Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.15G030900 Glycine max HOM05D010840 ORTHO05D009787 2.7e-247 859.0 742 100.0
Glyma.13G343400 Glycine max HOM05D010840 ORTHO05D009787 6.4e-63 246.5 192 71.9
Phvul.005G152200 Phaseolus vulgaris HOM05D010840 ORTHO05D009787 5.6e-51 206.8 803 53.4
VMungo1080G1829 Vigna mungo HOM05D002632 ORTHO05D002881 1.3e-47 195.7 166 63.9
arahy.Tifrunner.gnm1.ann1.JQ8CCA Arachis hypogaea HOM05D010840 ORTHO05D009787 8.7e-36 156.4 263 43.3
Ca_01266_v3 Cicer arietinum L. HOM05D010840 ORTHO05D009787 8.1e-34 149.8 298 44.6
arahy.Tifrunner.gnm1.ann1.0UQ2B1 Arachis hypogaea HOM05D010840 ORTHO05D009787 1.3e-28 132.5 366 41.0
Medtr2g098610 Medicago truncatula HOM05D010840 ORTHO05D009787 8.7e-28 129.8 776 28.4
Lalb_Chr22g0352191 Lupinus albus HOM05D010840 ORTHO05D009787 7.3e-27 126.7 236 41.1
Lalb_Chr24g0396871 Lupinus albus HOM05D010840 ORTHO05D009787 3.6e-26 124.4 759 34.7
Glyma.12G053300 Glycine max HOM05D010840 ORTHO05D009787 2.6e-24 118.2 195 42.6
TPR.G18857 Trifolium pratense HOM05D010840 ORTHO05D009787 7.6e-24 116.7 410 41.5
Glyma.11G128800 Glycine max HOM05D010840 ORTHO05D009787 2.9e-23 114.8 166 45.8
Lj3g0021471 Lotus japonicus HOM05D010840 ORTHO05D009787 4.9e-23 114.0 255 34.9
TPR.G12768 Trifolium pratense HOM05D010840 ORTHO05D009787 4.9e-23 114.0 375 37.1
Phvul.011G055300 Phaseolus vulgaris HOM05D010840 ORTHO05D009787 1.3e-20 105.9 191 39.8
Medtr2g098620 Medicago truncatula HOM05D010840 ORTHO05D009787 3.9e-20 104.4 204 40.7
VMungo1127G1898 Vigna mungo HOM05D010840 ORTHO05D009787 1.5e-19 102.4 181 42.5
QL10p048331 Quercus lobata HOM05D008213 ORTHO05D009787 2.5e-19 101.7 324 28.7
CiPaw.01G101800 Carya illinoinensis HOM05D008213 ORTHO05D009787 8.1e-18 96.7 170 38.2
Psat1g007320 Pisum sativum HOM05D010840 ORTHO05D009787 3.1e-17 94.7 360 35.6
Psat1g007360 Pisum sativum HOM05D010840 ORTHO05D009787 5.3e-17 94.0 358 36.0
Thecc.04G185000 Theobroma cacao HOM05D008213 ORTHO05D009787 1.5e-16 92.4 192 35.4
Gorai.005G020000 Gossypium raimondii HOM05D008213 ORTHO05D009787 2.9e-15 88.2 178 34.3
Gohir.A02G015000 Gossypium hirsutum HOM05D007318 ORTHO05D009289 1.1e-14 86.3 161 35.4
Gohir.D02G016500 Gossypium hirsutum HOM05D008213 ORTHO05D009787 4.2e-14 84.3 163 35.6
Duzib151G0756 Durio zibethinus HOM05D008213 ORTHO05D009787 9.3e-14 83.2 192 34.4
Manes.11G119400 Manihot esculenta HOM05D008213 ORTHO05D009787 9.3e-14 83.2 213 31.9
Dinv44200 Davidia involucrata HOM05D008213 ORTHO05D009787 6.0e-13 80.5 202 32.7
Prupe.1G190600 Prunus persica HOM05D008213 ORTHO05D009787 6.0e-13 80.5 172 34.9
GSVIVG01010744001 Vitis vinifera HOM05D008213 ORTHO05D009787 5.7e-11 73.9 184 34.8
CSS0004350 Camellia sinensis var. sinensis HOM05D008213 ORTHO05D009787 1.3e-10 72.8 131 33.6
Potri.007G127200 Populus trichocarpa HOM05D008213 ORTHO05D009787 1.6e-10 72.4 169 30.2
Hma1.2p1_0754F.1_g213080 Hydrangea macrophylla HOM05D008213 ORTHO05D009787 4.8e-10 70.9 191 31.9
Sabra07G0103200 Salix brachista HOM05D008213 ORTHO05D009787 4.8e-10 70.9 165 31.5
Aqoxy5G00188 Aquilegia oxysepala HOM05D008213 ORTHO05D009787 2.0e-08 65.5 162 32.1
HanXRQChr02g0058051 Helianthus annuus HOM05D008213 ORTHO05D009787 2.6e-08 65.1 141 33.3
TAR362G1061 Trochodendron aralioides HOM05D008213 ORTHO05D009787 2.6e-08 65.1 167 28.7
Cpa.g.sc71.7 Carica papaya HOM05D008213 ORTHO05D009787 4.5e-08 64.3 147 31.3
PGR142G1601 Punica granatum HOM05D008213 ORTHO05D009787 4.5e-08 64.3 165 32.7
COL.COLO4_24404 Corchorus olitorius HOM05D008213 ORTHO05D009787 5.9e-08 63.9 218 26.1
Ciclev10023340m.g Citrus clementina HOM05D008213 ORTHO05D009787 1.0e-07 63.2 177 31.6
ClCG07G015580 Citrullus lanatus HOM05D008213 ORTHO05D009787 1.7e-07 62.4 182 33.0
MELO3C017723.2 Cucumis melo HOM05D008213 ORTHO05D009787 5.0e-07 60.8 161 28.0
RcHm_v2.0_Chr4g0407081 Rosa chinensis HOM05D008213 ORTHO05D009787 5.0e-07 60.8 169 29.6
ECA233G5141 Erigeron canadensis HOM05D008213 ORTHO05D009787 2.5e-06 58.5 161 30.4
CsaV3_4G003270 Cucumis sativus L. HOM05D008213 ORTHO05D009787 3.2e-06 58.2 168 30.4
DCAR_017617 Daucus carota HOM05D008213 ORTHO05D009787 5.5e-06 57.4 192 30.2


User provided reference genes

Program Settings