Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.14G150500 Glycine max HOM05D007582 ORTHO05D009645 9.5e-67 256.5 115 100.0
VMungo0647G1492 Vigna mungo HOM05D007582 ORTHO05D009645 3.1e-49 198.4 115 77.4
Phvul.008G160900 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 4.4e-48 194.5 115 78.3
Phvul.008G167875 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 4.4e-48 194.5 115 78.3
Lalb_Chr17g0343701 Lupinus albus HOM05D007582 ORTHO05D009645 2.8e-42 175.3 115 67.8
Lj1g0018777 Lotus japonicus HOM05D007582 ORTHO05D009645 4.5e-40 167.9 115 65.2
Manes.18G077606 Manihot esculenta HOM05D007582 ORTHO05D009645 4.5e-40 167.9 115 64.3
Medtr1g029990 Medicago truncatula HOM05D007582 ORTHO05D009645 4.5e-40 167.9 115 65.2
Thecc.08G126100 Theobroma cacao HOM05D007582 ORTHO05D009645 9.9e-40 166.8 116 66.4
Duzib116G0545 Durio zibethinus HOM05D007582 ORTHO05D009645 2.9e-39 165.2 115 61.7
TPR.G25776 Trifolium pratense HOM05D007582 ORTHO05D009645 3.8e-39 164.9 115 63.5
Cpa.g.sc64.90 Carica papaya HOM05D007582 ORTHO05D009645 1.9e-38 162.5 115 61.7
Solyc06g060300.1 Solanum lycopersicum HOM05D007582 ORTHO05D009645 3.2e-38 161.8 115 61.7
Atru.chr13.1488 Acer truncatum HOM05D007582 ORTHO05D009645 4.2e-38 161.4 115 63.5
Sc22g0004000 Simmondsia chinensis HOM05D007582 ORTHO05D009645 4.2e-38 161.4 115 62.6
CAN.G1040.1 Capsicum annuum HOM05D007582 ORTHO05D009645 5.5e-38 161.0 115 62.6
TWI34G1919 Tripterygium wilfordii HOM05D007582 ORTHO05D009645 7.1e-38 160.6 115 63.5
RcHm_v2.0_Chr6g0295891 Rosa chinensis HOM05D007582 ORTHO05D009645 9.3e-38 160.2 115 60.9
Sopen06g020420 Solanum pennellii HOM05D007582 ORTHO05D009645 1.2e-37 159.8 115 60.9
PGSC0003DMG400041136 Solanum tuberosum HOM05D007582 ORTHO05D009645 1.2e-37 159.8 115 61.7
MD15G1347500 Malus domestica HOM05D007582 ORTHO05D009645 2.7e-37 158.7 112 60.7
CAN.G1040.3 Capsicum annuum HOM05D007582 ORTHO05D009645 4.6e-37 157.9 115 61.7
Potri.002G083100 Populus trichocarpa HOM05D007582 ORTHO05D009645 4.6e-37 157.9 115 57.4
ClCG08G005690 Citrullus lanatus HOM05D007582 ORTHO05D009645 6.0e-37 157.5 115 60.9
FAN15G1067 Fragaria x ananassa HOM05D007582 ORTHO05D009645 6.0e-37 157.5 115 61.7
QL09p034466 Quercus lobata HOM05D007582 ORTHO05D009645 7.9e-37 157.1 114 59.6
CANSAT11G2348 Cannabis sativa HOM05D007582 ORTHO05D009645 1.3e-36 156.4 117 59.8
Oeu028565.1 Olea europaea HOM05D007582 ORTHO05D009645 1.3e-36 156.4 116 63.8
Prupe.1G495300 Prunus persica HOM05D007582 ORTHO05D009645 1.3e-36 156.4 115 57.4
Manes.02G163800 Manihot esculenta HOM05D007582 ORTHO05D009645 2.3e-36 155.6 115 58.3
CiPaw.05G221000 Carya illinoinensis HOM05D007582 ORTHO05D009645 3.0e-36 155.2 115 61.7
