Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.15G076500 Glycine max HOM05D003630 ORTHO05D004151 3.4e-43 178.3 118 100.0
Glyma.13G237000 Glycine max HOM05D003630 ORTHO05D004151 2.4e-41 172.2 118 89.0
VMungo0540G1118 Vigna mungo HOM05D003630 ORTHO05D004151 9.2e-41 170.2 118 85.6
Phvul.006G183600 Phaseolus vulgaris HOM05D003630 ORTHO05D004151 1.6e-40 169.5 118 83.9
Lj6g0013661 Lotus japonicus HOM05D003630 ORTHO05D004151 1.1e-36 156.8 118 75.4
arahy.Tifrunner.gnm1.ann1.H8XLFU Arachis hypogaea HOM05D003630 ORTHO05D004151 8.9e-36 153.7 118 74.6
arahy.Tifrunner.gnm1.ann1.S1G93A Arachis hypogaea HOM05D003630 ORTHO05D004151 8.9e-36 153.7 118 74.6
Lalb_Chr15g0089711 Lupinus albus HOM05D003630 ORTHO05D004151 5.8e-35 151.0 114 76.3
arahy.Tifrunner.gnm1.ann1.Q5B35H Arachis hypogaea HOM05D003630 ORTHO05D004151 4.1e-33 144.8 122 67.2
Ca_00350_v3 Cicer arietinum L. HOM05D003630 ORTHO05D004151 1.2e-32 143.3 116 71.6
CiPaw.09G062300 Carya illinoinensis HOM05D003630 ORTHO05D004151 2.1e-32 142.5 118 66.1
Lalb_Chr18g0059451 Lupinus albus HOM05D003630 ORTHO05D004151 2.1e-32 142.5 117 74.4
Medtr2g014240 Medicago truncatula HOM05D003630 ORTHO05D004151 2.7e-32 142.1 116 70.7
CiPaw.10G051200 Carya illinoinensis HOM05D003630 ORTHO05D004151 1.7e-31 139.4 122 66.4
Cpa.g.sc373.3 Carica papaya HOM05D003630 ORTHO05D004151 2.3e-31 139.0 120 67.5
TPR.G16501 Trifolium pratense HOM05D003630 ORTHO05D004151 2.3e-31 139.0 116 69.0
arahy.Tifrunner.gnm1.ann1.RY2Y1Z Arachis hypogaea HOM05D003630 ORTHO05D004151 3.0e-31 138.7 122 65.6
Prupe.4G050800 Prunus persica HOM05D003630 ORTHO05D004151 3.0e-31 138.7 118 67.8
Gohir.A06G129700 Gossypium hirsutum HOM05D003630 ORTHO05D004151 8.6e-31 137.1 119 69.7
Gohir.D06G133900 Gossypium hirsutum HOM05D003630 ORTHO05D004151 8.6e-31 137.1 119 69.7
Gohir.A05G159800 Gossypium hirsutum HOM05D003630 ORTHO05D004151 1.9e-30 136.0 120 59.2
Sed0024812 Sechium edule HOM05D003630 ORTHO05D004151 1.9e-30 136.0 118 64.4
Nn1g04163 Nelumbo nucifera HOM05D003630 ORTHO05D004151 2.5e-30 135.6 120 66.7
Sed0017838 Sechium edule HOM05D003630 ORTHO05D004151 2.5e-30 135.6 122 70.5
ATR0752G193 Amborella trichopoda HOM05D003630 ORTHO05D004151 3.3e-30 135.2 122 63.9
RcHm_v2.0_Chr5g0008921 Rosa chinensis HOM05D003630 ORTHO05D004151 4.3e-30 134.8 118 68.6
ClCG01G023140 Citrullus lanatus HOM05D003630 ORTHO05D004151 5.6e-30 134.4 122 68.0
Gohir.D05G162500 Gossypium hirsutum HOM05D003630 ORTHO05D004151 5.6e-30 134.4 120 58.3
TWI38G1513 Tripterygium wilfordii HOM05D003630 ORTHO05D004151 5.6e-30 134.4 119 68.9
Duzib160G0312 Durio zibethinus HOM05D003630 ORTHO05D004151 7.3e-30 134.0 116 65.5
