Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.14G162600 Glycine max HOM05D003443 ORTHO05D008640 3.4e-74 281.6 141 100.0
VMungo0647G0179 Vigna mungo HOM05D003443 ORTHO05D008640 5.8e-58 227.6 143 83.2
Medtr5g058660 Medicago truncatula HOM05D003443 ORTHO05D008640 2.1e-44 182.6 140 71.4
Medtr5g059030 Medicago truncatula HOM05D003443 ORTHO05D008640 2.1e-44 182.6 140 71.4
Ca_26970_v3 Cicer arietinum L. HOM05D003443 ORTHO05D008640 4.8e-44 181.4 146 70.5
Phvul.008G165400 Phaseolus vulgaris HOM05D003443 ORTHO05D008640 2.0e-42 176.0 143 69.2
Psat2g087720 Pisum sativum HOM05D003443 ORTHO05D008640 2.9e-41 172.2 142 67.6
Lalb_Chr10g0101911 Lupinus albus HOM05D003443 ORTHO05D008640 1.9e-40 169.5 137 68.6
Lj1g0013808 Lotus japonicus HOM05D003443 ORTHO05D008640 6.0e-39 164.5 146 65.8
Dinv40389 Davidia involucrata HOM05D003443 ORTHO05D008640 4.3e-37 158.3 140 60.7
arahy.Tifrunner.gnm1.ann1.ZIXY5S Arachis hypogaea HOM05D003443 ORTHO05D008640 1.6e-36 156.4 140 62.9
arahy.Tifrunner.gnm1.ann1.B00VWE Arachis hypogaea HOM05D003443 ORTHO05D008640 4.8e-36 154.8 142 62.0
CiPaw.05G224500 Carya illinoinensis HOM05D003443 ORTHO05D008640 1.8e-35 152.9 130 63.1
Actinidia23064 Actinidia chinensis HOM05D003443 ORTHO05D008640 4.1e-35 151.8 142 59.2
Thecc.08G121300 Theobroma cacao HOM05D003443 ORTHO05D008640 4.1e-35 151.8 130 64.6
GSVIVG01008902001 Vitis vinifera HOM05D003443 ORTHO05D008640 5.3e-35 151.4 126 61.9
CSS0034050 Camellia sinensis var. sinensis HOM05D003443 ORTHO05D008640 9.0e-35 150.6 138 58.7
Atru.chr13.1408 Acer truncatum HOM05D003443 ORTHO05D008640 2.6e-34 149.1 128 64.1
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 2.6e-34 149.1 133 63.2
Manes.18G075200 Manihot esculenta HOM05D003443 ORTHO05D008640 3.4e-34 148.7 136 58.8
QL08p024382 Quercus lobata HOM05D003443 ORTHO05D008640 3.4e-34 148.7 128 62.5
Hma1.2p1_0073F.1_g038390 Hydrangea macrophylla HOM05D003443 ORTHO05D008640 7.6e-34 147.5 128 59.4
Sabra02G0067600 Salix brachista HOM05D003443 ORTHO05D008640 7.6e-34 147.5 129 62.0
Haze_00480 Corylus avellana HOM05D003443 ORTHO05D008640 1.0e-33 147.1 135 60.0
Cpa.g.sc70.11 Carica papaya HOM05D003443 ORTHO05D008640 1.3e-33 146.7 129 62.8
Potri.002G086200 Populus trichocarpa HOM05D003443 ORTHO05D008640 1.3e-33 146.7 131 61.1
Actinidia02607 Actinidia chinensis HOM05D003443 ORTHO05D008640 8.5e-33 144.1 135 59.3
Gorai.009G244100 Gossypium raimondii HOM05D003443 ORTHO05D008640 1.1e-32 143.7 128 60.9
Nn4g26023 Nelumbo nucifera HOM05D003443 ORTHO05D008640 1.1e-32 143.7 126 59.5
AT4G08240 Arabidopsis thaliana HOM05D003443 ORTHO05D008640 1.4e-32 143.3 130 58.5
Gohir.A05G233400 Gossypium hirsutum HOM05D003443 ORTHO05D008640 1.4e-32 143.3 128 60.2
Gohir.D05G235800 Gossypium hirsutum HOM05D003443 ORTHO05D008640 2.5e-32 142.5 128 60.9
FAN15G0021 Fragaria x ananassa HOM05D003443 ORTHO05D008640 5.5e-32 141.4 126 57.9
Ciclev10002759m.g Citrus clementina HOM05D003443 ORTHO05D008640 7.2e-32 141.0 130 63.1
vmacro12548 Vaccinium macrocarpon HOM05D003443 ORTHO05D008640 7.2e-32 141.0 140 55.7
FAN24G2127 Fragaria x ananassa HOM05D003443 ORTHO05D008640 1.2e-31 140.2 129 58.1
Nitab4.5_0001926g0050 Nicotiana tabacum HOM05D003443 ORTHO05D008640 1.2e-31 140.2 125 58.4
