Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.14G160851 Glycine max HOM05D005459 ORTHO05D006751 2.7e-77 292.0 152 100.0
Glyma.10G065800 Glycine max HOM05D005459 ORTHO05D006751 2.8e-74 282.0 152 96.7
TPR.G33293 Trifolium pratense HOM05D005459 ORTHO05D006751 6.7e-60 234.2 149 81.2
Medtr1g028510 Medicago truncatula HOM05D005459 ORTHO05D006751 1.5e-59 233.0 149 81.2
VMungo0647G0840 Vigna mungo HOM05D005459 ORTHO05D006751 1.9e-59 232.6 153 80.4
Lj6g0006101 Lotus japonicus HOM05D005459 ORTHO05D006751 1.3e-58 229.9 155 78.7
Ca_12679_v3 Cicer arietinum L. HOM05D005459 ORTHO05D006751 3.7e-58 228.4 150 78.0
Psat6g038640 Pisum sativum HOM05D005459 ORTHO05D006751 2.4e-57 225.7 150 76.7
Lalb_Chr10g0091331 Lupinus albus HOM05D005459 ORTHO05D006751 1.3e-55 219.9 154 76.6
Medtr7g100937 Medicago truncatula HOM05D005459 ORTHO05D006751 1.1e-54 216.9 145 78.6
arahy.Tifrunner.gnm1.ann1.7I62GA Arachis hypogaea HOM05D005459 ORTHO05D006751 4.4e-51 204.9 156 69.9
arahy.Tifrunner.gnm1.ann1.QW5IMS Arachis hypogaea HOM05D005459 ORTHO05D006751 2.8e-50 202.2 156 69.9
Phvul.001G060700 Phaseolus vulgaris HOM05D005459 ORTHO05D006751 2.1e-45 186.0 118 83.9
TWI39G1077 Tripterygium wilfordii HOM05D005459 ORTHO05D006751 7.7e-40 167.5 154 61.0
Manes.06G157100 Manihot esculenta HOM05D005459 ORTHO05D006751 1.6e-37 159.8 153 57.5
Haze_00111 Corylus avellana HOM05D005459 ORTHO05D006751 1.0e-36 157.1 153 59.5
Prupe.2G307100 Prunus persica HOM05D005459 ORTHO05D006751 1.2e-35 153.7 150 58.0
QL09p010988 Quercus lobata HOM05D005459 ORTHO05D006751 4.4e-35 151.8 152 57.9
GSVIVG01028720001 Vitis vinifera HOM05D005459 ORTHO05D006751 1.3e-34 150.2 153 54.9
COL.COLO4_35657 Corchorus olitorius HOM05D005459 ORTHO05D006751 3.7e-34 148.7 150 54.0
Ciclev10007115m.g Citrus clementina HOM05D005459 ORTHO05D006751 4.8e-34 148.3 149 55.0
Potri.015G022400 Populus trichocarpa HOM05D005459 ORTHO05D006751 3.1e-33 145.6 150 55.3
Cfa016362 Carpinus fangiana HOM05D005459 ORTHO05D006751 4.1e-33 145.2 153 56.9
Thecc.03G192700 Theobroma cacao HOM05D005459 ORTHO05D006751 9.1e-33 144.1 150 53.3
PGR142G2821 Punica granatum HOM05D005459 ORTHO05D006751 3.5e-32 142.1 150 52.0
Cpa.g.sc3.50 Carica papaya HOM05D005459 ORTHO05D006751 4.5e-32 141.7 150 54.7
CANSAT64G0927 Cannabis sativa HOM05D005459 ORTHO05D006751 1.7e-31 139.8 155 55.5
Gohir.D12G252700 Gossypium hirsutum HOM05D005459 ORTHO05D006751 3.8e-31 138.7 150 51.3
Gohir.D12G253700 Gossypium hirsutum HOM05D005459 ORTHO05D006751 3.8e-31 138.7 150 51.3
Gorai.008G270800 Gossypium raimondii HOM05D005459 ORTHO05D006751 3.8e-31 138.7 150 51.3
Dinv28337 Davidia involucrata HOM05D005459 ORTHO05D006751 5.0e-31 138.3 149 53.7
MD07G1285000 Malus domestica HOM05D005459 ORTHO05D006751 5.0e-31 138.3 150 51.3
CSS0021725 Camellia sinensis var. sinensis HOM05D005459 ORTHO05D006751 1.5e-30 136.7 165 49.1
Eucgr.K00329 Eucalyptus grandis HOM05D005459 ORTHO05D006751 1.5e-30 136.7 153 49.7
Sabra15G0016700 Salix brachista HOM05D005459 ORTHO05D006751 1.5e-30 136.7 150 52.0
FvH4_7g31010 Fragaria vesca HOM05D005459 ORTHO05D006751 2.5e-30 136.0 153 49.0
