Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.14G148200 Glycine max HOM05D002866 ORTHO05D008929 3.6e-64 248.1 123 100.0
Glyma.06G317300 Glycine max HOM05D002866 ORTHO05D008929 9.3e-52 206.8 104 94.2
Phvul.005G009200 Phaseolus vulgaris HOM05D002866 ORTHO05D008929 5.8e-46 187.6 103 86.4
VMungo1080G1351 Vigna mungo HOM05D002866 ORTHO05D008929 4.9e-45 184.5 103 83.5
Medtr3g008180 Medicago truncatula HOM05D002866 ORTHO05D008929 9.3e-44 180.3 103 83.5
Lj3g0001933 Lotus japonicus HOM05D002866 ORTHO05D008929 1.8e-42 176.0 102 83.3
TPR.G12157 Trifolium pratense HOM05D002866 ORTHO05D008929 8.7e-42 173.7 103 80.6
arahy.Tifrunner.gnm1.ann1.DW86GH Arachis hypogaea HOM05D002866 ORTHO05D008929 1.9e-41 172.6 102 81.4
Ca_14047_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008929 3.3e-41 171.8 103 80.6
Lalb_Chr15g0079681 Lupinus albus HOM05D002866 ORTHO05D008929 7.4e-41 170.6 102 78.4
Psat5g228760 Pisum sativum HOM05D002866 ORTHO05D008929 9.6e-41 170.2 101 80.2
Gorai.008G214900 Gossypium raimondii HOM05D002866 ORTHO05D008929 9.9e-38 160.2 100 75.0
Cpa.g.sc13.272 Carica papaya HOM05D002866 ORTHO05D008929 1.7e-37 159.5 101 75.2
RcHm_v2.0_Chr1g0373871 Rosa chinensis HOM05D002866 ORTHO05D008929 4.9e-37 157.9 103 73.8
Gohir.D12G199700 Gossypium hirsutum HOM05D002866 ORTHO05D008929 6.4e-37 157.5 100 73.0
Gohir.A12G197100 Gossypium hirsutum HOM05D002866 ORTHO05D008929 1.1e-36 156.8 100 74.0
FAN03G0702 Fragaria x ananassa HOM05D002866 ORTHO05D008929 1.4e-36 156.4 103 72.8
FvH4_7g27050 Fragaria vesca HOM05D002866 ORTHO05D008929 2.4e-36 155.6 103 72.8
FAN06G4646 Fragaria x ananassa HOM05D002866 ORTHO05D008929 2.4e-36 155.6 103 72.8
Cc02_g04590 Coffea canephora HOM05D002866 ORTHO05D008929 3.2e-36 155.2 101 73.3
Duzib084G0424 Durio zibethinus HOM05D002866 ORTHO05D008929 3.2e-36 155.2 100 73.0
Oeu021694.1 Olea europaea HOM05D002866 ORTHO05D008929 3.2e-36 155.2 103 69.9
Aqoxy3G02801 Aquilegia oxysepala HOM05D002866 ORTHO05D008929 4.2e-36 154.8 100 75.0
QL05p021044 Quercus lobata HOM05D002866 ORTHO05D008929 4.2e-36 154.8 104 72.1
CiPaw.07G051200 Carya illinoinensis HOM05D002866 ORTHO05D008929 5.5e-36 154.5 101 72.3
Haze_22179 Corylus avellana HOM05D002866 ORTHO05D000055 5.5e-36 154.5 100 74.0
Lj1A976T81 Lonicera japonica HOM05D002866 ORTHO05D008929 5.5e-36 154.5 99 72.7
Ah.07g207570 Amaranthus hybridus HOM05D002866 ORTHO05D008929 9.3e-36 153.7 101 73.3
Cfa013559 Carpinus fangiana HOM05D002866 ORTHO05D008929 9.3e-36 153.7 101 73.3
FAN10G2637 Fragaria x ananassa HOM05D002866 ORTHO05D008929 9.3e-36 153.7 103 71.8
Aqoxy6G00570 Aquilegia oxysepala HOM05D002866 ORTHO05D008929 1.2e-35 153.3 100 75.0
AUR62015445 Chenopodium quinoa HOM05D002866 ORTHO05D008929 1.2e-35 153.3 99 71.7
CsaV3_4G004140 Cucumis sativus L. HOM05D002866 ORTHO05D008929 1.6e-35 152.9 100 72.0
QL05p020902 Quercus lobata HOM05D002866 ORTHO05D008929 1.6e-35 152.9 101 73.3
MBI04_g34103_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008929 2.1e-35 152.5 103 71.8
Thecc.03G150200 Theobroma cacao HOM05D002866 ORTHO05D008929 2.7e-35 152.1 101 70.3
CARHR275310 Cardamine hirsuta HOM05D002866 ORTHO05D008929 3.5e-35 151.8 89 78.7