Prupe.1G501600 Prunus persica HOM05D003443 ORTHO05D008640 1.2e-31 140.2 133 57.9
RcHm_v2.0_Chr6g0295401 Rosa chinensis HOM05D003443 ORTHO05D008640 1.6e-31 139.8 126 57.1
Nitab4.5_0002883g0010 Nicotiana tabacum HOM05D003443 ORTHO05D008640 2.1e-31 139.4 125 59.2
DCAR_014106 Daucus carota HOM05D003443 ORTHO05D008640 2.7e-31 139.0 133 56.4
Rhsim06G0105400 Rhododendron simsii HOM05D003443 ORTHO05D008640 2.7e-31 139.0 153 54.9
MD15G1353300 Malus domestica HOM05D003443 ORTHO05D008640 3.6e-31 138.7 127 58.3
MD03G1200300 Malus domestica HOM05D003443 ORTHO05D008640 4.6e-31 138.3 127 58.3
Sc01g0001350 Simmondsia chinensis HOM05D003443 ORTHO05D008640 4.6e-31 138.3 131 53.4
AL6G41970 Arabidopsis lyrata HOM05D003443 ORTHO05D008640 6.1e-31 137.9 126 57.9
Carub.0006s2677 Capsella rubella HOM05D003443 ORTHO05D008640 1.0e-30 137.1 130 56.9
AUR62004720 Chenopodium quinoa HOM05D003443 ORTHO05D008640 1.3e-30 136.7 131 55.0
FvH4_2g26530 Fragaria vesca HOM05D003443 ORTHO05D008640 1.3e-30 136.7 133 56.4
SGA_v2.0_scaffold52G18981 Striga asiatica HOM05D003443 ORTHO05D008640 1.3e-30 136.7 125 57.6
Solyc11g013020.2 Solanum lycopersicum HOM05D003443 ORTHO05D008640 1.8e-30 136.3 124 59.7
CAN.G513.1 Capsicum annuum HOM05D003443 ORTHO05D008640 2.3e-30 136.0 125 56.8
Peaxi162Scf00198g00098 Petunia axillaris HOM05D003443 ORTHO05D008640 3.0e-30 135.6 125 57.6
Aa31LG9G14320 Aethionema arabicum HOM05D003443 ORTHO05D008640 3.9e-30 135.2 126 57.1
CANSAT25G1680 Cannabis sativa HOM05D003443 ORTHO05D008640 3.9e-30 135.2 132 54.5
Sp6g09810 Schrenkiella parvula HOM05D003443 ORTHO05D008640 3.9e-30 135.2 131 56.5
Peaxi162Scf00395g00717 Petunia axillaris HOM05D003443 ORTHO05D008640 5.1e-30 134.8 128 57.8
PGSC0003DMG400000906 Solanum tuberosum HOM05D003443 ORTHO05D008640 5.1e-30 134.8 124 58.9
Sopen11g007760 Solanum pennellii HOM05D003443 ORTHO05D008640 1.1e-29 133.7 124 58.9
FAN27G2419 Fragaria x ananassa HOM05D003443 ORTHO05D008640 1.5e-29 133.3 123 56.9
PSO170G0931 Papaver somniferum HOM05D003443 ORTHO05D008640 3.3e-29 132.1 139 54.7
THA.LOC104817138 Tarenaya hassleriana HOM05D003443 ORTHO05D008640 5.7e-29 131.3 129 55.8
Migut.C01148 Erythranthe guttata HOM05D003443 ORTHO05D008640 1.3e-28 130.2 125 56.0
Thhalv10029053m.g Eutrema salsugineum HOM05D003443 ORTHO05D008640 2.2e-28 129.4 131 55.0
BcaB01g02870 Brassica carinata HOM05D003443 ORTHO05D008640 4.8e-28 128.3 128 54.7
MBI06_g44272_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 6.3e-28 127.9 128 53.1
MBI15_g35999_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 6.3e-28 127.9 128 53.1
CARHR259340 Cardamine hirsuta HOM05D003443 ORTHO05D008640 8.2e-28 127.5 126 55.6
Cc10_g11000 Coffea canephora HOM05D003443 ORTHO05D008640 8.2e-28 127.5 128 55.5
CsaV3_6G003590 Cucumis sativus L. HOM05D003443 ORTHO05D008640 6.9e-27 124.4 151 45.0
MELO3C011587.2 Cucumis melo HOM05D003443 ORTHO05D008640 9.1e-27 124.0 133 48.1
SalBow7G4791 Salvia bowleyana HOM05D003443 ORTHO05D008640 1.2e-26 123.6 125 53.6
SalBow7G2413 Salvia bowleyana HOM05D003443 ORTHO05D008640 2.6e-26 122.5 125 52.8
BraA03t12014Z Brassica rapa HOM05D003443 ORTHO05D008640 1.0e-25 120.6 129 52.7
