Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.14G104200 Glycine max HOM05D007253 ORTHO05D009055 2.2e-83 312.4 176 100.0
Glyma.17G221800 Glycine max HOM05D007253 ORTHO05D009055 5.9e-68 261.2 178 87.6
Lj1g0002882 Lotus japonicus HOM05D007253 ORTHO05D009055 1.1e-34 150.6 144 67.4
arahy.Tifrunner.gnm1.ann1.G7TND8 Arachis hypogaea HOM05D007253 ORTHO05D009055 7.3e-34 147.9 126 73.8
arahy.Tifrunner.gnm1.ann1.2K72KI Arachis hypogaea HOM05D007253 ORTHO05D009055 1.2e-31 140.6 126 73.8
TPR.G1881 Trifolium pratense HOM05D007253 ORTHO05D009055 5.8e-31 138.3 142 65.5
arahy.Tifrunner.gnm1.ann1.LF5WZD Arachis hypogaea HOM05D007253 ORTHO05D009055 9.9e-31 137.5 108 80.6
Duzib187G0122 Durio zibethinus HOM05D007253 ORTHO05D009055 2.9e-30 136.0 103 79.6
Lalb_Chr23g0268151 Lupinus albus HOM05D007253 ORTHO05D009055 3.8e-30 135.6 103 76.7
Psat5g033080 Pisum sativum HOM05D007253 ORTHO05D009055 3.8e-30 135.6 114 74.6
Cpa.g.sc148.44 Carica papaya HOM05D007253 ORTHO05D009055 4.9e-30 135.2 139 66.9
Medtr3g105830 Medicago truncatula HOM05D007253 ORTHO05D009055 6.4e-30 134.8 136 64.7
Phvul.009G086100 Phaseolus vulgaris HOM05D007253 ORTHO05D009055 6.4e-30 134.8 139 66.2
CSS0026470 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 8.4e-30 134.4 111 73.9
CSS0024958 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.1e-29 134.0 110 73.6
COL.COLO4_18974 Corchorus olitorius HOM05D007253 ORTHO05D009055 1.1e-29 134.0 103 82.5
Glyma.06G060300 Glycine max HOM05D007253 ORTHO05D009055 1.1e-29 134.0 143 64.3
ClCG05G016120 Citrullus lanatus HOM05D007253 ORTHO05D009055 1.4e-29 133.7 157 63.1
CiPaw.07G233200 Carya illinoinensis HOM05D007253 ORTHO05D009055 1.9e-29 133.3 131 67.9
Duzib168G0559 Durio zibethinus HOM05D007253 ORTHO05D009055 1.9e-29 133.3 103 83.5
CSS0046604 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 3.2e-29 132.5 149 59.7
CSS0050010 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 3.2e-29 132.5 149 59.7
Glyma.04G059900 Glycine max HOM05D007253 ORTHO05D009055 4.1e-29 132.1 136 62.5
TAR626G1108 Trochodendron aralioides HOM05D007253 ORTHO05D009055 4.1e-29 132.1 142 64.1
Actinidia14140 Actinidia chinensis HOM05D007253 ORTHO05D009055 5.4e-29 131.7 141 62.4
Thecc.09G013200 Theobroma cacao HOM05D007253 ORTHO05D009055 5.4e-29 131.7 105 80.0
TWI63G1073 Tripterygium wilfordii HOM05D007253 ORTHO05D009055 5.4e-29 131.7 152 59.2
MELO3C016946.2 Cucumis melo HOM05D007253 ORTHO05D009055 7.1e-29 131.3 142 64.1
Sed0002011 Sechium edule HOM05D007253 ORTHO05D009055 1.6e-28 130.2 129 63.6
Nn8g40104 Nelumbo nucifera HOM05D007253 ORTHO05D009055 2.1e-28 129.8 103 80.6
Sc09g0010780 Simmondsia chinensis HOM05D007253 ORTHO05D009055 2.7e-28 129.4 146 63.0
Manes.03G007000 Manihot esculenta HOM05D007253 ORTHO05D009055 4.6e-28 128.6 148 61.5
ATR0580G321 Amborella trichopoda HOM05D007253 ORTHO05D009055 1.3e-27 127.1 109 76.1
Dinv03404 Davidia involucrata HOM05D007253 ORTHO05D009055 1.3e-27 127.1 103 77.7
PSO063G6023 Papaver somniferum HOM05D007253 ORTHO05D009055 1.3e-27 127.1 120 70.8
