Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.15G061600 Glycine max HOM05D006483 ORTHO05D007837 1.9e-239 832.0 392 100.0
VMungo0540G0518 Vigna mungo HOM05D006483 ORTHO05D007837 4.1e-218 761.1 392 91.3
Phvul.006G198100 Phaseolus vulgaris HOM05D006483 ORTHO05D007837 9.0e-218 760.0 392 90.6
Lj1g0015418 Lotus japonicus HOM05D006483 ORTHO05D007837 1.0e-216 756.5 390 90.0
Ca_00195_v3 Cicer arietinum L. HOM05D006483 ORTHO05D007837 1.5e-204 716.1 399 84.7
arahy.Tifrunner.gnm1.ann1.SKNB9F Arachis hypogaea HOM05D006483 ORTHO05D007837 7.0e-202 707.2 415 81.4
Lalb_Chr15g0090221 Lupinus albus HOM05D006483 ORTHO05D007837 1.6e-198 696.0 402 81.8
Psat1g212200 Pisum sativum HOM05D006483 ORTHO05D007837 2.7e-198 695.3 399 82.0
Medtr2g010480 Medicago truncatula HOM05D006483 ORTHO05D007837 2.0e-196 689.1 403 81.1
CiPaw.06G161800 Carya illinoinensis HOM05D006483 ORTHO05D007837 1.5e-191 672.9 392 80.9
Cfa004758 Carpinus fangiana HOM05D006483 ORTHO05D007837 9.4e-191 670.2 397 80.1
Ciclev10030436m.g Citrus clementina HOM05D006483 ORTHO05D007837 1.4e-189 666.4 390 80.0
Duzib132G0719 Durio zibethinus HOM05D006483 ORTHO05D007837 3.4e-188 661.8 397 78.8
QL11p027690 Quercus lobata HOM05D006483 ORTHO05D007837 4.4e-188 661.4 394 79.9
Atru.chr5.2145 Acer truncatum HOM05D006483 ORTHO05D007837 1.7e-187 659.4 374 82.4
Cpa.g.sc20.69 Carica papaya HOM05D006483 ORTHO05D007837 2.2e-187 659.1 354 84.2
Rhsim11G0146300 Rhododendron simsii HOM05D006483 ORTHO05D007837 9.1e-186 653.7 388 79.6
Manes.07G049300 Manihot esculenta HOM05D006483 ORTHO05D007837 4.5e-185 651.4 385 80.3
Sabra16G0180000 Salix brachista HOM05D006483 ORTHO05D007837 5.9e-185 651.0 351 84.9
Dinv09500 Davidia involucrata HOM05D006483 ORTHO05D007837 1.3e-184 649.8 330 87.9
vmacro01915 Vaccinium macrocarpon HOM05D006483 ORTHO05D007837 1.7e-184 649.4 366 82.2
Gohir.D12G041300 Gossypium hirsutum HOM05D006483 ORTHO05D007837 2.9e-184 648.7 394 77.4
Gorai.008G043200 Gossypium raimondii HOM05D006483 ORTHO05D007837 3.8e-184 648.3 395 77.2
Eucgr.I02515 Eucalyptus grandis HOM05D006483 ORTHO05D007837 6.5e-184 647.5 354 82.5
Potri.001G287700 Populus trichocarpa HOM05D006483 ORTHO05D007837 6.5e-184 647.5 351 84.3
Thecc.02G034600 Theobroma cacao HOM05D006483 ORTHO05D007837 6.5e-184 647.5 380 79.7
Lsat_1_v5_gn_5_110541 Lactuca sativa HOM05D006483 ORTHO05D007837 8.5e-184 647.1 394 77.9
CsaV3_4G014600 Cucumis sativus L. HOM05D006483 ORTHO05D007837 1.1e-183 646.7 395 78.0
Gohir.A12G031000 Gossypium hirsutum HOM05D006483 ORTHO05D007837 1.5e-183 646.4 394 77.4
PGR142G2962 Punica granatum HOM05D006483 ORTHO05D007837 1.9e-183 646.0 358 81.8
GSVIVG01036968001 Vitis vinifera HOM05D006483 ORTHO05D007837 2.5e-183 645.6 351 83.8
