Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.14G150400 Glycine max HOM05D006088 ORTHO05D007281 3.2e-192 674.9 328 100.0
Glyma.13G078800 Glycine max HOM05D006088 ORTHO05D007281 1.3e-177 626.3 328 93.0
Phvul.001G074500 Phaseolus vulgaris HOM05D006088 ORTHO05D007281 2.0e-170 602.4 328 89.6
Ca_12770_v3 Cicer arietinum L. HOM05D006088 ORTHO05D007281 3.0e-150 535.4 328 78.4
TPR.G24535 Trifolium pratense HOM05D006088 ORTHO05D007281 2.6e-149 532.3 328 79.3
Lj5g0026434 Lotus japonicus HOM05D006088 ORTHO05D007281 2.0e-146 522.7 337 75.4
Lalb_Chr04g0253281 Lupinus albus HOM05D006088 ORTHO05D007281 7.5e-141 504.2 325 76.3
arahy.Tifrunner.gnm1.ann1.F1TPPK Arachis hypogaea HOM05D006088 ORTHO05D007281 5.6e-136 488.0 340 71.2
arahy.Tifrunner.gnm1.ann1.W8KES2 Arachis hypogaea HOM05D006088 ORTHO05D007281 4.0e-134 481.9 328 72.0
Dinv29251 Davidia involucrata HOM05D006088 ORTHO05D007281 2.0e-130 469.5 327 69.4
Psat6g035960 Pisum sativum HOM05D006088 ORTHO05D007281 9.5e-128 460.7 308 74.7
Rhsim03G0211500 Rhododendron simsii HOM05D006088 ORTHO05D007281 9.5e-128 460.7 325 69.2
QL09p007776 Quercus lobata HOM05D006088 ORTHO05D007281 1.4e-126 456.8 327 69.1
Actinidia34240 Actinidia chinensis HOM05D006088 ORTHO05D007281 2.2e-124 449.5 327 67.0
Thecc.03G202800 Theobroma cacao HOM05D006088 ORTHO05D007281 1.1e-123 447.2 327 66.7
Potri.015G009500 Populus trichocarpa HOM05D006088 ORTHO05D007281 1.9e-123 446.4 327 64.8
Cpa.g.sc3.114 Carica papaya HOM05D006088 ORTHO05D007281 3.2e-123 445.7 325 67.7
Duzib068G0049 Durio zibethinus HOM05D006088 ORTHO05D007281 5.4e-123 444.9 327 68.2
Lj1A1022T49 Lonicera japonica HOM05D006088 ORTHO05D007281 1.2e-122 443.7 325 66.2
PGR042G2967 Punica granatum HOM05D006088 ORTHO05D007281 6.0e-122 441.4 326 66.9
CSS0044490 Camellia sinensis var. sinensis HOM05D006088 ORTHO05D007281 8.6e-121 437.6 327 65.1
Atru.chr12.2268 Acer truncatum HOM05D006088 ORTHO05D007281 1.5e-120 436.8 327 65.7
Sabra15G0007500 Salix brachista HOM05D006088 ORTHO05D007281 1.9e-120 436.4 327 64.5
Atru.chr12.2276 Acer truncatum HOM05D006088 ORTHO05D007281 2.5e-120 436.0 327 65.4
MD07G1295100 Malus domestica HOM05D006088 ORTHO05D007281 1.2e-119 433.7 328 65.9
AUR62035569 Chenopodium quinoa HOM05D006088 ORTHO05D007281 2.8e-119 432.6 330 64.5
PSO063G3091 Papaver somniferum HOM05D006088 ORTHO05D007281 2.8e-119 432.6 327 65.7
vmacro06404 Vaccinium macrocarpon HOM05D006088 ORTHO05D007281 2.8e-119 432.6 370 59.7
EL10Ac3g05241 Beta vulgaris HOM05D006088 ORTHO05D007281 3.6e-119 432.2 328 63.7
Eucgr.A01442 Eucalyptus grandis HOM05D006088 ORTHO05D007281 3.6e-119 432.2 327 65.7
Gohir.D09G180600 Gossypium hirsutum HOM05D006088 ORTHO05D007281 8.1e-119 431.0 327 64.5
