Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.15G003800 Glycine max HOM05D008601 ORTHO05D010814 8.6e-11 68.9 35 100.0
Glyma.10G208900 Glycine max HOM05D008601 ORTHO05D010814 3.6e-09 63.5 35 88.6
Lalb_Chr22g0360781 Lupinus albus HOM05D008601 ORTHO05D010814 1.4e-08 61.6 34 88.2
AL2G21540 Arabidopsis lyrata HOM05D008601 ORTHO05D010814 1.8e-08 61.2 33 87.9
ATCG00510 Arabidopsis thaliana HOM05D008601 ORTHO05D010814 1.8e-08 61.2 33 87.9
Glyma.17G173700 Glycine max HOM05D008601 ORTHO05D010814 2.3e-08 60.8 35 88.6
C09p29590 Brassica napus HOM05D008601 ORTHO05D010814 3.1e-08 60.5 33 84.8
BolSC29t60466H Brassica oleracea HOM05D008601 ORTHO05D010814 3.1e-08 60.5 33 84.8
BolSC29t60588H Brassica oleracea HOM05D008601 ORTHO05D010814 3.1e-08 60.5 33 84.8
BolSC35t60751H Brassica oleracea HOM05D008601 ORTHO05D010814 3.1e-08 60.5 33 84.8
BolSC47t61098H Brassica oleracea HOM05D008601 ORTHO05D010814 3.1e-08 60.5 33 84.8
BraSC25t45847Z Brassica rapa HOM05D008601 ORTHO05D010814 3.1e-08 60.5 33 84.8
BraSC25t45867Z Brassica rapa HOM05D008601 ORTHO05D010814 3.1e-08 60.5 33 84.8
BraSC58t46421Z Brassica rapa HOM05D008601 ORTHO05D010814 3.1e-08 60.5 33 84.8
BraSC59t46592Z Brassica rapa HOM05D008601 ORTHO05D010814 3.1e-08 60.5 33 84.8
BolSC35t60645H Brassica oleracea HOM05D008601 ORTHO05D010814 4.0e-08 60.1 32 84.4
PGR111G0070 Punica granatum HOM05D008601 ORTHO05D010814 4.0e-08 60.1 33 87.9
CAN.G1569.13 Capsicum annuum HOM05D008601 ORTHO05D010814 5.2e-08 59.7 32 81.2
GSVIVG01030618001 Vitis vinifera HOM05D008601 ORTHO05D010814 5.2e-08 59.7 34 85.3
C09p54220 Brassica napus HOM05D008601 ORTHO05D010814 8.9e-08 58.9 33 84.8
C09p54260 Brassica napus HOM05D008601 ORTHO05D010814 8.9e-08 58.9 33 84.8
Nitab4.5_0001170g0140 Nicotiana tabacum HOM05D008601 ORTHO05D010814 1.2e-07 58.5 32 87.5
Potri.013G162500 Populus trichocarpa HOM05D008601 ORTHO05D010814 1.2e-07 58.5 33 87.9
BolC9t55820H Brassica oleracea HOM05D008601 ORTHO05D010814 2.6e-07 57.4 32 81.2
Nn3g19077 Nelumbo nucifera HOM05D008601 ORTHO05D010814 2.6e-07 57.4 31 90.3
PSO548G0030 Papaver somniferum HOM05D008601 ORTHO05D010814 2.6e-07 57.4 31 87.1
BolC9t58297H Brassica oleracea HOM05D008601 ORTHO05D010814 3.4e-07 57.0 33 81.8
Solyc07g024040.2 Solanum lycopersicum HOM05D008601 ORTHO05D010814 4.4e-07 56.6 32 84.4
BolSC49t61184H Brassica oleracea HOM05D008601 ORTHO05D010814 1.3e-06 55.1 32 78.1
CAN.G212.8 Capsicum annuum HOM05D008601 ORTHO05D010814 1.7e-06 54.7 32 78.1
Gohir.1Z050366 Gossypium hirsutum HOM05D008601 ORTHO05D010814 2.2e-06 54.3 33 81.8
Gohir.A07G163663 Gossypium hirsutum HOM05D008601 ORTHO05D010814 2.2e-06 54.3 33 81.8
Gohir.D06G120350 Gossypium hirsutum HOM05D008601 ORTHO05D010814 2.2e-06 54.3 33 81.8
BolSC46t60999H Brassica oleracea HOM05D008601 ORTHO05D010814 2.9e-06 53.9 32 75.0
BolSC46t61036H Brassica oleracea HOM05D008601 ORTHO05D010814 2.9e-06 53.9 32 75.0
DCAR_032494 Daucus carota HOM05D008601 ORTHO05D010814 4.9e-06 53.1 30 80.0
Gorai.004G112900 Gossypium raimondii HOM05D008601 ORTHO05D010814 6.4e-06 52.8 32 78.1


User provided reference genes

Program Settings