arahy.Tifrunner.gnm1.ann1.AKE21I Arachis hypogaea HOM05D006483 ORTHO05D007837 3.2e-183 645.2 415 76.1
Nn6g34537 Nelumbo nucifera HOM05D006483 ORTHO05D007837 3.2e-183 645.2 363 80.4
ClCG10G009710 Citrullus lanatus HOM05D006483 ORTHO05D007837 7.2e-183 644.0 396 77.0
Prupe.8G157100 Prunus persica HOM05D006483 ORTHO05D007837 1.2e-182 643.3 393 77.1
Sed0015964 Sechium edule HOM05D006483 ORTHO05D007837 1.6e-182 642.9 394 77.2
TWI59G1265 Tripterygium wilfordii HOM05D006483 ORTHO05D007837 2.7e-182 642.1 381 80.1
HanXRQChr10g0297661 Helianthus annuus HOM05D006483 ORTHO05D007837 1.8e-181 639.4 390 77.7
CANSAT25G2975 Cannabis sativa HOM05D006483 ORTHO05D007837 2.6e-180 635.6 350 83.1
Duzib248G0339 Durio zibethinus HOM05D006483 ORTHO05D007837 3.4e-180 635.2 327 88.4
TAR376G0523 Trochodendron aralioides HOM05D006483 ORTHO05D007837 5.7e-180 634.4 365 80.0
Cc02_g20380 Coffea canephora HOM05D006483 ORTHO05D007837 7.5e-180 634.0 368 80.7
CiPaw.05G024900 Carya illinoinensis HOM05D006483 ORTHO05D007837 1.3e-179 633.3 327 87.2
MD10G1115000 Malus domestica HOM05D006483 ORTHO05D007837 1.3e-179 633.3 382 77.5
RcHm_v2.0_Chr6g0246361 Rosa chinensis HOM05D006483 ORTHO05D007837 2.2e-179 632.5 389 75.8
Sc14g0002760 Simmondsia chinensis HOM05D006483 ORTHO05D007837 6.3e-179 630.9 389 76.3
FAN24G1160 Fragaria x ananassa HOM05D006483 ORTHO05D007837 8.3e-179 630.6 387 77.3
COL.COLO4_17833 Corchorus olitorius HOM05D006483 ORTHO05D007837 2.4e-178 629.0 351 82.9
FAN20G1555 Fragaria x ananassa HOM05D006483 ORTHO05D007837 1.2e-177 626.7 387 77.3
FvH4_2g02550 Fragaria vesca HOM05D006483 ORTHO05D007837 2.7e-177 625.5 387 76.7
Solyc11g044310.2 Solanum lycopersicum HOM05D006483 ORTHO05D007837 2.9e-176 622.1 378 78.3
Sopen11g019810 Solanum pennellii HOM05D006483 ORTHO05D007837 8.6e-176 620.5 378 78.0
EL10Ac9g22152 Beta vulgaris HOM05D006483 ORTHO05D007837 5.6e-175 617.8 330 84.5
FAN15G2441 Fragaria x ananassa HOM05D006483 ORTHO05D007837 8.0e-174 614.0 327 84.7
ECA234G3552 Erigeron canadensis HOM05D006483 ORTHO05D007837 1.0e-173 613.6 317 86.4
CAN.G475.27 Capsicum annuum HOM05D006483 ORTHO05D007837 8.9e-173 610.5 373 76.4
Lj5C223T22 Lonicera japonica HOM05D006483 ORTHO05D007837 8.9e-173 610.5 357 80.4
PSO675G7999 Papaver somniferum HOM05D006483 ORTHO05D007837 1.5e-172 609.8 383 74.2
FAN27G0654 Fragaria x ananassa HOM05D006483 ORTHO05D007837 2.0e-172 609.4 410 72.4
PSO541G5548 Papaver somniferum HOM05D006483 ORTHO05D007837 3.4e-172 608.6 323 83.6
Peaxi162Scf00152g00613 Petunia axillaris HOM05D006483 ORTHO05D007837 4.4e-172 608.2 351 79.8
Aqoxy6G02925 Aquilegia oxysepala HOM05D006483 ORTHO05D007837 5.7e-172 607.8 319 85.3