Prupe.2G314700 Prunus persica HOM05D006088 ORTHO05D007281 8.1e-119 431.0 331 66.2
Gohir.A09G186501 Gossypium hirsutum HOM05D006088 ORTHO05D007281 1.8e-118 429.9 327 64.5
CANSAT21G0843 Cannabis sativa HOM05D006088 ORTHO05D007281 3.1e-118 429.1 327 62.7
TAR629G2736 Trochodendron aralioides HOM05D006088 ORTHO05D007281 1.2e-117 427.2 328 62.8
COL.COLO4_16809 Corchorus olitorius HOM05D006088 ORTHO05D007281 4.4e-117 425.2 327 65.1
RcHm_v2.0_Chr1g0381781 Rosa chinensis HOM05D006088 ORTHO05D007281 7.5e-117 424.5 328 64.6
THA.LOC104814937 Tarenaya hassleriana HOM05D006088 ORTHO05D007281 2.9e-116 422.5 327 63.0
Hma1.2p1_0707F.1_g207070 Hydrangea macrophylla HOM05D006088 ORTHO05D007281 3.7e-116 422.2 307 67.1
Sed0011789 Sechium edule HOM05D006088 ORTHO05D007281 2.4e-115 419.5 328 63.4
FAN03G2371 Fragaria x ananassa HOM05D006088 ORTHO05D007281 3.2e-115 419.1 329 64.4
FAN03G2860 Fragaria x ananassa HOM05D006088 ORTHO05D007281 3.2e-115 419.1 329 64.4
Nn1g00333 Nelumbo nucifera HOM05D006088 ORTHO05D007281 7.1e-115 417.9 327 64.5
FAN01G2391 Fragaria x ananassa HOM05D006088 ORTHO05D007281 9.2e-115 417.5 329 63.8
HanXRQChr04g0100451 Helianthus annuus HOM05D006088 ORTHO05D007281 9.2e-115 417.5 329 62.0
GSVIVG01038590001 Vitis vinifera HOM05D006088 ORTHO05D007281 9.2e-115 417.5 340 62.6
FAN10G3213 Fragaria x ananassa HOM05D006088 ORTHO05D007281 1.2e-114 417.2 329 63.5
MELO3C019378.2 Cucumis melo HOM05D006088 ORTHO05D007281 2.7e-114 416.0 328 62.8
CsaV3_3G019690 Cucumis sativus L. HOM05D006088 ORTHO05D007281 2.7e-114 416.0 328 62.5
CSS0005298 Camellia sinensis var. sinensis HOM05D006088 ORTHO05D007281 6.0e-114 414.8 307 65.8
FvH4_7g32160 Fragaria vesca HOM05D006088 ORTHO05D007281 1.0e-113 414.1 329 63.2
FAN10G3559 Fragaria x ananassa HOM05D006088 ORTHO05D007281 1.0e-113 414.1 329 63.2
Oeu037044.1 Olea europaea HOM05D006088 ORTHO05D007281 1.0e-113 414.1 325 63.7
BcaC03g17984 Brassica carinata HOM05D006088 ORTHO05D007281 3.9e-113 412.1 327 62.4
Sc25g0000960 Simmondsia chinensis HOM05D006088 ORTHO05D007281 3.9e-113 412.1 325 61.2
BcaC03g17985 Brassica carinata HOM05D006088 ORTHO05D007281 6.6e-113 411.4 327 63.3
BolC2t12093H Brassica oleracea HOM05D006088 ORTHO05D007281 8.6e-113 411.0 327 62.4
Sopen03g022590 Solanum pennellii HOM05D006088 ORTHO05D007281 8.6e-113 411.0 328 64.0
A02p40650 Brassica napus HOM05D006088 ORTHO05D007281 1.5e-112 410.2 328 62.5
CAN.G481.44 Capsicum annuum HOM05D006088 ORTHO05D007281 1.9e-112 409.8 328 64.0
Nitab4.5_0002780g0060 Nicotiana tabacum HOM05D006088 ORTHO05D007281 3.3e-112 409.1 328 64.0
PGSC0003DMG400018542 Solanum tuberosum HOM05D006088 ORTHO05D007281 3.3e-112 409.1 328 63.7
FAN06G1538 Fragaria x ananassa HOM05D006088 ORTHO05D007281 4.3e-112 408.7 329 62.9
