Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.15G090500 Glycine max HOM05D007799 ORTHO05D009854 5.3e-139 497.7 247 100.0
Glyma.13G221700 Glycine max HOM05D007799 ORTHO05D009854 6.7e-134 480.7 247 96.8
VMungo0540G2150 Vigna mungo HOM05D007799 ORTHO05D009854 3.7e-124 448.4 248 89.5
Lj6g0006831 Lotus japonicus HOM05D007799 ORTHO05D009854 3.4e-114 415.2 247 81.8
Medtr2g018670 Medicago truncatula HOM05D007799 ORTHO05D009854 1.4e-112 409.8 248 82.3
Ca_00511_v3 Cicer arietinum L. HOM05D007799 ORTHO05D009854 1.4e-110 403.3 242 80.6
Lalb_Chr20g0117681 Lupinus albus HOM05D007799 ORTHO05D009854 2.0e-109 399.4 236 83.1
TPR.G26257 Trifolium pratense HOM05D007799 ORTHO05D009854 3.3e-109 398.7 240 82.1
Psat1g192080 Pisum sativum HOM05D007799 ORTHO05D009854 1.4e-107 393.3 248 79.4
Lalb_Chr15g0086631 Lupinus albus HOM05D007799 ORTHO05D009854 7.2e-104 380.9 252 76.6
Glyma.05G143400 Glycine max HOM05D007799 ORTHO05D009854 8.0e-103 377.5 248 75.0
Glyma.08G099800 Glycine max HOM05D007799 ORTHO05D009854 4.8e-100 368.2 248 73.0
arahy.Tifrunner.gnm1.ann1.NZ6SRJ Arachis hypogaea HOM05D007799 ORTHO05D009854 6.5e-97 357.8 243 72.0
arahy.Tifrunner.gnm1.ann1.80ML42 Arachis hypogaea HOM05D007799 ORTHO05D009854 1.5e-96 356.7 243 71.6
arahy.Tifrunner.gnm1.ann1.GW4I6G Arachis hypogaea HOM05D002205 ORTHO05D004847 2.0e-93 346.3 248 70.6
Phvul.002G177900 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 4.4e-93 345.1 237 70.0
arahy.Tifrunner.gnm1.ann1.W0WEAA Arachis hypogaea HOM05D007799 ORTHO05D009854 7.5e-93 344.4 248 69.8
Phvul.006G168136 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 9.8e-93 344.0 194 88.7
VMungo0251G0945 Vigna mungo HOM05D007799 ORTHO05D009854 3.7e-92 342.0 237 69.6
Lalb_Chr13g0294011 Lupinus albus HOM05D007799 ORTHO05D009854 1.1e-91 340.5 247 68.0
Medtr8g079475 Medicago truncatula HOM05D007799 ORTHO05D009854 5.4e-91 338.2 249 66.7
QL05p055084 Quercus lobata HOM05D007799 ORTHO05D009854 2.2e-89 332.8 248 63.7
Manes.15G125000 Manihot esculenta HOM05D007799 ORTHO05D009854 1.5e-88 330.1 244 64.8
Duzib192G0648 Durio zibethinus HOM05D007799 ORTHO05D009854 3.2e-88 328.9 244 63.1
CiPaw.10G088800 Carya illinoinensis HOM05D007799 ORTHO05D009854 7.5e-85 317.8 251 61.0
Thecc.06G144300 Theobroma cacao HOM05D007799 ORTHO05D009854 9.8e-85 317.4 244 60.2
Cfa000897 Carpinus fangiana HOM05D007799 ORTHO05D009854 1.7e-84 316.6 244 60.2
Eucgr.D00266 Eucalyptus grandis HOM05D007799 ORTHO05D009854 1.8e-83 313.2 248 62.1
CiPaw.09G119600 Carya illinoinensis HOM05D007799 ORTHO05D009854 4.1e-83 312.0 250 61.2
Duzib235G1165 Durio zibethinus HOM05D007799 ORTHO05D009854 9.1e-83 310.8 237 62.0
