-24 117.9 206 35.9
Rhsim01G0136300 Rhododendron simsii HOM05D004909 ORTHO05D009316 3.2e-22 111.3 111 53.2
EL10Ac1g01432 Beta vulgaris HOM05D004909 ORTHO05D009316 2.1e-21 108.6 159 37.7
AUR62022155 Chenopodium quinoa HOM05D005031 ORTHO05D006098 3.6e-21 107.8 181 34.8
CAN.G100.53 Capsicum annuum HOM05D004909 ORTHO05D009316 8.0e-21 106.7 162 40.1
arahy.Tifrunner.gnm1.ann1.MAXI5J Arachis hypogaea HOM05D004909 ORTHO05D009316 1.2e-19 102.8 103 50.5
SGA_v2.0_scaffold328G48796 Striga asiatica HOM05D004909 ORTHO05D009316 7.5e-19 100.1 54 77.8
Lalb_Chr00c21g0405611 Lupinus albus HOM05D004909 ORTHO05D009316 4.8e-18 97.4 68 70.6
arahy.Tifrunner.gnm1.ann1.0IJH8U Arachis hypogaea HOM05D012997 ORTHO05D014434 1.6e-16 92.4 62 71.0
CAN.G733.11 Capsicum annuum HOM05D004909 ORTHO05D009316 2.3e-15 88.6 101 42.6
Nitab4.5_0000351g0260 Nicotiana tabacum HOM05D004909 ORTHO05D009316 3.8e-15 87.8 74 55.4
HPP92_021361 Vanilla planifolia HOM05D004909 ORTHO05D009316 1.9e-14 85.5 55 67.3
CAN.G1858.5 Capsicum annuum HOM05D004909 ORTHO05D009316 5.5e-14 84.0 273 28.6
Nitab4.5_0000081g0150 Nicotiana tabacum HOM05D004909 ORTHO05D009625 8.0e-13 80.1 125 39.2
AUR62043791 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.0e-12 79.7 113 43.4
AUR62043902 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.0e-12 79.7 113 43.4
Peaxi162Scf00456g00033 Petunia axillaris HOM05D004909 ORTHO05D009316 5.2e-12 77.4 102 47.1
Hma1.2p1_0003F.1_g003590 Hydrangea macrophylla HOM05D004909 ORTHO05D009316 5.7e-11 73.9 158 36.7
Oeu013314.1 Olea europaea HOM05D000129 ORTHO05D000144 9.8e-11 73.2 55 56.4
Peaxi162Scf00625g00034 Petunia axillaris HOM05D002660 ORTHO05D003902 4.9e-10 70.9 133 34.6
CAN.G26.10 Capsicum annuum HOM05D004909 ORTHO05D009316 2.7e-08 65.1 52 59.6
EL10Ac1g01431 Beta vulgaris HOM05D004909 ORTHO05D009316 3.5e-08 64.7 136 35.3
Nitab4.5_0000580g0140 Nicotiana tabacum HOM05D004909 ORTHO05D009316 2.9e-07 61.6 86 44.2
Ah.10g028110 Amaranthus hybridus HOM05D004909 ORTHO05D009316 3.3e-06 58.2 95 41.1
Sopen07g004960 Solanum pennellii HOM05D000890 ORTHO05D000697 3.3e-06 58.2 52 55.8
Ah.07g204880 Amaranthus hybridus HOM05D004909 ORTHO05D009316 9.5e-06 56.6 38 71.1


User provided reference genes

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