CSS0046506 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 9.8e-172 607.1 366 78.1
Aa31LG8G12670 Aethionema arabicum HOM05D006483 ORTHO05D007837 1.7e-171 606.3 392 71.9
Thhalv10022723m.g Eutrema salsugineum HOM05D006483 ORTHO05D007837 2.9e-171 605.5 390 72.8
THA.LOC104819515 Tarenaya hassleriana HOM05D006483 ORTHO05D007837 2.9e-171 605.5 404 71.8
Carub.0003s2843 Capsella rubella HOM05D006483 ORTHO05D007837 8.3e-171 604.0 394 72.6
SalBow6G1047 Salvia bowleyana HOM05D006483 ORTHO05D007837 1.8e-170 602.8 401 72.1
CARHR105280 Cardamine hirsuta HOM05D006483 ORTHO05D007837 4.6e-169 598.2 315 84.4
Sp3g27660 Schrenkiella parvula HOM05D006483 ORTHO05D007837 7.8e-169 597.4 393 72.5
AL3G45940 Arabidopsis lyrata HOM05D006483 ORTHO05D007837 2.3e-168 595.9 334 80.2
MELO3C018038.2 Cucumis melo HOM05D006483 ORTHO05D007837 5.0e-168 594.7 426 69.2
Migut.B00501 Erythranthe guttata HOM05D006483 ORTHO05D007837 1.9e-167 592.8 323 82.4
BolC3t17891H Brassica oleracea HOM05D006483 ORTHO05D007837 3.3e-167 592.0 315 83.5
BcaC01g03099 Brassica carinata HOM05D006483 ORTHO05D007837 5.6e-167 591.3 315 83.5
A03p45170 Brassica napus HOM05D006483 ORTHO05D007837 1.2e-166 590.1 315 83.5
BraA03t13652Z Brassica rapa HOM05D006483 ORTHO05D007837 1.2e-166 590.1 315 83.5
ATR0739G015 Amborella trichopoda HOM05D006483 ORTHO05D007837 2.1e-166 589.3 315 83.5
DCAR_029840 Daucus carota HOM05D006483 ORTHO05D007837 2.8e-166 589.0 332 80.4
BcaB08g34553 Brassica carinata HOM05D006483 ORTHO05D007837 1.4e-165 586.6 323 82.0
AT2G14260 Arabidopsis thaliana HOM05D006483 ORTHO05D007837 2.6e-164 582.4 316 82.9
SGA_v2.0_scaffold342G49421 Striga asiatica HOM05D006483 ORTHO05D007837 5.8e-164 581.3 405 68.6
C03p56040 Brassica napus HOM05D006483 ORTHO05D007837 1.4e-162 576.6 344 76.5
CSS0033600 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 2.4e-162 575.9 356 77.0
unitig_21.g20708 Utricularia gibba HOM05D006483 ORTHO05D007837 1.6e-161 573.2 326 78.5
TAR628G0755 Trochodendron aralioides HOM05D006483 ORTHO05D007837 1.1e-157 560.5 297 83.8
CDE02G1970 Ceratophyllum demersum HOM05D006483 ORTHO05D007837 1.8e-157 559.7 394 68.5
HPP92_006303 Vanilla planifolia HOM05D006483 ORTHO05D007837 4.4e-156 555.1 328 76.5
MSTRG.16655 Avicennia marina HOM05D006483 ORTHO05D007837 7.1e-154 547.7 285 84.6
Haze_10356 Corylus avellana HOM05D006483 ORTHO05D007837 6.2e-150 534.6 643 48.4
AUR62027055 Chenopodium quinoa HOM05D006483 ORTHO05D007837 5.8e-148 528.1 330 74.2
Zm00001eb292750 Zea mays HOM05D006483 ORTHO05D007837 1.9e-146 523.1 284 81.7
SMO145G0068 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 6.6e-144 514.6 311 72.3
AagrBONN_evm.TU.Sc2ySwM_344.4362 Anthoceros agrestis HOM05D006483 ORTHO05D007837 9.6e-143 510.8 324 68.5