Prupe.4G085700 Prunus persica HOM05D007799 ORTHO05D009854 1.6e-82 310.1 249 60.6
MD10G1258100 Malus domestica HOM05D007799 ORTHO05D009854 5.9e-82 308.1 248 59.7
Atru.chr10.1081 Acer truncatum HOM05D007799 ORTHO05D009854 5.0e-81 305.1 215 65.6
COL.COLO4_31009 Corchorus olitorius HOM05D007799 ORTHO05D009854 6.6e-81 304.7 220 65.5
MD05G1279400 Malus domestica HOM05D007799 ORTHO05D009854 6.6e-81 304.7 248 60.1
RcHm_v2.0_Chr5g0014941 Rosa chinensis HOM05D007799 ORTHO05D009854 8.0e-79 297.7 246 57.3
Ciclev10016395m.g Citrus clementina HOM05D007799 ORTHO05D009854 1.4e-78 297.0 247 59.1
FvH4_3g05030 Fragaria vesca HOM05D007799 ORTHO05D009854 1.8e-75 286.6 250 55.6
FAN16G3425 Fragaria x ananassa HOM05D007799 ORTHO05D009854 4.1e-75 285.4 250 54.8
FAN11G0145 Fragaria x ananassa HOM05D007799 ORTHO05D009854 5.4e-75 285.0 250 54.8
FAN25G3832 Fragaria x ananassa HOM05D007799 ORTHO05D009854 7.0e-75 284.6 250 55.2
CANSAT35G1982 Cannabis sativa HOM05D007799 ORTHO05D009854 9.2e-75 284.3 253 56.1
PGR083G2472 Punica granatum HOM05D007799 ORTHO05D009854 9.2e-75 284.3 257 55.6
Oeu032721.1 Olea europaea HOM05D007799 ORTHO05D009854 2.0e-74 283.1 220 61.4
FAN21G3556 Fragaria x ananassa HOM05D007799 ORTHO05D009854 7.8e-74 281.2 250 54.8
Cc00_g02020 Coffea canephora HOM05D007799 ORTHO05D009854 2.3e-73 279.6 248 55.2
Gohir.A06G196000 Gossypium hirsutum HOM05D007799 ORTHO05D009854 3.9e-73 278.9 215 61.4
PGSC0003DMG400002292 Solanum tuberosum HOM05D007799 ORTHO05D009854 3.9e-73 278.9 235 55.7
Haze_05684 Corylus avellana HOM05D007799 ORTHO05D009854 5.0e-73 278.5 244 55.7
Gorai.010G237400 Gossypium raimondii HOM05D007799 ORTHO05D009854 8.6e-73 277.7 215 60.9
Potri.011G081701 Populus trichocarpa HOM05D007799 ORTHO05D009854 1.1e-72 277.3 223 60.1
CSS0034958 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 1.5e-72 276.9 224 58.5
Peaxi162Scf00045g02414 Petunia axillaris HOM05D007799 ORTHO05D009854 3.3e-72 275.8 235 58.7
MBI18_g11218_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 4.3e-72 275.4 238 52.1
Rhsim13G0117700 Rhododendron simsii HOM05D007799 ORTHO05D009854 4.3e-72 275.4 221 58.4
Nitab4.5_0005655g0010 Nicotiana tabacum HOM05D007799 ORTHO05D009854 3.6e-71 272.3 236 56.4
CSS0035706 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 4.7e-71 271.9 224 57.6
Gohir.D06G203500 Gossypium hirsutum HOM05D007799 ORTHO05D009854 8.0e-71 271.2 210 60.5
MBI02_g12199_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 2.3e-70 269.6 233 52.4
Migut.K01168 Erythranthe guttata HOM05D007799 ORTHO05D009854 9.8e-69 264.2 208 58.7
GSVIVG01021549001 Vitis vinifera HOM05D007799 ORTHO05D009854 2.4e-67 259.6 223 55.6