FAN06G0889 Fragaria x ananassa HOM05D005459 ORTHO05D006751 2.5e-30 136.0 153 49.0
FAN06G3802 Fragaria x ananassa HOM05D005459 ORTHO05D006751 2.5e-30 136.0 153 49.0
Duzib084G0355 Durio zibethinus HOM05D005459 ORTHO05D006751 3.2e-30 135.6 150 51.3
Rhsim09G0203700 Rhododendron simsii HOM05D005459 ORTHO05D006751 3.2e-30 135.6 146 54.1
vmacro10106 Vaccinium macrocarpon HOM05D005459 ORTHO05D006751 5.5e-30 134.8 146 53.4
FAN10G1158 Fragaria x ananassa HOM05D005459 ORTHO05D006751 2.1e-29 132.9 153 48.4
FAN10G1104 Fragaria x ananassa HOM05D005459 ORTHO05D006751 2.7e-29 132.5 152 48.0
Nn3g17990 Nelumbo nucifera HOM05D005459 ORTHO05D006751 2.7e-29 132.5 152 48.7
RcHm_v2.0_Chr1g0380091 Rosa chinensis HOM05D005459 ORTHO05D006751 3.6e-29 132.1 150 49.3
TAR629G0715 Trochodendron aralioides HOM05D005459 ORTHO05D006751 3.0e-28 129.0 149 48.3
FAN01G1429 Fragaria x ananassa HOM05D005459 ORTHO05D006751 4.0e-28 128.6 153 47.1
Sed0000581 Sechium edule HOM05D005459 ORTHO05D006751 9.8e-27 124.0 150 48.7
Hma1.2p1_0327F.1_g126730 Hydrangea macrophylla HOM05D005459 ORTHO05D006751 1.3e-26 123.6 148 51.4
ClCG05G008710 Citrullus lanatus HOM05D005459 ORTHO05D006751 6.3e-26 121.3 153 46.4
Lj3C911T3 Lonicera japonica HOM05D005459 ORTHO05D006751 8.3e-26 120.9 146 47.9
DCAR_024416 Daucus carota HOM05D005459 ORTHO05D006751 1.4e-25 120.2 150 49.3
CiPaw.06G007500 Carya illinoinensis HOM05D005459 ORTHO05D006751 3.1e-25 119.0 119 58.8
Sc13g0009600 Simmondsia chinensis HOM05D005459 ORTHO05D006751 4.1e-25 118.6 151 47.0
MBI06_g32757_MAGBIO Magnolia biondii HOM05D005459 ORTHO05D006751 7.0e-25 117.9 151 44.4
CsaV3_3G021950 Cucumis sativus L. HOM05D005459 ORTHO05D006751 9.1e-25 117.5 141 51.1
Peaxi162Scf00618g00514 Petunia axillaris HOM05D005459 ORTHO05D006751 9.1e-25 117.5 148 45.9
HanXRQChr14g0462841 Helianthus annuus HOM05D005459 ORTHO05D006751 3.5e-24 115.5 147 46.3
Nitab4.5_0004934g0010 Nicotiana tabacum HOM05D005459 ORTHO05D006751 1.0e-23 114.0 146 45.2
EL10Ac3g05347 Beta vulgaris HOM05D005459 ORTHO05D006751 1.3e-23 113.6 149 43.0
AUR62006152 Chenopodium quinoa HOM05D005459 ORTHO05D006751 1.3e-23 113.6 176 42.0
Atru.chr1.246 Acer truncatum HOM05D005459 ORTHO05D006751 1.7e-23 113.2 87 65.5
THA.LOC104813180 Tarenaya hassleriana HOM05D005459 ORTHO05D006751 2.9e-23 112.5 146 47.3
Cc02_g01880 Coffea canephora HOM05D005459 ORTHO05D006751 5.0e-23 111.7 160 45.0
BolC7t43505H Brassica oleracea HOM05D005459 ORTHO05D006751 1.5e-22 110.2 148 47.3
A06p46000 Brassica napus HOM05D005459 ORTHO05D006751 1.9e-22 109.8 148 45.9
BraA06t27464Z Brassica rapa HOM05D005459 ORTHO05D006751 1.9e-22 109.8 148 45.9
PSO135G0062 Papaver somniferum HOM05D005459 ORTHO05D006751 1.9e-22 109.8 150 42.7
C07p29540 Brassica napus HOM05D005459 ORTHO05D006751 3.2e-22 109.0 148 49.3
ECA246G1562 Erigeron canadensis HOM05D005459 ORTHO05D006751 4.2e-22 108.6 135 45.9
CAN.G394.13 Capsicum annuum HOM05D005459 ORTHO05D006751 5.5e-22 108.2 149 41.6
Ah.13g069840 Amaranthus hybridus HOM05D005459 ORTHO05D006751 7.2e-22 107.8 154 42.9
BcaC06g31482 Brassica carinata HOM05D005459 ORTHO05D006751 7.2e-22 107.8 147 46.3
