Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.15G140101 Glycine max HOM05D000876 ORTHO05D000285 9.1e-57 223.4 117 100.0
Glyma.02G166900 Glycine max HOM05D000876 ORTHO05D000285 3.1e-49 198.4 117 88.9
Glyma.09G090801 Glycine max HOM05D000876 ORTHO05D000285 4.1e-49 198.0 117 89.7
Glyma.18G110601 Glycine max HOM05D000876 ORTHO05D000285 2.0e-48 195.7 117 88.9
Glyma.18G094800 Glycine max HOM05D000876 ORTHO05D000285 7.7e-48 193.7 117 86.3
Glyma.19G101700 Glycine max HOM05D000876 ORTHO05D000285 6.5e-47 190.7 117 86.3
Lj1g0007225 Lotus japonicus HOM05D000034 ORTHO05D000037 2.2e-26 122.5 105 60.0
Lj2g0028060 Lotus japonicus HOM05D000034 ORTHO05D000037 2.2e-26 122.5 105 60.0
Lj1g0001620 Lotus japonicus HOM05D000034 ORTHO05D000037 4.9e-26 121.3 105 60.0
Lj2g0008174 Lotus japonicus HOM05D000876 ORTHO05D000285 8.3e-26 120.6 104 59.6
Glyma.08G267500 Glycine max HOM05D000876 ORTHO05D000285 2.0e-24 115.9 67 91.0
arahy.Tifrunner.gnm1.ann1.7Y6611 Arachis hypogaea HOM05D000034 ORTHO05D000037 2.0e-11 72.8 96 44.8
arahy.Tifrunner.gnm1.ann1.GL17HH Arachis hypogaea HOM05D000034 ORTHO05D000037 2.0e-11 72.8 103 42.7
arahy.Tifrunner.gnm1.ann1.R6BV2D Arachis hypogaea HOM05D000876 ORTHO05D000285 4.4e-11 71.6 99 43.4
arahy.Tifrunner.gnm1.ann1.Z2QP4M Arachis hypogaea HOM05D000034 ORTHO05D000037 4.4e-11 71.6 99 43.4
arahy.Tifrunner.gnm1.ann1.L4SQ9F Arachis hypogaea HOM05D000034 ORTHO05D000037 7.5e-11 70.9 99 43.4
arahy.Tifrunner.gnm1.ann1.AG0B9Q Arachis hypogaea HOM05D000034 ORTHO05D000285 9.9e-11 70.5 103 41.7
arahy.Tifrunner.gnm1.ann1.PEG6DJ Arachis hypogaea HOM05D000034 ORTHO05D000037 9.9e-11 70.5 99 42.4
Glyma.04G129400 Glycine max HOM05D000876 ORTHO05D000285 1.7e-10 69.7 41 87.8
arahy.Tifrunner.gnm1.ann1.01IP25 Arachis hypogaea HOM05D000034 ORTHO05D000037 2.9e-10 68.9 99 41.4
arahy.Tifrunner.gnm1.ann1.2911W9 Arachis hypogaea HOM05D000876 ORTHO05D000285 3.7e-10 68.6 99 42.4
arahy.Tifrunner.gnm1.ann1.GG5U8X Arachis hypogaea HOM05D000876 ORTHO05D000285 3.7e-10 68.6 99 42.4
arahy.Tifrunner.gnm1.ann1.M8N6J9 Arachis hypogaea HOM05D000876 ORTHO05D000285 3.7e-10 68.6 103 41.7
arahy.Tifrunner.gnm1.ann1.X5RLQI Arachis hypogaea HOM05D000034 ORTHO05D000285 1.1e-09 67.0 96 42.7
arahy.Tifrunner.gnm1.ann1.UKR2WH Arachis hypogaea HOM05D000034 ORTHO05D000037 5.4e-09 64.7 96 41.7
arahy.Tifrunner.gnm1.ann1.2F6TQ9 Arachis hypogaea HOM05D000876 ORTHO05D000285 9.2e-09 63.9 102 40.2
arahy.Tifrunner.gnm1.ann1.I2TZJW Arachis hypogaea HOM05D000876 ORTHO05D000285 9.2e-09 63.9 102 40.2
arahy.Tifrunner.gnm1.ann1.41KYN2 Arachis hypogaea HOM05D000876 ORTHO05D000285 1.7e-07 59.7 53 52.8
Lj1g0019277 Lotus japonicus HOM05D000876 ORTHO05D000285 1.7e-07 59.7 106 35.8
Hund26462 Selenicereus undatus HOM05D000876 ORTHO05D002662 3.0e-07 58.9 113 34.5
Hund23719 Selenicereus undatus HOM05D000876 ORTHO05D000285 3.9e-07 58.5 122 31.1
Hund08681 Selenicereus undatus HOM05D000876 ORTHO05D000285 5.1e-07 58.2 122 30.3
CANSAT56G2973 Cannabis sativa HOM05D000876 ORTHO05D000285 6.6e-07 57.8 125 35.2
arahy.Tifrunner.gnm1.ann1.VI2TS7 Arachis hypogaea HOM05D000034 ORTHO05D000037 8.6e-07 57.4 53 50.9
CANSAT01G0041 Cannabis sativa HOM05D000876 ORTHO05D000285 1.1e-06 57.0 125 34.4
QL05p031161 Quercus lobata HOM05D000034 ORTHO05D000037 1.1e-06 57.0 98 34.7
Sed0005915 Sechium edule HOM05D000876 ORTHO05D000285 1.9e-06 56.2 112 32.1
CsaV3_5G004940 Cucumis sativus L. HOM05D000876 ORTHO05D000285 2.5e-06 55.8 89 33.7
QL08p029247 Quercus lobata HOM05D013302 ORTHO05D015047 3.3e-06 55.5 122 29.5
CANSAT78G1247 Cannabis sativa HOM05D000876 ORTHO05D000285 4.3e-06 55.1 125 34.4
QL04p079613 Quercus lobata HOM05D000876 ORTHO05D000285 4.3e-06 55.1 121 30.6
arahy.Tifrunner.gnm1.ann1.ZGB0RI Arachis hypogaea HOM05D000034 ORTHO05D000037 5.6e-06 54.7 103 36.9
CANSAT54G1231 Cannabis sativa HOM05D000876 ORTHO05D000285 7.3e-06 54.3 113 34.5
Atru.chr2.1367 Acer truncatum HOM05D000876 ORTHO05D000285 9.5e-06 53.9 115 31.3


User provided reference genes

Program Settings