Oeu031191.1 Olea europaea HOM05D007799 ORTHO05D009854 4.1e-67 258.8 217 58.5
SalBow8G4130 Salvia bowleyana HOM05D007799 ORTHO05D009854 9.2e-67 257.7 228 53.9
TPR.G9572 Trifolium pratense HOM05D007799 ORTHO05D009854 1.2e-66 257.3 187 67.9
DCAR_003890 Daucus carota HOM05D007799 ORTHO05D009854 2.1e-63 246.5 252 49.6
Nitab4.5_0000315g0030 Nicotiana tabacum HOM05D007799 ORTHO05D009854 3.4e-61 239.2 236 52.1
Nn3g20329 Nelumbo nucifera HOM05D007799 ORTHO05D009854 5.8e-61 238.4 230 52.2
ClCG03G006490 Citrullus lanatus HOM05D007799 ORTHO05D009854 1.7e-60 236.9 236 50.4
CsaV3_1G036880 Cucumis sativus L. HOM05D007799 ORTHO05D009854 2.2e-60 236.5 237 48.1
Lsat_1_v5_gn_7_27461 Lactuca sativa HOM05D007799 ORTHO05D009854 3.7e-60 235.7 239 51.0
Actinidia32344 Actinidia chinensis HOM05D007799 ORTHO05D009854 1.1e-59 234.2 221 52.0
HanXRQChr15g0482011 Helianthus annuus HOM05D007799 ORTHO05D009854 1.3e-57 227.3 236 47.5
HPP92_026553 Vanilla planifolia HOM05D007799 ORTHO05D009854 1.7e-57 226.9 229 45.0
vmacro03431 Vaccinium macrocarpon HOM05D007799 ORTHO05D009854 5.6e-56 221.9 243 48.6
Sed0012400 Sechium edule HOM05D007799 ORTHO05D009854 1.2e-55 220.7 212 51.9
HanXRQChr04g0116571 Helianthus annuus HOM05D007799 ORTHO05D009854 6.2e-55 218.4 236 47.0
Dinv32213 Davidia involucrata HOM05D007799 ORTHO05D009854 1.1e-54 217.6 183 61.2
ECA236G2997 Erigeron canadensis HOM05D007799 ORTHO05D009854 6.8e-54 214.9 225 48.4
TAR624G0778 Trochodendron aralioides HOM05D007799 ORTHO05D009854 4.4e-53 212.2 157 65.0
CDE12G0863 Ceratophyllum demersum HOM05D007799 ORTHO05D009854 1.1e-51 207.6 221 46.6
HPP92_028169 Vanilla planifolia HOM05D007799 ORTHO05D009854 3.2e-51 206.1 235 42.1
ATR1098G006 Amborella trichopoda HOM05D007799 ORTHO05D009854 8.6e-49 198.0 238 40.3
DCAR_007872 Daucus carota HOM05D007799 ORTHO05D009854 2.8e-47 193.0 258 42.6
Sopen08g008720 Solanum pennellii HOM05D007799 ORTHO05D009854 4.9e-36 155.6 153 49.0
MELO3C035703.2 Cucumis melo HOM05D007799 ORTHO05D009854 1.6e-34 150.6 172 44.2
Solyc08g023510.3 Solanum lycopersicum HOM05D007799 ORTHO05D009854 2.3e-33 146.7 146 47.9
Lj1C1169G11 Lonicera japonica HOM05D002205 ORTHO05D004847 1.2e-26 124.4 96 59.4
TPR.G18987 Trifolium pratense HOM05D007799 ORTHO05D009854 6.0e-26 122.1 80 67.5
HPP92_026526 Vanilla planifolia HOM05D007799 ORTHO05D009854 7.6e-21 105.1 103 46.6
SEGI_29226 Sequoiadendron giganteum HOM05D007799 ORTHO05D009854 6.5e-20 102.1 178 31.5
SEGI_07596 Sequoiadendron giganteum HOM05D014396 ORTHO05D017117 1.9e-08 63.9 206 23.3
SEGI_23668 Sequoiadendron giganteum HOM05D014396 ORTHO05D017117 2.4e-06 57.0 214 23.8


User provided reference genes

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