Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.15G024900 Glycine max HOM05D007444 ORTHO05D009359 2.6e-137 492.3 239 100.0
Phvul.005G158200 Phaseolus vulgaris HOM05D007444 ORTHO05D009359 1.4e-109 400.2 242 82.2
Medtr2g099820 Medicago truncatula HOM05D007444 ORTHO05D009359 3.8e-72 275.8 236 57.6
Ca_01210_v3 Cicer arietinum L. HOM05D007444 ORTHO05D009359 1.1e-71 274.2 243 58.8
TPR.G6573 Trifolium pratense HOM05D007444 ORTHO05D009359 1.2e-70 270.8 233 62.2
Lalb_Chr14g0372751 Lupinus albus HOM05D007444 ORTHO05D009359 2.3e-69 266.5 251 59.8
Psat5g292040 Pisum sativum HOM05D007444 ORTHO05D009359 8.6e-64 248.1 237 58.2
Lj3g0023369 Lotus japonicus HOM05D007444 ORTHO05D009359 2.8e-62 243.0 246 54.5
Lj9A520T86 Lonicera japonica HOM05D007444 ORTHO05D009359 8.3e-59 231.5 263 48.3
CSS0030092 Camellia sinensis var. sinensis HOM05D007444 ORTHO05D009359 1.3e-56 224.2 266 47.0
GSVIVG01016873001 Vitis vinifera HOM05D007444 ORTHO05D009359 1.2e-52 211.1 239 47.3
Eucgr.F03140 Eucalyptus grandis HOM05D007444 ORTHO05D009359 1.5e-52 210.7 257 47.1
Aqoxy7G01186 Aquilegia oxysepala HOM05D007444 ORTHO05D009359 4.4e-52 209.1 274 40.1
CiPaw.02G139200 Carya illinoinensis HOM05D007444 ORTHO05D009359 1.3e-51 207.6 263 47.5
RcHm_v2.0_Chr2g0143591 Rosa chinensis HOM05D007444 ORTHO05D009359 2.9e-51 206.5 258 46.9
PSO017G2704 Papaver somniferum HOM05D007444 ORTHO05D009359 1.4e-50 204.1 273 43.2
arahy.Tifrunner.gnm1.ann1.ZV36U3 Arachis hypogaea HOM05D007444 ORTHO05D009359 5.4e-50 202.2 255 47.5
Actinidia09035 Actinidia chinensis HOM05D007444 ORTHO05D009359 9.2e-50 201.4 269 43.5
Sed0011511 Sechium edule HOM05D007444 ORTHO05D009359 9.2e-50 201.4 253 44.3
FAN14G4700 Fragaria x ananassa HOM05D007444 ORTHO05D009359 1.2e-49 201.1 257 46.3
MD09G1191700 Malus domestica HOM05D007444 ORTHO05D009359 1.6e-49 200.7 259 46.3
arahy.Tifrunner.gnm1.ann1.F397YD Arachis hypogaea HOM05D007444 ORTHO05D009359 2.1e-49 200.3 255 47.1
TAR383G0129 Trochodendron aralioides HOM05D007444 ORTHO05D009359 2.7e-49 199.9 287 40.1
FvH4_6g33680 Fragaria vesca HOM05D007444 ORTHO05D009359 4.6e-49 199.1 257 46.3
PSO478G1587 Papaver somniferum HOM05D007444 ORTHO05D009359 4.6e-49 199.1 273 42.5
QL05p011652 Quercus lobata HOM05D007444 ORTHO05D009359 7.8e-49 198.4 268 46.3
Prupe.3G047900 Prunus persica HOM05D007444 ORTHO05D009359 1.0e-48 198.0 276 45.7
Duzib235G0092 Durio zibethinus HOM05D007444 ORTHO05D009359 6.6e-48 195.3 256 47.7
Nitab4.5_0000255g0240 Nicotiana tabacum HOM05D007444 ORTHO05D009359 6.6e-48 195.3 255 42.4
QL05p011272 Quercus lobata HOM05D007444 ORTHO05D009359 1.9e-47 193.7 267 45.7
Haze_15975 Corylus avellana HOM05D007444 ORTHO05D009359 2.5e-47 193.4 262 45.8
Cc04_g01830 Coffea canephora HOM05D007444 ORTHO05D009359 3.3e-47 193.0 256 43.4