Actinidia07592 Actinidia chinensis HOM05D003630 ORTHO05D004151 9.6e-30 133.7 121 62.8
Lalb_Chr09g0327781 Lupinus albus HOM05D003630 ORTHO05D004151 9.6e-30 133.7 118 60.2
Manes.17G047900 Manihot esculenta HOM05D003630 ORTHO05D004151 1.2e-29 133.3 117 67.5
PGR042G3375 Punica granatum HOM05D003630 ORTHO05D004151 2.1e-29 132.5 118 69.5
CDE11G0243 Ceratophyllum demersum HOM05D003630 ORTHO05D004151 2.8e-29 132.1 118 61.0
Cc02_g13650 Coffea canephora HOM05D003630 ORTHO05D004151 6.2e-29 131.0 126 63.5
CsaV3_6G050280 Cucumis sativus L. HOM05D003630 ORTHO05D004151 6.2e-29 131.0 121 67.8
Hma1.2p1_0208F.1_g088370 Hydrangea macrophylla HOM05D003630 ORTHO05D004151 1.1e-28 130.2 126 61.1
GSVIVG01021092001 Vitis vinifera HOM05D003630 ORTHO05D004151 2.4e-28 129.0 121 70.2
Nitab4.5_0000516g0130 Nicotiana tabacum HOM05D003630 ORTHO05D004151 3.1e-28 128.6 125 64.8
QL05p041782 Quercus lobata HOM05D003630 ORTHO05D004151 4.0e-28 128.3 120 63.3
CANSAT35G1140 Cannabis sativa HOM05D003630 ORTHO05D004151 8.9e-28 127.1 126 60.3
MBI02_g32444_MAGBIO Magnolia biondii HOM05D003630 ORTHO05D004151 8.9e-28 127.1 126 54.0
FvH4_3g08830 Fragaria vesca HOM05D003630 ORTHO05D004151 1.2e-27 126.7 117 67.5
FAN11G3953 Fragaria x ananassa HOM05D003630 ORTHO05D004151 1.2e-27 126.7 117 67.5
PGR004G0839 Punica granatum HOM05D003630 ORTHO05D004151 1.2e-27 126.7 125 60.0
TAR626G1897 Trochodendron aralioides HOM05D003630 ORTHO05D004151 1.5e-27 126.3 120 60.8
CSS0035295 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 2.0e-27 125.9 119 65.5
FAN16G2355 Fragaria x ananassa HOM05D003630 ORTHO05D004151 2.6e-27 125.6 117 64.1
FAN21G0750 Fragaria x ananassa HOM05D003630 ORTHO05D004151 2.6e-27 125.6 117 67.5
FAN25G0655 Fragaria x ananassa HOM05D003630 ORTHO05D004151 2.6e-27 125.6 117 64.1
Carub.0001s2678 Capsella rubella HOM05D003630 ORTHO05D004151 3.4e-27 125.2 123 60.2
Dinv17335 Davidia involucrata HOM05D003630 ORTHO05D004151 3.4e-27 125.2 122 59.8
Nitab4.5_0003487g0100 Nicotiana tabacum HOM05D003630 ORTHO05D004151 7.6e-27 124.0 126 58.7
ECA236G4733 Erigeron canadensis HOM05D003630 ORTHO05D004151 1.3e-26 123.2 120 59.2
Migut.H01476 Erythranthe guttata HOM05D003630 ORTHO05D004151 1.3e-26 123.2 123 58.5
CDE05G2086 Ceratophyllum demersum HOM05D003630 ORTHO05D004151 1.7e-26 122.9 118 55.9
Oeu056100.2 Olea europaea HOM05D003630 ORTHO05D004151 1.7e-26 122.9 120 60.0
TAR624G0603 Trochodendron aralioides HOM05D003630 ORTHO05D004151 2.2e-26 122.5 122 52.5
Sed0001316 Sechium edule HOM05D003630 ORTHO05D004151 2.9e-26 122.1 116 52.6
Solyc03g006360.3 Solanum lycopersicum HOM05D003630 ORTHO05D004151 3.8e-26 121.7 132 60.6