MELO3C010615.2 Cucumis melo HOM05D007582 ORTHO05D009645 1.5e-35 152.9 115 60.9
THA.LOC104817375 Tarenaya hassleriana HOM05D007582 ORTHO05D009645 1.9e-35 152.5 115 64.3
MSTRG.22408 Avicennia marina HOM05D007582 ORTHO05D009645 2.5e-35 152.1 115 61.7
Haze_00435 Corylus avellana HOM05D007582 ORTHO05D009645 4.3e-35 151.4 115 60.0
Cc10_g11990 Coffea canephora HOM05D007582 ORTHO05D009645 5.6e-35 151.0 116 58.6
Peaxi162Scf00051g00105 Petunia axillaris HOM05D007582 ORTHO05D009645 5.6e-35 151.0 111 60.4
Carub.0001s3518 Capsella rubella HOM05D007582 ORTHO05D009645 7.4e-35 150.6 115 60.9
Gohir.D06G045500 Gossypium hirsutum HOM05D007582 ORTHO05D009645 7.4e-35 150.6 105 66.7
Nitab4.5_0003719g0010 Nicotiana tabacum HOM05D007582 ORTHO05D009645 1.3e-34 149.8 115 58.3
RhsimUnG0092400 Rhododendron simsii HOM05D007582 ORTHO05D009645 1.3e-34 149.8 121 56.2
AT1G44414 Arabidopsis thaliana HOM05D007582 ORTHO05D009645 1.6e-34 149.4 115 60.9
TAR381G0802 Trochodendron aralioides HOM05D007582 ORTHO05D009645 2.1e-34 149.1 115 57.4
AL1G52300 Arabidopsis lyrata HOM05D007582 ORTHO05D009645 2.8e-34 148.7 115 60.0
Thhalv10012348m.g Eutrema salsugineum HOM05D007582 ORTHO05D009645 2.8e-34 148.7 115 60.0
SGA_v2.0_scaffold28G11996 Striga asiatica HOM05D007582 ORTHO05D009645 2.8e-34 148.7 115 60.9
Aa31LG6G9350 Aethionema arabicum HOM05D007582 ORTHO05D009645 3.7e-34 148.3 115 60.0
Gorai.010G050500 Gossypium raimondii HOM05D007582 ORTHO05D009645 3.7e-34 148.3 105 65.7
Nn5g28305 Nelumbo nucifera HOM05D007582 ORTHO05D009645 4.8e-34 147.9 115 56.5
Dinv07214 Davidia involucrata HOM05D007582 ORTHO05D009645 1.1e-33 146.7 118 55.9
Lj4P628T29 Lonicera japonica HOM05D007582 ORTHO05D009645 1.8e-33 146.0 115 59.1
BcaB07g33949 Brassica carinata HOM05D007582 ORTHO05D009645 3.1e-33 145.2 115 60.0
CDE06G0523 Ceratophyllum demersum HOM05D007582 ORTHO05D009645 5.3e-33 144.4 115 54.8
Sp1g33530 Schrenkiella parvula HOM05D007582 ORTHO05D009645 5.3e-33 144.4 115 59.1
vmacro00836 Vaccinium macrocarpon HOM05D007582 ORTHO05D009645 5.3e-33 144.4 119 54.6
Migut.N03282 Erythranthe guttata HOM05D007582 ORTHO05D009645 9.0e-33 143.7 115 60.0
PGR042G2864 Punica granatum HOM05D007582 ORTHO05D009645 9.0e-33 143.7 114 56.1
CSS0038396 Camellia sinensis var. sinensis HOM05D007582 ORTHO05D009645 1.2e-32 143.3 120 53.3
CARHR035920 Cardamine hirsuta HOM05D007582 ORTHO05D009645 1.2e-32 143.3 115 58.3
Aqoxy6G00171 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 1.5e-32 142.9 115 55.7
BolC6t35199H Brassica oleracea HOM05D007582 ORTHO05D009645 3.4e-32 141.7 115 60.0
SHI08583 Sapria himalayana HOM05D007582 ORTHO05D009645 4.5e-32 141.4 114 52.6
A06p11790 Brassica napus HOM05D007582 ORTHO05D009645 5.8e-32 141.0 115 59.1