Potri.001G196700 Populus trichocarpa HOM05D007444 ORTHO05D009359 3.3e-47 193.0 247 47.0
Hund20831 Selenicereus undatus HOM05D007444 ORTHO05D009359 4.3e-47 192.6 261 43.3
vmacro17027 Vaccinium macrocarpon HOM05D007444 ORTHO05D009359 1.6e-46 190.7 265 41.5
Nitab4.5_0005918g0020 Nicotiana tabacum HOM05D007444 ORTHO05D009359 3.6e-46 189.5 266 41.7
FAN09G3948 Fragaria x ananassa HOM05D007444 ORTHO05D009359 4.7e-46 189.1 257 43.2
AL3G25850 Arabidopsis lyrata HOM05D007444 ORTHO05D009359 8.1e-46 188.3 238 46.2
Manes.11G025100 Manihot esculenta HOM05D007444 ORTHO05D009359 1.1e-45 188.0 259 41.7
Sc12g0010310 Simmondsia chinensis HOM05D007444 ORTHO05D009359 5.2e-45 185.7 238 45.0
AUR62009843 Chenopodium quinoa HOM05D007444 ORTHO05D009359 2.6e-44 183.3 280 39.3
THA.LOC104815643 Tarenaya hassleriana HOM05D007444 ORTHO05D009359 5.8e-44 182.2 254 42.5
Ah.08g216430 Amaranthus hybridus HOM05D007444 ORTHO05D009359 7.5e-44 181.8 259 39.4
TWI36G0277 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 6.4e-43 178.7 250 45.2
TWI36G1725 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 6.4e-43 178.7 250 45.2
Sabra01G0143200 Salix brachista HOM05D007444 ORTHO05D009359 1.4e-42 177.6 211 46.9
MSTRG.4771 Avicennia marina HOM05D007444 ORTHO05D009359 1.6e-41 174.1 259 39.4
Cfa003571 Carpinus fangiana HOM05D007444 ORTHO05D009359 2.1e-41 173.7 261 43.7
Ciclev10026127m.g Citrus clementina HOM05D007444 ORTHO05D009359 1.7e-40 170.6 262 41.6
EL10Ac7g16359 Beta vulgaris HOM05D007444 ORTHO05D009359 5.1e-40 169.1 268 38.1
CsaV3_3G043760 Cucumis sativus L. HOM05D007444 ORTHO05D009359 1.1e-39 167.9 248 41.1
Sopen06g022180 Solanum pennellii HOM05D007444 ORTHO05D009359 1.5e-39 167.5 263 39.9
Oeu039953.1 Olea europaea HOM05D007444 ORTHO05D009359 1.9e-39 167.2 267 39.7
PGSC0003DMG400004847 Solanum tuberosum HOM05D007444 ORTHO05D009359 1.9e-39 167.2 263 39.2
Aa31LG8G960 Aethionema arabicum HOM05D007444 ORTHO05D009359 2.5e-39 166.8 215 41.4
Migut.D00964 Erythranthe guttata HOM05D007444 ORTHO05D009359 7.3e-39 165.2 262 40.1
DCAR_022704 Daucus carota HOM05D007444 ORTHO05D009359 1.2e-38 164.5 257 39.7
Carub.0003s1330 Capsella rubella HOM05D007444 ORTHO05D009359 2.1e-38 163.7 233 42.1
ClCG07G013830 Citrullus lanatus HOM05D007444 ORTHO05D009359 2.1e-38 163.7 265 38.9
BraA05t22371Z Brassica rapa HOM05D007444 ORTHO05D009359 2.8e-38 163.3 245 40.0
BcaB06g25436 Brassica carinata HOM05D007444 ORTHO05D009359 6.2e-38 162.2 234 42.3
C05p54050 Brassica napus HOM05D007444 ORTHO05D009359 6.2e-38 162.2 244 40.6
BolC5t34070H Brassica oleracea HOM05D007444 ORTHO05D009359 6.2e-38 162.2 244 40.6
Sp3g11980 Schrenkiella parvula HOM05D007444 ORTHO05D009359 6.2e-38 162.2 253 39.5
Gohir.D06G198800 Gossypium hirsutum HOM05D007444 ORTHO05D009359 1.1e-37 161.4 243 42.4
AT3G13780 Arabidopsis thaliana HOM05D007444 ORTHO05D009359 8.9e-37 158.3 223 41.3