THA.LOC104812301 Tarenaya hassleriana HOM05D003630 ORTHO05D004151 3.8e-26 121.7 119 63.0
ClCG03G008090 Citrullus lanatus HOM05D003630 ORTHO05D004151 4.9e-26 121.3 116 55.2
Oeu012144.1 Olea europaea HOM05D003630 ORTHO05D004151 4.9e-26 121.3 123 61.0
SalBow8G2511 Salvia bowleyana HOM05D003630 ORTHO05D004151 4.9e-26 121.3 118 51.7
Thecc.06G183500 Theobroma cacao HOM05D003630 ORTHO05D004151 4.9e-26 121.3 108 71.3
Ah.09g237490 Amaranthus hybridus HOM05D003630 ORTHO05D004151 6.4e-26 120.9 122 61.5
BcaB07g32449 Brassica carinata HOM05D003630 ORTHO05D004151 6.4e-26 120.9 119 56.3
CiPaw.04G030300 Carya illinoinensis HOM05D003630 ORTHO05D004151 8.4e-26 120.6 106 63.2
CsaV3_1G012460 Cucumis sativus L. HOM05D003630 ORTHO05D004151 8.4e-26 120.6 116 56.0
DCAR_003387 Daucus carota HOM05D003630 ORTHO05D004151 8.4e-26 120.6 117 60.7
Psat1g203680 Pisum sativum HOM05D003630 ORTHO05D004151 8.4e-26 120.6 104 68.3
Solyc02g077880.3 Solanum lycopersicum HOM05D003630 ORTHO05D004151 8.4e-26 120.6 119 55.5
Sopen02g022730 Solanum pennellii HOM05D003630 ORTHO05D004151 8.4e-26 120.6 119 55.5
unitig_749.g13657 Utricularia gibba HOM05D003630 ORTHO05D004151 1.1e-25 120.2 120 60.0
Aqoxy1G02347 Aquilegia oxysepala HOM05D003630 ORTHO05D004151 1.4e-25 119.8 117 56.4
Thhalv10009086m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 1.4e-25 119.8 124 58.1
BcaC05g26841 Brassica carinata HOM05D003630 ORTHO05D004151 1.9e-25 119.4 119 54.6
PGSC0003DMG400012826 Solanum tuberosum HOM05D003630 ORTHO05D004151 1.9e-25 119.4 131 56.5
MSTRG.15866 Avicennia marina HOM05D003630 ORTHO05D004151 2.4e-25 119.0 120 60.0
MELO3C002620.2 Cucumis melo HOM05D003630 ORTHO05D004151 4.2e-25 118.2 116 55.2
SGA_v2.0_scaffold100G29703 Striga asiatica HOM05D003630 ORTHO05D004151 5.4e-25 117.9 118 56.8
Peaxi162Scf01100g00009 Petunia axillaris HOM05D003630 ORTHO05D004151 7.1e-25 117.5 120 56.7
PGSC0003DMG400029732 Solanum tuberosum HOM05D003630 ORTHO05D004151 7.1e-25 117.5 119 51.3
MSTRG.13203 Avicennia marina HOM05D003630 ORTHO05D004151 9.3e-25 117.1 120 60.0
Gorai.010G155600 Gossypium raimondii HOM05D003630 ORTHO05D004151 9.3e-25 117.1 109 67.9
AUR62017046 Chenopodium quinoa HOM05D003630 ORTHO05D004151 1.2e-24 116.7 122 61.5
Cfa000510 Carpinus fangiana HOM05D003630 ORTHO05D004151 1.6e-24 116.3 110 70.0
AUR62014851 Chenopodium quinoa HOM05D003630 ORTHO05D004151 1.6e-24 116.3 122 62.3
HanXRQChr01g0003821 Helianthus annuus HOM05D003630 ORTHO05D004151 1.6e-24 116.3 118 62.7
Oeu029367.1 Olea europaea HOM05D003630 ORTHO05D004151 2.1e-24 115.9 119 56.3
vmacro15923 Vaccinium macrocarpon HOM05D003630 ORTHO05D004151 3.5e-24 115.2 124 49.2
Haze_06402 Corylus avellana HOM05D003630 ORTHO05D004151 4.6e-24 114.8 112 67.9