SalBow6G5334 Salvia bowleyana HOM05D007582 ORTHO05D009645 5.8e-32 141.0 115 58.3
Psat6g041680 Pisum sativum HOM05D007582 ORTHO05D009139 7.6e-32 140.6 101 63.4
Nn1g00264 Nelumbo nucifera HOM05D007582 ORTHO05D009645 1.7e-31 139.4 116 53.4
PSO528G0093 Papaver somniferum HOM05D007582 ORTHO05D009645 1.7e-31 139.4 115 58.3
BcaC08g42847 Brassica carinata HOM05D007582 ORTHO05D009645 2.9e-31 138.7 115 59.1
C06p00630 Brassica napus HOM05D007582 ORTHO05D009645 2.9e-31 138.7 115 59.1
Ciclev10002916m.g Citrus clementina HOM05D007582 ORTHO05D009645 4.9e-31 137.9 115 55.7
PSO170G1805 Papaver somniferum HOM05D007582 ORTHO05D009645 1.1e-30 136.7 115 56.5
Hma1.2p1_0054F.1_g031010 Hydrangea macrophylla HOM05D007582 ORTHO05D009645 1.9e-30 136.0 115 54.8
ATR0584G060 Amborella trichopoda HOM05D007582 ORTHO05D009645 4.2e-30 134.8 115 49.6
DCAR_016167 Daucus carota HOM05D007582 ORTHO05D009645 5.5e-30 134.4 115 54.8
CsaV3_6G034440 Cucumis sativus L. HOM05D007582 ORTHO05D009645 9.3e-30 133.7 106 56.6
HanXRQChr15g0465231 Helianthus annuus HOM05D007582 ORTHO05D009645 1.2e-29 133.3 115 54.8
arahy.Tifrunner.gnm1.ann1.WSBZ3R Arachis hypogaea HOM05D007582 ORTHO05D009645 2.7e-29 132.1 100 64.0
Aqoxy6G00227 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 7.9e-29 130.6 108 53.7
HPP92_006841 Vanilla planifolia HOM05D007582 ORTHO05D009645 6.7e-28 127.5 122 50.0
Gohir.A06G045000 Gossypium hirsutum HOM05D007582 ORTHO05D009645 1.5e-27 126.3 91 63.7
Sed0002225 Sechium edule HOM05D007582 ORTHO05D009645 9.6e-27 123.6 115 48.7
Zm00001eb348620 Zea mays HOM05D007582 ORTHO05D009645 1.1e-25 120.2 115 50.4
ECA233G1368 Erigeron canadensis HOM05D007582 ORTHO05D009645 7.6e-24 114.0 109 50.5
Os05g0435400 Oryza sativa ssp. japonica HOM05D007582 ORTHO05D009645 2.1e-21 105.9 116 49.1
SMO143G0209 Selaginella moellendorffii HOM05D007582 ORTHO05D009645 6.1e-21 104.4 114 43.9
Nn3g18690 Nelumbo nucifera HOM05D007582 ORTHO05D009645 2.3e-20 102.4 114 43.0
Nitab4.5_0011334g0030 Nicotiana tabacum HOM05D007582 ORTHO05D009645 1.4e-17 93.2 83 53.0
Mapoly0085s0071 Marchantia polymorpha HOM05D007582 ORTHO05D009645 1.8e-17 92.8 120 39.2
Nn4g24512 Nelumbo nucifera HOM05D007582 ORTHO05D009645 2.0e-16 89.4 73 52.1
Pp3c19_19360 Physcomitrium patens HOM05D007582 ORTHO05D009645 1.7e-15 86.3 121 38.0
Phvul.L001669 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 1.1e-11 73.6 43 81.4
Aa31LG6G9370 Aethionema arabicum HOM05D007582 ORTHO05D009645 5.9e-08 61.2 115 34.8
AagrBONN_evm.TU.Sc2ySwM_362.1959 Anthoceros agrestis HOM05D007582 ORTHO05D009645 1.3e-07 60.1 70 41.4
AagrBONN_evm.TU.Sc2ySwM_362.2461 Anthoceros agrestis HOM05D007582 ORTHO05D009645 6.5e-07 57.8 66 37.9


User provided reference genes

Program Settings