PGR044G0212 Punica granatum HOM05D007253 ORTHO05D009055 1.3e-27 127.1 123 69.9
SalBow8G5515 Salvia bowleyana HOM05D007253 ORTHO05D009055 1.3e-27 127.1 146 61.6
Eucgr.C04033 Eucalyptus grandis HOM05D007253 ORTHO05D009055 2.3e-27 126.3 145 62.1
Gohir.D05G063600 Gossypium hirsutum HOM05D007253 ORTHO05D009055 2.3e-27 126.3 105 76.2
Gorai.009G064300 Gossypium raimondii HOM05D007253 ORTHO05D009055 2.3e-27 126.3 105 77.1
PSO782G0429 Papaver somniferum HOM05D007253 ORTHO05D009055 3.0e-27 125.9 121 70.2
Aqoxy7G03301 Aquilegia oxysepala HOM05D007253 ORTHO05D009055 5.1e-27 125.2 118 52.5
Ciclev10009764m.g Citrus clementina HOM05D007253 ORTHO05D009055 5.1e-27 125.2 105 76.2
HanXRQChr13g0413301 Helianthus annuus HOM05D007253 ORTHO05D009055 6.6e-27 124.8 103 74.8
CARHR116800 Cardamine hirsuta HOM05D007253 ORTHO05D009055 1.1e-26 124.0 108 74.1
Nitab4.5_0000264g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 1.1e-26 124.0 122 63.1
GSVIVG01035999001 Vitis vinifera HOM05D007253 ORTHO05D009055 1.1e-26 124.0 103 76.7
Ah.00g238170 Amaranthus hybridus HOM05D007253 ORTHO05D009055 1.5e-26 123.6 104 72.1
Ah.12g060580 Amaranthus hybridus HOM05D007253 ORTHO05D009055 1.5e-26 123.6 104 72.1
BcaB06g28020 Brassica carinata HOM05D007253 ORTHO05D009055 1.5e-26 123.6 99 78.8
Cc08_g07700 Coffea canephora HOM05D007253 ORTHO05D009055 1.5e-26 123.6 103 74.8
FAN27G1409 Fragaria x ananassa HOM05D007253 ORTHO05D009055 1.5e-26 123.6 145 62.1
MBI14_g31385_MAGBIO Magnolia biondii HOM05D007253 ORTHO05D009055 1.5e-26 123.6 134 63.4
Sp4g03910 Schrenkiella parvula HOM05D007253 ORTHO05D009055 1.5e-26 123.6 99 78.8
A04p19250 Brassica napus HOM05D007253 ORTHO05D009055 1.9e-26 123.2 105 76.2
BolC4t27019H Brassica oleracea HOM05D007253 ORTHO05D009055 1.9e-26 123.2 105 76.2
BraA04t17525Z Brassica rapa HOM05D007253 ORTHO05D009055 1.9e-26 123.2 105 76.2
CANSAT35G1478 Cannabis sativa HOM05D007253 ORTHO05D009055 1.9e-26 123.2 124 63.7
FvH4_2g41340 Fragaria vesca HOM05D007253 ORTHO05D009055 1.9e-26 123.2 145 61.4
Atru.chr7.2576 Acer truncatum HOM05D007253 ORTHO05D009055 2.5e-26 122.9 102 73.5
Hund25608 Selenicereus undatus HOM05D007253 ORTHO05D009055 2.5e-26 122.9 113 65.5
AL4G15950 Arabidopsis lyrata HOM05D007253 ORTHO05D009055 4.3e-26 122.1 99 77.8
AT2G24860 Arabidopsis thaliana HOM05D007253 ORTHO05D009055 4.3e-26 122.1 99 77.8
BcaC02g08395 Brassica carinata HOM05D007253 ORTHO05D009055 5.6e-26 121.7 105 75.2
C04p54740 Brassica napus HOM05D007253 ORTHO05D009055 5.6e-26 121.7 105 75.2
Oeu023241.1 Olea europaea HOM05D007253 ORTHO05D009055 5.6e-26 121.7 147 61.2
Thhalv10000367m.g Eutrema salsugineum HOM05D007253 ORTHO05D009055 7.3e-26 121.3 105 75.2
FAN15G3156 Fragaria x ananassa HOM05D007253 ORTHO05D009055 7.3e-26 121.3 145 60.0
Nitab4.5_0005450g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 7.3e-26 121.3 150 54.0
SGA_v2.0_scaffold4G02163 Striga asiatica HOM05D007253 ORTHO05D009055 7.3e-26 121.3 102 74.5
Prupe.1G396700 Prunus persica HOM05D007253 ORTHO05D009055 9.6e-26 120.9 142 60.6