HPP92_018480 Vanilla planifolia HOM05D003630 ORTHO05D004151 4.6e-24 114.8 122 52.5
HPP92_018482 Vanilla planifolia HOM05D003630 ORTHO05D004151 4.6e-24 114.8 122 52.5
Os11g0671000 Oryza sativa ssp. japonica HOM05D003630 ORTHO05D004151 7.8e-24 114.0 126 59.5
Migut.M01120 Erythranthe guttata HOM05D003630 ORTHO05D004151 1.0e-23 113.6 124 48.4
PSO541G4117 Papaver somniferum HOM05D003630 ORTHO05D004151 1.7e-23 112.8 121 54.5
CSS0033873 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 3.9e-23 111.7 106 63.2
MELO3C007269.2 Cucumis melo HOM05D003630 ORTHO05D004151 3.9e-23 111.7 109 66.1
EL10Ac8g20421 Beta vulgaris HOM05D003630 ORTHO05D004151 5.1e-23 111.3 125 60.0
Dinv40586 Davidia involucrata HOM05D003630 ORTHO05D004151 5.1e-23 111.3 110 64.5
Potri.004G047100 Populus trichocarpa HOM05D003630 ORTHO05D004151 5.1e-23 111.3 112 62.5
CSS0037340 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 8.7e-23 110.5 109 65.1
TWI38G1867 Tripterygium wilfordii HOM05D003630 ORTHO05D004151 8.7e-23 110.5 108 66.7
Duzib235G1039 Durio zibethinus HOM05D003630 ORTHO05D004151 1.1e-22 110.2 109 63.3
SEGI_31386 Sequoiadendron giganteum HOM05D003630 ORTHO05D004151 1.1e-22 110.2 137 47.4
A02p28330 Brassica napus HOM05D003630 ORTHO05D004151 1.5e-22 109.8 120 52.5
BcaB02g10597 Brassica carinata HOM05D003630 ORTHO05D004151 4.3e-22 108.2 113 50.4
Thhalv10003427m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 4.3e-22 108.2 121 51.2
HPP92_014190 Vanilla planifolia HOM05D003630 ORTHO05D004151 4.3e-22 108.2 118 47.5
Sp4g16220 Schrenkiella parvula HOM05D003630 ORTHO05D004151 5.6e-22 107.8 113 50.4
Sp2g09130 Schrenkiella parvula HOM05D003630 ORTHO05D004151 7.3e-22 107.5 120 50.0
AT2G33830 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 9.6e-22 107.1 113 49.6
C02p44910 Brassica napus HOM05D003630 ORTHO05D004151 1.3e-21 106.7 120 50.8
BolC2t10526H Brassica oleracea HOM05D003630 ORTHO05D004151 1.3e-21 106.7 120 50.8
BraA02t07868Z Brassica rapa HOM05D003630 ORTHO05D004151 1.3e-21 106.7 120 50.8
Carub.0004s1550 Capsella rubella HOM05D003630 ORTHO05D004151 1.3e-21 106.7 113 49.6
A03p18920 Brassica napus HOM05D003630 ORTHO05D004151 1.6e-21 106.3 114 49.1
AL4G29600 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 2.1e-21 105.9 111 50.5
AT5G44300 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 2.1e-21 105.9 120 50.0
Manes.16G030000 Manihot esculenta HOM05D003630 ORTHO05D004151 2.1e-21 105.9 106 64.2
BcaC02g11461 Brassica carinata HOM05D003630 ORTHO05D004151 2.8e-21 105.5 113 48.7
C04p15210 Brassica napus HOM05D003630 ORTHO05D004151 2.8e-21 105.5 113 48.7