Pp3c4_27270 Physcomitrium patens HOM05D006483 ORTHO05D007837 1.8e-141 506.5 322 68.9
Mapoly0001s0344 Marchantia polymorpha HOM05D006483 ORTHO05D007837 4.0e-141 505.4 316 69.9
CBR_g8564 Chara braunii HOM05D006483 ORTHO05D007837 1.1e-127 460.7 315 65.1
Os05g0513900 Oryza sativa ssp. japonica HOM05D006483 ORTHO05D007837 3.8e-123 445.7 245 80.8
Ah.01g024350 Amaranthus hybridus HOM05D006483 ORTHO05D007837 1.3e-112 410.6 271 72.3
Nitab4.5_0007517g0010 Nicotiana tabacum HOM05D006483 ORTHO05D007837 9.6e-111 404.4 238 78.2
AUR62030898 Chenopodium quinoa HOM05D006483 ORTHO05D007837 6.7e-104 381.7 284 64.8
Actinidia00335 Actinidia chinensis HOM05D006483 ORTHO05D007837 9.7e-103 377.9 227 78.4
Mapoly0142s0028 Marchantia polymorpha HOM05D006483 ORTHO05D007837 8.2e-94 348.2 351 47.3
AagrBONN_evm.TU.Sc2ySwM_344.1401 Anthoceros agrestis HOM05D006483 ORTHO05D007837 3.8e-83 312.8 351 43.3
SMO353G0285 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 2.7e-81 306.6 314 46.2
SMO364G0301 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 4.7e-81 305.8 313 45.7
MBI16_g27214_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 1.1e-74 284.6 166 78.3
MBI16_g41225_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 6.3e-62 242.3 191 61.3
Zm00001eb142680 Zea mays HOM05D006483 ORTHO05D007837 1.1e-58 231.5 186 58.1
PRCOL_00002897 Prasinoderma coloniale HOM05D006483 ORTHO05D007837 3.0e-56 223.4 331 40.2
SEGI_12853 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 6.8e-56 222.2 126 77.0
EL10Ac8g19599 Beta vulgaris HOM05D006483 ORTHO05D007837 1.1e-50 204.9 153 67.3
MD05G1112500 Malus domestica HOM05D006483 ORTHO05D007837 4.0e-48 196.4 204 52.0
Cre08.g375600 Chlamydomonas reinhardtii HOM05D006483 ORTHO05D007837 4.9e-46 189.5 196 44.9
Oeu007495.1 Olea europaea HOM05D006483 ORTHO05D007837 2.5e-34 150.6 85 77.6
MD05G1112400 Malus domestica HOM05D006483 ORTHO05D007837 2.6e-23 114.0 59 83.1
SEGI_05070 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 2.8e-17 94.0 84 53.6
arahy.Tifrunner.gnm1.ann1.W5BQ9H Arachis hypogaea HOM05D006483 ORTHO05D000252 2.4e-13 80.9 63 63.5
TPR.G27616 Trifolium pratense HOM05D006483 ORTHO05D007837 2.4e-13 80.9 39 84.6
SEGI_04316 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 3.7e-09 67.0 34 76.5
Cfa023956 Carpinus fangiana HOM05D026080 ORTHO05D034125 3.4e-07 60.5 116 31.0
Zm00001eb049690 Zea mays HOM05D003600 ORTHO05D004129 1.3e-06 58.5 35 65.7
Ciclev10016000m.g Citrus clementina HOM05D000363 ORTHO05D000236 3.8e-06 57.0 132 25.8
Hma1.2p1_0200F.1_g086050 Hydrangea macrophylla HOM05D006483 ORTHO05D007837 4.9e-06 56.6 68 44.1


User provided reference genes

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