Manes.06G132400 Manihot esculenta HOM05D002866 ORTHO05D008929 3.5e-35 151.8 103 72.8
GSVIVG01013991001 Vitis vinifera HOM05D002866 ORTHO05D008929 3.5e-35 151.8 101 72.3
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 4.6e-35 151.4 89 80.9
Prupe.2G273700 Prunus persica HOM05D002866 ORTHO05D008929 6.0e-35 151.0 103 68.9
EL10Ac3g05868 Beta vulgaris HOM05D002866 ORTHO05D008929 7.9e-35 150.6 99 70.7
Hund11848 Selenicereus undatus HOM05D002866 ORTHO05D008929 7.9e-35 150.6 101 71.3
AUR62002233 Chenopodium quinoa HOM05D002866 ORTHO05D008929 1.0e-34 150.2 99 70.7
COL.COLO4_14062 Corchorus olitorius HOM05D002866 ORTHO05D008929 1.3e-34 149.8 101 71.3
MELO3C017653.2 Cucumis melo HOM05D002866 ORTHO05D008929 1.3e-34 149.8 98 73.5
Sed0016729 Sechium edule HOM05D002866 ORTHO05D008929 1.8e-34 149.4 100 72.0
CANSAT56G0775 Cannabis sativa HOM05D002866 ORTHO05D008929 2.3e-34 149.1 100 75.0
Thhalv10004474m.g Eutrema salsugineum HOM05D002866 ORTHO05D008929 2.3e-34 149.1 91 74.7
Nn6g33860 Nelumbo nucifera HOM05D002866 ORTHO05D008929 2.3e-34 149.1 103 70.9
Carub.0008s2223 Capsella rubella HOM05D002866 ORTHO05D008929 3.0e-34 148.7 91 74.7
ClCG07G016910 Citrullus lanatus HOM05D002866 ORTHO05D008929 5.1e-34 147.9 100 71.0
HPP92_027439 Vanilla planifolia HOM05D002866 ORTHO05D008929 5.1e-34 147.9 103 69.9
Sp2g24740 Schrenkiella parvula HOM05D002866 ORTHO05D008929 6.7e-34 147.5 91 74.7
Hund11850 Selenicereus undatus HOM05D002866 ORTHO05D008929 6.7e-34 147.5 101 69.3
Sc13g0007920 Simmondsia chinensis HOM05D002866 ORTHO05D008929 6.7e-34 147.5 101 69.3
AL8G38240 Arabidopsis lyrata HOM05D002866 ORTHO05D008929 8.7e-34 147.1 91 73.6
AT5G61540 Arabidopsis thaliana HOM05D002866 ORTHO05D008929 8.7e-34 147.1 91 73.6
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 8.7e-34 147.1 89 76.4
BraA03t13840Z Brassica rapa HOM05D002866 ORTHO05D008929 8.7e-34 147.1 89 76.4
MD07G1250300 Malus domestica HOM05D002866 ORTHO05D008929 8.7e-34 147.1 103 69.9
Atru.chr1.858_Atru.chr1.859 Acer truncatum HOM05D002866 ORTHO05D008929 1.1e-33 146.7 103 68.0
PGR042G0411 Punica granatum HOM05D002866 ORTHO05D008929 1.5e-33 146.4 101 72.3
SalBow2G0523 Salvia bowleyana HOM05D002866 ORTHO05D008929 1.5e-33 146.4 104 68.3
HPP92_021029 Vanilla planifolia HOM05D002866 ORTHO05D008929 1.5e-33 146.4 103 68.9
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 1.9e-33 146.0 89 75.3
Ciclev10005302m.g Citrus clementina HOM05D002866 ORTHO05D008929 1.9e-33 146.0 102 66.7
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 2.5e-33 145.6 89 75.3
CSS0005256 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008929 5.6e-33 144.4 95 72.6
CSS0048324 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008929 5.6e-33 144.4 95 72.6
Migut.F01192 Erythranthe guttata HOM05D002866 ORTHO05D008929 7.4e-33 144.1 102 66.7
Eucgr.A02913 Eucalyptus grandis HOM05D002866 ORTHO05D008929 7.4e-33 144.1 87 78.2
SGA_v2.0_scaffold56G19920 Striga asiatica HOM05D002866 ORTHO05D008929 7.4e-33 144.1 104 64.4
vmacro22348 Vaccinium macrocarpon HOM05D002866 ORTHO05D008929 7.4e-33 144.1 88 76.1