CARHR088510 Cardamine hirsuta HOM05D007444 ORTHO05D009359 8.9e-37 158.3 228 39.5
Gorai.010G231700 Gossypium raimondii HOM05D007444 ORTHO05D009359 8.9e-37 158.3 234 42.3
A05p35640 Brassica napus HOM05D007444 ORTHO05D009359 1.2e-36 157.9 166 47.0
CAN.G825.32 Capsicum annuum HOM05D007444 ORTHO05D009359 3.4e-36 156.4 267 37.5
Thhalv10021210m.g Eutrema salsugineum HOM05D007444 ORTHO05D009359 3.4e-36 156.4 245 39.6
SGA_v2.0_scaffold68G22914 Striga asiatica HOM05D007444 ORTHO05D009359 4.4e-36 156.0 266 35.3
Peaxi162Scf00207g00133 Petunia axillaris HOM05D007444 ORTHO05D009359 5.8e-36 155.6 193 40.9
COL.COLO4_30661 Corchorus olitorius HOM05D007444 ORTHO05D009359 9.9e-36 154.8 185 44.9
MBI01_g20340_MAGBIO Magnolia biondii HOM05D007444 ORTHO05D009359 9.9e-36 154.8 311 33.8
AUR62038156 Chenopodium quinoa HOM05D007444 ORTHO05D009359 2.9e-35 153.3 187 41.2
CDE05G3416 Ceratophyllum demersum HOM05D007444 ORTHO05D009359 4.2e-34 149.4 284 37.3
HanXRQChr02g0031731 Helianthus annuus HOM05D007444 ORTHO05D009359 5.4e-34 149.1 236 39.4
Lsat_1_v5_gn_1_35640 Lactuca sativa HOM05D007444 ORTHO05D009359 9.3e-34 148.3 266 34.2
MELO3C013088.2 Cucumis melo HOM05D007444 ORTHO05D009359 2.7e-33 146.7 248 37.9
PGR119G0376 Punica granatum HOM05D007444 ORTHO05D009359 2.7e-33 146.7 174 44.3
Gohir.A06G190400 Gossypium hirsutum HOM05D007444 ORTHO05D009359 3.5e-33 146.4 257 38.5
CANSAT56G0761 Cannabis sativa HOM05D007444 ORTHO05D009359 7.8e-33 145.2 264 38.6
QL05p010974 Quercus lobata HOM05D007444 ORTHO05D009359 8.7e-32 141.7 191 43.5
SalBow7G2527 Salvia bowleyana HOM05D007444 ORTHO05D009359 3.1e-29 133.3 245 33.1
HPP92_005228 Vanilla planifolia HOM05D007444 ORTHO05D009359 3.1e-29 133.3 292 32.9
Cpa.g.sc25.50 Carica papaya HOM05D007444 ORTHO05D009359 1.4e-26 124.4 167 44.3
Dinv37906 Davidia involucrata HOM05D007444 ORTHO05D009359 1.1e-21 108.2 163 39.9
Solyc06g062700.3 Solanum lycopersicum HOM05D007444 ORTHO05D009359 1.5e-20 104.4 108 46.3
Glyma.13G348900 Glycine max HOM05D007444 ORTHO05D009359 2.2e-19 100.5 58 93.1
Rhsim12G0206600 Rhododendron simsii HOM05D007444 ORTHO05D009359 1.1e-18 98.2 154 37.0
Zm00001eb277400 Zea mays HOM05D007444 ORTHO05D009359 7.1e-18 95.5 293 29.4
SEGI_13370 Sequoiadendron giganteum HOM05D007444 ORTHO05D009359 1.3e-16 91.3 256 32.0
ECA247G2926 Erigeron canadensis HOM05D000045 ORTHO05D000067 1.4e-13 81.3 157 31.2
Hma1.2p1_0496F.1_g165930 Hydrangea macrophylla HOM05D007444 ORTHO05D009359 1.8e-13 80.9 108 37.0
ATR0109G024 Amborella trichopoda HOM05D007444 ORTHO05D009359 1.2e-12 78.2 114 36.8
Os06g0565300 Oryza sativa ssp. japonica HOM05D007444 ORTHO05D009359 1.3e-11 74.7 66 56.1
QL05p011362 Quercus lobata HOM05D007444 ORTHO05D009359 1.9e-10 70.9 96 43.8


User provided reference genes

Program Settings