BolC4t23094H Brassica oleracea HOM05D003630 ORTHO05D004151 2.8e-21 105.5 113 48.7
Aa31LG9G8870 Aethionema arabicum HOM05D003630 ORTHO05D004151 3.6e-21 105.1 121 50.4
A05p11750 Brassica napus HOM05D003630 ORTHO05D004151 3.6e-21 105.1 113 48.7
BraA05t20119Z Brassica rapa HOM05D003630 ORTHO05D004151 3.6e-21 105.1 113 48.7
DCAR_008021 Daucus carota HOM05D003630 ORTHO05D004151 3.6e-21 105.1 122 59.0
AT1G28330 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 6.2e-21 104.4 111 54.1
BcaB01g03917 Brassica carinata HOM05D003630 ORTHO05D004151 6.2e-21 104.4 113 48.7
BcaC01g05821 Brassica carinata HOM05D003630 ORTHO05D004151 6.2e-21 104.4 113 48.7
BcaC01g05822 Brassica carinata HOM05D003630 ORTHO05D004151 6.2e-21 104.4 113 48.7
BolC3t14590H Brassica oleracea HOM05D003630 ORTHO05D004151 6.2e-21 104.4 113 48.7
BraA03t11151Z Brassica rapa HOM05D003630 ORTHO05D004151 6.2e-21 104.4 113 48.7
COL.COLO4_31436 Corchorus olitorius HOM05D003630 ORTHO05D004151 6.2e-21 104.4 121 61.2
AL8G15690 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 1.1e-20 103.6 120 49.2
Carub.0008s0422 Capsella rubella HOM05D003630 ORTHO05D004151 1.1e-20 103.6 120 49.2
AL1G41920 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 1.4e-20 103.2 119 51.3
CARHR178890 Cardamine hirsuta HOM05D003630 ORTHO05D004151 2.4e-20 102.4 122 58.2
Atru.chr10.1820 Acer truncatum HOM05D003630 ORTHO05D004151 3.1e-20 102.1 110 62.7
Atru.chr10.1837 Acer truncatum HOM05D003630 ORTHO05D004151 3.1e-20 102.1 110 62.7
HanXRQChr04g0123791 Helianthus annuus HOM05D003630 ORTHO05D004151 3.1e-20 102.1 113 55.8
THA.LOC104814224 Tarenaya hassleriana HOM05D003630 ORTHO05D004151 4.0e-20 101.7 112 58.9
CARHR027820 Cardamine hirsuta HOM05D003630 ORTHO05D004151 5.3e-20 101.3 121 52.9
Sp1g24570 Schrenkiella parvula HOM05D003630 ORTHO05D004151 5.3e-20 101.3 108 55.6
Ciclev10017162m.g Citrus clementina HOM05D003630 ORTHO05D004151 1.2e-19 100.1 110 61.8
CARHR127940 Cardamine hirsuta HOM05D003630 ORTHO05D004151 2.6e-19 99.0 111 46.8
Thhalv10017461m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 3.4e-19 98.6 113 47.8
Lsat_1_v5_gn_7_20981 Lactuca sativa HOM05D003630 ORTHO05D004151 3.4e-19 98.6 108 53.7
Aa31sc86G60 Aethionema arabicum HOM05D003630 ORTHO05D004151 5.8e-19 97.8 107 50.5
A09p37730 Brassica napus HOM05D003630 ORTHO05D004151 7.6e-19 97.4 117 49.6
C05p27220 Brassica napus HOM05D003630 ORTHO05D004151 7.6e-19 97.4 117 49.6
BraA09t39285Z Brassica rapa HOM05D003630 ORTHO05D004151 7.6e-19 97.4 117 49.6
Gorai.009G167500 Gossypium raimondii HOM05D003630 ORTHO05D004151 7.6e-19 97.4 101 52.5
Sc24g0001020 Simmondsia chinensis HOM05D003630 ORTHO05D004151 9.9e-19 97.1 109 51.4