Potri.014G191900 Populus trichocarpa HOM05D002866 ORTHO05D008929 9.6e-33 143.7 102 67.6
Lsat_1_v5_gn_2_127761 Lactuca sativa HOM05D002866 ORTHO05D008929 1.3e-32 143.3 99 68.7
HanXRQChr14g0461261 Helianthus annuus HOM05D002866 ORTHO05D008929 2.1e-32 142.5 86 76.7
Actinidia13601 Actinidia chinensis HOM05D002866 ORTHO05D008929 2.8e-32 142.1 99 67.7
ATR0767G136 Amborella trichopoda HOM05D002866 ORTHO05D008929 4.8e-32 141.4 88 73.9
PSO063G6150 Papaver somniferum HOM05D002866 ORTHO05D008929 4.8e-32 141.4 92 70.7
Rhsim03G0162900 Rhododendron simsii HOM05D002866 ORTHO05D008929 4.8e-32 141.4 88 75.0
Actinidia24979 Actinidia chinensis HOM05D002866 ORTHO05D008929 6.2e-32 141.0 88 76.1
Sabra14G0144000 Salix brachista HOM05D002866 ORTHO05D008929 6.2e-32 141.0 102 65.7
PGSC0003DMG400018851 Solanum tuberosum HOM05D002866 ORTHO05D008929 6.2e-32 141.0 89 73.0
THA.LOC104818311 Tarenaya hassleriana HOM05D002866 ORTHO05D008929 8.2e-32 140.6 89 73.0
ECA238G1321 Erigeron canadensis HOM05D002866 ORTHO05D008929 1.1e-31 140.2 86 74.4
Nitab4.5_0001267g0010 Nicotiana tabacum HOM05D002866 ORTHO05D008929 1.1e-31 140.2 89 73.0
TAR629G2248 Trochodendron aralioides HOM05D002866 ORTHO05D008929 1.1e-31 140.2 88 76.1
unitig_60.g25662 Utricularia gibba HOM05D002866 ORTHO05D008929 1.8e-31 139.4 100 66.0
CDE11G0041 Ceratophyllum demersum HOM05D002866 ORTHO05D008929 3.1e-31 138.7 100 65.0
Peaxi162Scf00271g00827 Petunia axillaris HOM05D002866 ORTHO05D008929 3.1e-31 138.7 91 69.2
Aa31LG11G1880 Aethionema arabicum HOM05D002866 ORTHO05D008929 6.9e-31 137.5 92 71.7
Nitab4.5_0002346g0020 Nicotiana tabacum HOM05D002866 ORTHO05D008929 6.9e-31 137.5 89 70.8
Solyc03g093440.4 Solanum lycopersicum HOM05D002866 ORTHO05D008929 1.2e-30 136.7 89 70.8
SEGI_24637 Sequoiadendron giganteum HOM05D002866 ORTHO05D008929 1.5e-30 136.3 89 68.5
SEGI_35611 Sequoiadendron giganteum HOM05D002866 ORTHO05D008929 1.5e-30 136.3 89 68.5
ATR0057G117 Amborella trichopoda HOM05D002866 ORTHO05D008929 3.4e-30 135.2 88 71.6
CAN.G485.17 Capsicum annuum HOM05D002866 ORTHO05D008929 4.5e-30 134.8 91 67.0
Sopen03g024270 Solanum pennellii HOM05D002866 ORTHO05D008929 4.5e-30 134.8 87 71.3
Os04g0549300 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008929 1.0e-29 133.7 86 73.3
Zm00001eb074820 Zea mays HOM05D002866 ORTHO05D008929 1.3e-29 133.3 96 68.8
TWI14G1303 Tripterygium wilfordii HOM05D002866 ORTHO05D008929 9.3e-28 127.1 102 64.7
Mapoly0043s0091 Marchantia polymorpha HOM05D002866 ORTHO05D008929 1.2e-22 110.2 88 59.1
CBR_g51802 Chara braunii HOM05D002866 ORTHO05D000301 1.5e-22 109.8 103 53.4
AagrBONN_evm.TU.Sc2ySwM_228.4013 Anthoceros agrestis HOM05D002866 ORTHO05D008929 1.3e-21 106.7 89 56.2
Pp3c27_3290 Physcomitrium patens HOM05D002866 ORTHO05D008929 3.8e-21 105.1 88 54.5
SMO115G0123 Selaginella moellendorffii HOM05D002866 ORTHO05D008929 2.7e-19 99.0 89 55.1
PRCOL_00000617 Prasinoderma coloniale HOM05D002866 ORTHO05D008929 4.8e-16 88.2 90 50.0
Haze_26420 Corylus avellana HOM05D002866 ORTHO05D008929 1.3e-13 80.1 85 49.4


User provided reference genes

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