BraA02t09012Z Brassica rapa HOM05D006088 ORTHO05D007281 5.6e-112 408.3 328 61.9
Sp2g22980 Schrenkiella parvula HOM05D006088 ORTHO05D007281 1.6e-111 406.8 327 62.1
ECA238G4490 Erigeron canadensis HOM05D006088 ORTHO05D007281 2.1e-111 406.4 326 62.0
BcaB07g29905 Brassica carinata HOM05D006088 ORTHO05D007281 2.8e-111 406.0 328 62.2
Thhalv10004042m.g Eutrema salsugineum HOM05D006088 ORTHO05D007281 4.7e-111 405.2 327 62.4
SGA_v2.0_scaffold44G16827 Striga asiatica HOM05D006088 ORTHO05D007281 6.2e-111 404.8 327 61.8
TWI39G0339 Tripterygium wilfordii HOM05D006088 ORTHO05D007281 1.8e-110 403.3 327 60.9
CARHR189110 Cardamine hirsuta HOM05D006088 ORTHO05D007281 5.2e-110 401.7 327 61.5
AUR62006059 Chenopodium quinoa HOM05D006088 ORTHO05D007281 8.9e-110 401.0 314 63.1
MSTRG.27009 Avicennia marina HOM05D006088 ORTHO05D007281 4.4e-109 398.7 327 61.2
Carub.0006s2216 Capsella rubella HOM05D006088 ORTHO05D007281 1.9e-107 393.3 327 60.2
Cc02_g01220 Coffea canephora HOM05D006088 ORTHO05D007281 4.1e-107 392.1 328 62.2
AT5G24340 Arabidopsis thaliana HOM05D006088 ORTHO05D007281 5.4e-107 391.7 327 60.2
DCAR_014551 Daucus carota HOM05D006088 ORTHO05D007281 5.4e-107 391.7 325 60.6
Gorai.006G202600 Gossypium raimondii HOM05D006088 ORTHO05D007281 7.1e-107 391.3 307 63.5
vmacro06403 Vaccinium macrocarpon HOM05D006088 ORTHO05D007281 1.7e-105 386.7 310 64.2
Aa31LG11G3620 Aethionema arabicum HOM05D006088 ORTHO05D007281 3.0e-105 386.0 327 60.2
Aqoxy5G04265 Aquilegia oxysepala HOM05D006088 ORTHO05D007281 8.6e-105 384.4 325 57.5
Hund21022 Selenicereus undatus HOM05D006088 ORTHO05D007281 1.5e-104 383.6 340 57.9
Peaxi162Scf00740g00327 Petunia axillaris HOM05D006088 ORTHO05D007281 5.6e-104 381.7 307 62.9
Solyc03g082850.3 Solanum lycopersicum HOM05D006088 ORTHO05D007281 6.2e-103 378.3 316 62.0
MBI12_g21748_MAGBIO Magnolia biondii HOM05D006088 ORTHO05D007281 4.0e-102 375.6 311 58.5
unitig_52.g17713 Utricularia gibba HOM05D006088 ORTHO05D007281 1.5e-101 373.6 327 57.2
C02p60380 Brassica napus HOM05D006088 ORTHO05D007281 5.8e-101 371.7 307 60.9
BcaC03g17987 Brassica carinata HOM05D006088 ORTHO05D007281 2.4e-99 366.3 316 59.5
SalBow4G2097 Salvia bowleyana HOM05D006088 ORTHO05D007281 2.4e-99 366.3 234 74.8
HPP92_025612 Vanilla planifolia HOM05D006088 ORTHO05D007281 3.2e-99 365.9 329 54.1
Migut.F00188 Erythranthe guttata HOM05D006088 ORTHO05D007281 1.9e-96 356.7 308 57.5
arahy.Tifrunner.gnm1.ann1.IYG6N7 Arachis hypogaea HOM05D006088 ORTHO05D007281 5.3e-94 348.6 289 64.0
Os07g0452400 Oryza sativa ssp. japonica HOM05D006088 ORTHO05D007281 8.4e-92 341.3 243 67.1
Nitab4.5_0005326g0020 Nicotiana tabacum HOM05D006088 ORTHO05D007281 1.4e-91 340.5 335 55.5
Zm00001eb096690 Zea mays HOM05D006088 ORTHO05D007281 9.3e-91 337.8 327 53.5