Sabra04G0029500 Salix brachista HOM05D003630 ORTHO05D004151 1.3e-18 96.7 115 58.3
Aa31sc652G110 Aethionema arabicum HOM05D003630 ORTHO05D004151 2.2e-18 95.9 113 46.0
Aa31sc652G20 Aethionema arabicum HOM05D003630 ORTHO05D004151 2.2e-18 95.9 113 46.0
BolC5t31435H Brassica oleracea HOM05D003630 ORTHO05D004151 2.2e-18 95.9 117 47.9
PSO675G3190 Papaver somniferum HOM05D003630 ORTHO05D004151 1.9e-17 92.8 118 46.6
Sopen03g002370 Solanum pennellii HOM05D003630 ORTHO05D004151 9.3e-17 90.5 55 78.2
Rhsim02G0132700 Rhododendron simsii HOM05D003630 ORTHO05D004151 2.1e-16 89.4 112 43.8
Sed0007569 Sechium edule HOM05D003630 ORTHO05D004151 3.5e-16 88.6 103 46.6
BcaC03g16649 Brassica carinata HOM05D003630 ORTHO05D004151 1.0e-15 87.0 108 48.1
C03p22060 Brassica napus HOM05D003630 ORTHO05D004151 1.8e-15 86.3 101 45.5
CAN.G529.26 Capsicum annuum HOM05D003630 ORTHO05D004151 2.3e-15 85.9 50 74.0
Lsat_1_v5_gn_1_124360 Lactuca sativa HOM05D003630 ORTHO05D004151 2.3e-15 85.9 101 46.5
Pp3c15_6160 Physcomitrium patens HOM05D003630 ORTHO05D004151 2.3e-15 85.9 148 33.1
ECA248G1596 Erigeron canadensis HOM05D000885 ORTHO05D008875 8.7e-15 84.0 54 66.7
Sc17g0006070 Simmondsia chinensis HOM05D003630 ORTHO05D004151 3.3e-14 82.0 111 68.5
MD14G1054500 Malus domestica HOM05D003630 ORTHO05D004151 7.4e-14 80.9 96 45.8
BcaB07g30534 Brassica carinata HOM05D003630 ORTHO05D004151 4.8e-13 78.2 104 47.1
Mapoly0057s0054 Marchantia polymorpha HOM05D003630 ORTHO05D004151 1.4e-12 76.6 141 34.8
AagrBONN_evm.TU.Sc2ySwM_228.5600 Anthoceros agrestis HOM05D003630 ORTHO05D004151 1.8e-12 76.3 150 32.7
SMO367G0919 Selaginella moellendorffii HOM05D003630 ORTHO05D004151 2.4e-12 75.9 117 37.6
SMO343G0126 Selaginella moellendorffii HOM05D003630 ORTHO05D004151 2.0e-11 72.8 157 31.8
Eucgr.E03257 Eucalyptus grandis HOM05D003630 ORTHO05D004151 1.2e-08 63.5 29 100.0
AagrBONN_evm.TU.Sc2ySwM_362.1976 Anthoceros agrestis HOM05D003630 ORTHO05D004151 1.6e-08 63.2 42 59.5
Aa31LG9G7730 Aethionema arabicum HOM05D003630 ORTHO05D004151 4.6e-08 61.6 44 68.2
Eucgr.D00606 Eucalyptus grandis HOM05D003630 ORTHO05D004151 4.6e-08 61.6 31 90.3
COL.COLO4_29750 Corchorus olitorius HOM05D003630 ORTHO05D004151 1.1e-06 57.0 29 86.2
Peaxi162Scf00461g01011 Petunia axillaris HOM05D003630 ORTHO05D004151 1.5e-06 56.6 32 75.0
Actinidia26134 Actinidia chinensis HOM05D003630 ORTHO05D004151 1.9e-06 56.2 35 68.6
Pp3c24_1050 Physcomitrium patens HOM05D003630 ORTHO05D004151 2.5e-06 55.8 152 28.3
Pp3c10_24000 Physcomitrium patens HOM05D003630 ORTHO05D004151 9.6e-06 53.9 155 26.5


User provided reference genes

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