Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.14G130350 Glycine max HOM05D008259 ORTHO05D004271 7.0e-18 92.8 44 100.0
arahy.Tifrunner.gnm1.ann1.FF8QKQ Arachis hypogaea HOM05D001966 ORTHO05D011119 3.2e-15 84.0 44 90.9
Migut.D01393 Erythranthe guttata HOM05D008259 ORTHO05D004271 5.5e-15 83.2 44 90.9
EL10Ac7g17373 Beta vulgaris HOM05D004182 ORTHO05D010127 1.6e-14 81.6 44 88.6
Ca_24280_v3 Cicer arietinum L. HOM05D004182 ORTHO05D007321 3.6e-14 80.5 43 88.4
Glyma.18G068650 Glycine max HOM05D008259 ORTHO05D004271 1.0e-13 79.0 44 81.8
Gohir.1Z049592 Gossypium hirsutum HOM05D008259 ORTHO05D004271 1.4e-13 78.6 44 86.4
Gohir.1Z050182 Gossypium hirsutum HOM05D008259 ORTHO05D004271 1.4e-13 78.6 44 86.4
Gohir.1Z050766 Gossypium hirsutum HOM05D008259 ORTHO05D004271 1.4e-13 78.6 44 86.4
Gohir.A02G134104 Gossypium hirsutum HOM05D008259 ORTHO05D004271 1.4e-13 78.6 44 86.4
Gohir.A04G039210 Gossypium hirsutum HOM05D008259 ORTHO05D004271 1.4e-13 78.6 44 86.4
Gohir.D01G169176 Gossypium hirsutum HOM05D008259 ORTHO05D004271 1.4e-13 78.6 44 86.4
Gorai.007G194600 Gossypium raimondii HOM05D008259 ORTHO05D004271 1.4e-13 78.6 44 86.4
Gohir.A01G139897 Gossypium hirsutum HOM05D008259 ORTHO05D004271 1.8e-13 78.2 44 84.1
Gohir.A05G286333 Gossypium hirsutum HOM05D008259 ORTHO05D004271 4.0e-13 77.0 44 84.1
Gohir.D08G114616 Gossypium hirsutum HOM05D008259 ORTHO05D004271 1.2e-12 75.5 44 84.1
Gohir.A12G084030 Gossypium hirsutum HOM05D008259 ORTHO05D004271 2.0e-12 74.7 44 84.1
Gohir.1Z049681 Gossypium hirsutum HOM05D008259 ORTHO05D004271 3.4e-12 73.9 44 81.8
Gohir.A06G137002 Gossypium hirsutum HOM05D008259 ORTHO05D004271 4.4e-12 73.6 44 81.8
Hma1.2p1_1135F.1_g260415 Hydrangea macrophylla HOM05D008259 ORTHO05D004271 5.7e-12 73.2 40 87.5
arahy.Tifrunner.gnm1.ann1.Y4U9X5 Arachis hypogaea HOM05D008259 ORTHO05D004271 2.8e-11 70.9 44 81.8
Gohir.A01G119750 Gossypium hirsutum HOM05D008259 ORTHO05D004271 2.8e-11 70.9 44 79.5
SalBow1G6083 Salvia bowleyana HOM05D008259 ORTHO05D013014 3.7e-11 70.5 34 91.2
Sed0020621 Sechium edule HOM05D008259 ORTHO05D004271 8.3e-11 69.3 33 93.9
Gohir.D04G151250 Gossypium hirsutum HOM05D008259 ORTHO05D004271 1.1e-10 68.9 39 79.5
Gohir.D02G151932 Gossypium hirsutum HOM05D008259 ORTHO05D004271 1.8e-10 68.2 44 75.0
Hund28446 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-10 67.8 36 88.9
Hund28585 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-10 67.8 36 88.9
Hund28944 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-10 67.8 36 88.9
Hund28949 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-10 67.8 36 88.9
Hund28959 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-10 67.8 36 88.9
Hund29107 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-10 67.8 36 88.9
Hund29184 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-10 67.8 36 88.9
Hund29242 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-10 67.8 36 88.9
Hund29271 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-10 67.8 36 88.9
Hund29275 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-10 67.8 36 88.9
Hund29279 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-10 67.8 36 88.9
Hund29283 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-10 67.8 36 88.9
Hund29451 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-10 67.8 36 88.9
Hund29497 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-10 67.8 36 88.9
Hund29785 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-10 67.8 36 88.9
Hund29912 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-10 67.8 36 88.9
Hund30004 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-10 67.8 36 88.9
Hund30064 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-10 67.8 36 88.9
Hund30203 Selenicereus undatus HOM05D008259 ORTHO05D004271 2.4e-10 67.8 36 88.9
Gorai.012G137900 Gossypium raimondii HOM05D008259 ORTHO05D004271 4.1e-10 67.0 39 79.5
Sed0008539 Sechium edule HOM05D008259 ORTHO05D013014 4.1e-10 67.0 43 72.1
Gorai.013G116300 Gossypium raimondii HOM05D008259 ORTHO05D004271 9.1e-10 65.9 44 72.7
Gohir.D13G103606 Gossypium hirsutum HOM05D008259 ORTHO05D004271 2.7e-09 64.3 44 70.5
Nitab4.5_0014528g0020 Nicotiana tabacum HOM05D008259 ORTHO05D004271 2.7e-09 64.3 38 78.9
COL.COLO4_00170 Corchorus olitorius HOM05D008259 ORTHO05D004271 3.5e-09 63.9 32 90.6
arahy.Tifrunner.gnm1.ann1.FTZ997 Arachis hypogaea HOM05D000445 ORTHO05D000314 4.5e-09 63.5 29 96.6
arahy.Tifrunner.gnm1.ann1.9V8R16 Arachis hypogaea HOM05D007464 ORTHO05D009388 1.0e-08 62.4 34 85.3
Atru.chr6.228 Acer truncatum HOM05D004182 ORTHO05D004271 1.7e-08 61.6 43 69.8
vmacro22394 Vaccinium macrocarpon HOM05D008259 ORTHO05D004271 6.5e-08 59.7 44 72.7
ClCG04G001030 Citrullus lanatus HOM05D001070 ORTHO05D002096 1.1e-07 58.9 40 72.5
VMungo0464G1082 Vigna mungo HOM05D006487 ORTHO05D007982 5.5e-07 56.6 36 77.8
VMungo0720G0997 Vigna mungo HOM05D004182 ORTHO05D007321 5.5e-07 56.6 36 77.8
Rhsim01G0285200 Rhododendron simsii HOM05D000286 ORTHO05D000170 1.2e-06 55.5 39 69.2
Dinv13700 Davidia involucrata HOM05D000001 ORTHO05D000003 2.7e-06 54.3 28 85.7
TAR636G0342 Trochodendron aralioides HOM05D001787 ORTHO05D003488 2.7e-06 54.3 26 92.3


User provided reference genes

Program Settings