ATR0757G203 Amborella trichopoda HOM05D006088 ORTHO05D007281 3.6e-87 325.9 331 52.3
CiPaw.06G044500 Carya illinoinensis HOM05D006088 ORTHO05D007281 5.1e-81 305.4 241 63.9
Lsat_1_v5_gn_2_135240 Lactuca sativa HOM05D006088 ORTHO05D007281 1.6e-79 300.4 327 51.4
Ca_12778_v3 Cicer arietinum L. HOM05D006088 ORTHO05D007281 1.2e-77 294.3 195 73.3
Manes.01G039200 Manihot esculenta HOM05D006088 ORTHO05D007281 5.5e-75 285.4 240 61.2
A02p40390 Brassica napus HOM05D006088 ORTHO05D007281 2.3e-73 280.0 236 61.4
arahy.Tifrunner.gnm1.ann1.GS5K3D Arachis hypogaea HOM05D006088 ORTHO05D007281 3.7e-71 272.7 284 54.6
DCAR_010586 Daucus carota HOM05D006088 ORTHO05D007281 1.5e-69 267.3 236 55.1
Ciclev10020182m.g Citrus clementina HOM05D006088 ORTHO05D007281 8.5e-68 261.5 245 57.1
CDE02G1851 Ceratophyllum demersum HOM05D006088 ORTHO05D007281 9.3e-67 258.1 330 44.8
Haze_00251 Corylus avellana HOM05D006088 ORTHO05D007281 1.5e-61 240.7 277 49.5
Haze_00245 Corylus avellana HOM05D006088 ORTHO05D007281 1.0e-60 238.0 277 49.1
AagrBONN_evm.TU.Sc2ySwM_117.2926 Anthoceros agrestis HOM05D006088 ORTHO05D007281 1.8e-57 227.3 331 36.9
Hma1.2p1_0707F.1_g207060 Hydrangea macrophylla HOM05D006088 ORTHO05D007281 3.9e-57 226.1 201 55.2
Mapoly0133s0016 Marchantia polymorpha HOM05D006088 ORTHO05D007281 4.1e-54 216.1 336 37.5
SMO266G0077 Selaginella moellendorffii HOM05D006088 ORTHO05D007281 1.0e-49 201.4 163 55.8
Pp3c11_25950 Physcomitrium patens HOM05D006088 ORTHO05D007281 3.0e-49 199.9 224 46.4
AL6G35860 Arabidopsis lyrata HOM05D006088 ORTHO05D007281 6.3e-47 192.2 213 49.3
VMungo0647G0665 Vigna mungo HOM05D006088 ORTHO05D007281 1.8e-46 190.7 89 95.5
CBR_g51519 Chara braunii HOM05D000019 ORTHO05D000353 1.1e-35 154.8 213 39.4
A02p40610 Brassica napus HOM05D006088 ORTHO05D007281 5.9e-29 132.5 157 49.7
A02p40510 Brassica napus HOM05D006088 ORTHO05D007281 1.1e-27 128.3 157 49.0
Dinv35357 Davidia involucrata HOM05D006088 ORTHO05D007281 1.2e-24 118.2 61 83.6
BraA02t09007Z Brassica rapa HOM05D006088 ORTHO05D007281 1.5e-16 91.3 110 46.4
CDE11G0933 Ceratophyllum demersum HOM05D006088 ORTHO05D007281 4.4e-16 89.7 71 62.0
A02p40600 Brassica napus HOM05D006088 ORTHO05D007281 3.0e-12 77.0 35 82.9
MCO02G089 Micromonas commoda HOM05D005361 ORTHO05D006518 1.5e-11 74.7 173 33.5
TWI14G0770 Tripterygium wilfordii HOM05D006088 ORTHO05D007281 5.6e-11 72.8 72 52.8
A02p40350 Brassica napus HOM05D006088 ORTHO05D007281 7.3e-11 72.4 125 40.8
Lsat_1_v5_gn_7_72820 Lactuca sativa HOM05D006088 ORTHO05D007281 8.0e-10 68.9 92 42.4
Cre02.g083900 Chlamydomonas reinhardtii HOM05D005361 ORTHO05D006518 1.4e-09 68.2 157 29.9


User provided reference genes

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