PGSC0003DMG400002352 Solanum tuberosum HOM05D005459 ORTHO05D006751 7.2e-22 107.8 149 42.3
Aqoxy7G00148 Aquilegia oxysepala HOM05D005459 ORTHO05D006751 1.2e-21 107.1 148 42.6
CAN.G589.10 Capsicum annuum HOM05D005459 ORTHO05D006751 2.1e-21 106.3 149 43.0
AUR62019336 Chenopodium quinoa HOM05D005459 ORTHO05D006751 2.1e-21 106.3 176 40.3
SHI02435 Sapria himalayana HOM05D005459 ORTHO05D006751 2.1e-21 106.3 149 41.6
PSO384G0956 Papaver somniferum HOM05D005459 ORTHO05D006751 2.8e-21 105.9 151 42.4
Migut.F01051 Erythranthe guttata HOM05D005459 ORTHO05D006751 3.6e-21 105.5 153 42.5
ATR0661G386 Amborella trichopoda HOM05D005459 ORTHO05D006751 6.1e-21 104.8 150 43.3
AT5G41480 Arabidopsis thaliana HOM05D005459 ORTHO05D006751 6.1e-21 104.8 148 44.6
vmacro20553 Vaccinium macrocarpon HOM05D005459 ORTHO05D006751 1.0e-20 104.0 108 51.9
Hund04829 Selenicereus undatus HOM05D005459 ORTHO05D006751 1.4e-20 103.6 174 40.2
Solyc06g051900.3 Solanum lycopersicum HOM05D005459 ORTHO05D006751 1.4e-20 103.6 148 41.9
HPP92_026772 Vanilla planifolia HOM05D005459 ORTHO05D006751 1.8e-20 103.2 153 37.9
Sopen06g017930 Solanum pennellii HOM05D005459 ORTHO05D006751 2.3e-20 102.8 149 41.6
CDE02G4072 Ceratophyllum demersum HOM05D005459 ORTHO05D006751 5.2e-20 101.7 149 40.3
SGA_v2.0_scaffold55G19735 Striga asiatica HOM05D005459 ORTHO05D006751 6.8e-20 101.3 157 41.4
unitig_578.g16671 Utricularia gibba HOM05D005459 ORTHO05D006751 6.8e-20 101.3 150 39.3
AL7G47930 Arabidopsis lyrata HOM05D005459 ORTHO05D006751 2.6e-19 99.4 148 43.9
SalBow2G0671 Salvia bowleyana HOM05D005459 ORTHO05D006751 4.4e-19 98.6 150 40.7
Sp7g00510 Schrenkiella parvula HOM05D005459 ORTHO05D006751 4.4e-19 98.6 148 45.3
Carub.0007s3402 Capsella rubella HOM05D005459 ORTHO05D006751 7.5e-19 97.8 148 42.6
Hma1.2p1_0327F.1_g126720 Hydrangea macrophylla HOM05D005459 ORTHO05D006751 7.5e-19 97.8 81 61.7
FAN03G0338 Fragaria x ananassa HOM05D005459 ORTHO05D006751 1.7e-18 96.7 153 39.9
Thhalv10027718m.g Eutrema salsugineum HOM05D005459 ORTHO05D006751 6.3e-18 94.7 148 42.6
Lsat_1_v5_gn_2_134221 Lactuca sativa HOM05D005459 ORTHO05D006751 4.1e-17 92.0 150 41.3
Aa31LG9G520 Aethionema arabicum HOM05D005459 ORTHO05D006751 2.7e-16 89.4 147 38.1
Zm00001eb410070 Zea mays HOM05D005459 ORTHO05D006751 1.0e-15 87.4 156 36.5
Os12g0623800 Oryza sativa ssp. japonica HOM05D005459 ORTHO05D006751 3.8e-15 85.5 153 35.9
SEGI_13502 Sequoiadendron giganteum HOM05D005459 ORTHO05D006751 6.1e-13 78.2 151 33.8
Mapoly0084s0006 Marchantia polymorpha HOM05D005459 ORTHO05D006751 9.8e-11 70.9 145 34.5
Actinidia31865 Actinidia chinensis HOM05D005459 ORTHO05D006751 9.2e-09 64.3 90 41.1
Pp3c1_19310 Physcomitrium patens HOM05D005459 ORTHO05D006751 1.6e-08 63.5 161 29.2
Dinv35306 Davidia involucrata HOM05D005459 ORTHO05D006751 2.0e-08 63.2 119 37.8
Actinidia03157 Actinidia chinensis HOM05D005459 ORTHO05D006751 3.3e-06 55.8 40 70.0
CARHR213570 Cardamine hirsuta HOM05D005459 ORTHO05D006751 4.3e-06 55.5 48 60.4


User provided reference genes

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