A03p27990 Brassica napus HOM05D003443 ORTHO05D008640 2.9e-25 119.0 129 51.9
HanXRQChr09g0254131 Helianthus annuus HOM05D003443 ORTHO05D008640 2.9e-25 119.0 127 48.8
BcaC01g04776 Brassica carinata HOM05D003443 ORTHO05D008640 3.8e-25 118.6 129 51.2
C03p33840 Brassica napus HOM05D003443 ORTHO05D008640 3.8e-25 118.6 129 51.2
BolC3t15700H Brassica oleracea HOM05D003443 ORTHO05D008640 3.8e-25 118.6 129 51.2
Aqoxy6G00163 Aquilegia oxysepala HOM05D003443 ORTHO05D008640 5.0e-25 118.2 148 49.3
MSTRG.1460 Avicennia marina HOM05D003443 ORTHO05D008640 8.5e-25 117.5 125 52.8
Sed0028054 Sechium edule HOM05D003443 ORTHO05D008640 2.5e-24 115.9 127 49.6
ECA232G0443 Erigeron canadensis HOM05D003443 ORTHO05D008640 3.2e-24 115.5 140 45.7
MELO3C011304.2 Cucumis melo HOM05D003443 ORTHO05D008640 4.2e-24 115.2 145 44.1
ATR0121G005 Amborella trichopoda HOM05D003443 ORTHO05D008640 1.6e-23 113.2 122 50.0
TPR.G8499 Trifolium pratense HOM05D028375 ORTHO05D008640 1.6e-23 113.2 135 49.6
Lsat_1_v5_gn_4_136221 Lactuca sativa HOM05D003443 ORTHO05D008640 2.7e-23 112.5 133 46.6
MD08G1167900 Malus domestica HOM05D003443 ORTHO05D008640 2.3e-22 109.4 131 47.3
Hund27039 Selenicereus undatus HOM05D003443 ORTHO05D008640 3.0e-22 109.0 214 35.0
HPP92_002301 Vanilla planifolia HOM05D003443 ORTHO05D008640 2.6e-21 105.9 124 49.2
AUR62023639 Chenopodium quinoa HOM05D003443 ORTHO05D008640 1.3e-20 103.6 138 43.5
unitig_747.g21488 Utricularia gibba HOM05D003443 ORTHO05D008640 4.8e-20 101.7 125 46.4
Os02g0567000 Oryza sativa ssp. japonica HOM05D003443 ORTHO05D008640 2.4e-19 99.4 142 43.7
PGR044G0044 Punica granatum HOM05D003443 ORTHO05D008640 5.3e-19 98.2 140 43.6
CDE08G0113 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 1.5e-18 96.7 110 46.4
Zm00001eb244530 Zea mays HOM05D003443 ORTHO05D008640 2.0e-18 96.3 141 41.8
CDE06G0537 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 7.7e-18 94.4 109 45.9
TAR628G1666 Trochodendron aralioides HOM05D003443 ORTHO05D008640 7.7e-18 94.4 73 64.4
Ah.16g110170 Amaranthus hybridus HOM05D003443 ORTHO05D008640 1.3e-17 93.6 70 62.9
SEGI_04119 Sequoiadendron giganteum HOM05D003443 ORTHO05D008640 1.7e-17 93.2 119 40.3
ClCG08G005410 Citrullus lanatus HOM05D003443 ORTHO05D008640 5.0e-17 91.7 209 31.1
Duzib093G0610 Durio zibethinus HOM05D003443 ORTHO05D008640 5.0e-17 91.7 132 48.5
Eucgr.L01689 Eucalyptus grandis HOM05D003443 ORTHO05D008640 2.5e-16 89.4 69 63.8
Oeu047933.1 Olea europaea HOM05D003443 ORTHO05D008640 4.2e-16 88.6 138 42.0
TWI12G0841 Tripterygium wilfordii HOM05D003443 ORTHO05D008640 1.6e-15 86.7 70 61.4
Migut.G00969 Erythranthe guttata HOM05D003443 ORTHO05D008640 3.6e-15 85.5 125 43.2
Mapoly0161s0025 Marchantia polymorpha HOM05D003443 ORTHO05D008640 1.3e-12 77.0 125 35.2
Cfa009666 Carpinus fangiana HOM05D003443 ORTHO05D008640 1.7e-12 76.6 75 57.3
TPR.G109 Trifolium pratense HOM05D003443 ORTHO05D008640 1.7e-09 66.6 52 71.2
Cpa.g.sc36.31 Carica papaya HOM05D003443 ORTHO05D008640 2.2e-09 66.2 98 43.9
SHI33895 Sapria himalayana HOM05D003443 ORTHO05D008640 7.2e-08 61.2 126 33.3
CDE11G0164 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 2.3e-06 56.2 71 45.1


User provided reference genes

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