RcHm_v2.0_Chr6g0299201 Rosa chinensis HOM05D007253 ORTHO05D009055 9.6e-26 120.9 145 60.0
HPP92_010354 Vanilla planifolia HOM05D007253 ORTHO05D009055 9.6e-26 120.9 108 75.9
Potri.006G266800 Populus trichocarpa HOM05D007253 ORTHO05D009055 1.2e-25 120.6 122 66.4
DCAR_000661 Daucus carota HOM05D007253 ORTHO05D009055 1.6e-25 120.2 113 69.9
Carub.0004s0449 Capsella rubella HOM05D007253 ORTHO05D009055 2.1e-25 119.8 104 74.0
THA.LOC104803610 Tarenaya hassleriana HOM05D007253 ORTHO05D009055 2.8e-25 119.4 114 72.8
Aa31LG7G11560 Aethionema arabicum HOM05D007253 ORTHO05D009055 4.7e-25 118.6 137 59.1
MSTRG.13960 Avicennia marina HOM05D007253 ORTHO05D009055 8.1e-25 117.9 104 73.1
EL10Ac2g02465 Beta vulgaris HOM05D007253 ORTHO05D009055 1.4e-24 117.1 116 66.4
Os09g0423700 Oryza sativa ssp. japonica HOM05D007253 ORTHO05D009055 1.4e-24 117.1 117 65.8
Solyc08g006620.3 Solanum lycopersicum HOM05D007253 ORTHO05D009055 1.4e-24 117.1 99 70.7
Sopen08g002570 Solanum pennellii HOM05D007253 ORTHO05D009055 1.4e-24 117.1 99 70.7
Lsat_1_v5_gn_6_77860 Lactuca sativa HOM05D007253 ORTHO05D009055 1.8e-24 116.7 100 75.0
Potri.018G016400 Populus trichocarpa HOM05D007253 ORTHO05D009055 1.8e-24 116.7 94 78.7
CDE05G3047 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 2.4e-24 116.3 99 77.8
Migut.E01444 Erythranthe guttata HOM05D007253 ORTHO05D009055 3.1e-24 115.9 104 72.1
CAN.G285.13 Capsicum annuum HOM05D007253 ORTHO05D009055 4.0e-24 115.5 102 66.7
ECA240G1715 Erigeron canadensis HOM05D001941 ORTHO05D002198 6.9e-24 114.8 94 74.5
MD15G1043300 Malus domestica HOM05D007253 ORTHO05D009055 2.0e-23 113.2 131 62.6
CDE02G4354 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 2.6e-23 112.8 89 79.8
unitig_32.g11120 Utricularia gibba HOM05D007253 ORTHO05D009055 7.6e-23 111.3 97 76.3
vmacro05116 Vaccinium macrocarpon HOM05D007253 ORTHO05D009055 1.1e-21 107.5 145 55.2
Zm00001eb313320 Zea mays HOM05D007253 ORTHO05D009055 3.2e-21 105.9 81 61.7
SEGI_37228 Sequoiadendron giganteum HOM05D007253 ORTHO05D009055 4.2e-21 105.5 119 60.5
TAR383G0216 Trochodendron aralioides HOM05D007253 ORTHO05D009055 4.2e-21 105.5 79 83.5
MD08G1052200 Malus domestica HOM05D007253 ORTHO05D009055 1.2e-20 104.0 82 62.2
AagrBONN_evm.TU.Sc2ySwM_117.2542 Anthoceros agrestis HOM05D007253 ORTHO05D009055 2.1e-20 103.2 92 71.7
Pp3c6_11160 Physcomitrium patens HOM05D007253 ORTHO05D009055 6.0e-20 101.7 142 56.3
Mapoly0121s0030 Marchantia polymorpha HOM05D007253 ORTHO05D009055 2.3e-19 99.8 129 54.3
Peaxi162Scf00045g01937 Petunia axillaris HOM05D007253 ORTHO05D009055 9.6e-18 94.4 75 80.0
AUR62032436 Chenopodium quinoa HOM05D007253 ORTHO05D009055 1.6e-17 93.6 75 80.0
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 4.0e-16 89.0 75 72.0
SMO196G0205 Selaginella moellendorffii HOM05D007253 ORTHO05D009055 1.2e-15 87.4 81 66.7
Gohir.A05G061100 Gossypium hirsutum HOM05D007253 ORTHO05D009055 6.4e-06 55.1 43 62.8


User provided reference genes

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