Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.14G097400 Glycine max HOM05D005314 ORTHO05D006522 1.3e-188 662.9 350 100.0
Phvul.001G037500 Phaseolus vulgaris HOM05D005314 ORTHO05D006522 8.2e-170 600.5 350 90.3
VMungo0647G2045 Vigna mungo HOM05D005314 ORTHO05D006522 3.4e-168 595.1 357 88.0
Ca_13152_v3 Cicer arietinum L. HOM05D005314 ORTHO05D006522 5.1e-164 581.3 350 88.6
Psat6g021480 Pisum sativum HOM05D005314 ORTHO05D006522 1.3e-159 566.6 350 88.0
Lj1g0000731 Lotus japonicus HOM05D005314 ORTHO05D006522 4.2e-158 561.6 351 84.9
Medtr1g015820 Medicago truncatula HOM05D005314 ORTHO05D006522 3.6e-157 558.5 352 86.1
Glyma.06G053100 Glycine max HOM05D005314 ORTHO05D006522 6.7e-156 554.3 350 85.1
TPR.G13039 Trifolium pratense HOM05D005314 ORTHO05D006522 1.3e-154 550.1 352 85.5
Glyma.17G227100 Glycine max HOM05D005314 ORTHO05D006522 1.8e-153 546.2 350 85.1
Phvul.009G078900 Phaseolus vulgaris HOM05D005314 ORTHO05D006522 4.1e-153 545.0 342 83.3
Lalb_Chr11g0063171 Lupinus albus HOM05D005314 ORTHO05D006522 1.2e-149 533.5 351 81.8
Lalb_Chr22g0356141 Lupinus albus HOM05D005314 ORTHO05D006522 1.2e-147 526.9 314 87.9
VMungo1309G2963 Vigna mungo HOM05D005314 ORTHO05D006522 1.3e-146 523.5 342 80.7
Manes.03G050000 Manihot esculenta HOM05D005314 ORTHO05D006522 1.1e-145 520.4 351 75.8
Haze_18156 Corylus avellana HOM05D005314 ORTHO05D006522 5.3e-145 518.1 351 78.1
Cfa017974 Carpinus fangiana HOM05D005314 ORTHO05D006522 1.6e-144 516.5 351 77.2
Prupe.1G409300 Prunus persica HOM05D005314 ORTHO05D006522 2.0e-144 516.2 351 77.2
QL02p000736 Quercus lobata HOM05D005314 ORTHO05D006522 3.5e-144 515.4 350 77.1
RcHm_v2.0_Chr6g0311221 Rosa chinensis HOM05D005314 ORTHO05D006522 1.3e-143 513.5 350 76.6
Thecc.09G057100 Theobroma cacao HOM05D005314 ORTHO05D006522 1.3e-143 513.5 351 75.5
FvH4_2g31600 Fragaria vesca HOM05D005314 ORTHO05D006522 2.2e-143 512.7 350 76.3
CiPaw.16G027100 Carya illinoinensis HOM05D005314 ORTHO05D006522 2.5e-142 509.2 351 76.6
CiPaw.15G037000 Carya illinoinensis HOM05D005314 ORTHO05D006522 1.2e-141 506.9 351 75.8
Actinidia30326 Actinidia chinensis HOM05D005314 ORTHO05D006522 2.7e-141 505.8 352 76.7
COL.COLO4_21084 Corchorus olitorius HOM05D005314 ORTHO05D006522 2.7e-141 505.8 351 75.2
PGR044G2019 Punica granatum HOM05D005314 ORTHO05D006522 4.7e-141 505.0 352 75.6
Gohir.D13G194600 Gossypium hirsutum HOM05D005314 ORTHO05D006522 6.1e-141 504.6 351 75.5
TWI34G0632 Tripterygium wilfordii HOM05D005314 ORTHO05D006522 6.1e-141 504.6 351 74.9
Gorai.013G220600 Gossypium raimondii HOM05D005314 ORTHO05D006522 8.0e-141 504.2 351 75.5
Dinv22878 Davidia involucrata HOM05D005314 ORTHO05D006522 1.0e-140 503.8 350 75.4
Glyma.04G052700 Glycine max HOM05D005314 ORTHO05D006522 1.4e-140 503.4 308 87.3
TWI32G0330 Tripterygium wilfordii HOM05D005314 ORTHO05D006522 1.4e-140 503.4 351 74.9
Gohir.A13G187700 Gossypium hirsutum HOM05D005314 ORTHO05D006522 3.0e-140 502.3 351 75.2
MD15G1056700 Malus domestica HOM05D005314 ORTHO05D006522 5.2e-140 501.5 350 75.4
CANSAT25G2280 Cannabis sativa HOM05D005314 ORTHO05D006522 8.8e-140 500.7 353 75.4
CsaV3_4G035770 Cucumis sativus L. HOM05D005314 ORTHO05D006522 8.8e-140 500.7 351 74.1
TAR369G0158 Trochodendron aralioides HOM05D005314 ORTHO05D006522 2.0e-139 499.6 351 75.8
TAR636G1106 Trochodendron aralioides HOM05D005314 ORTHO05D006522 2.0e-139 499.6 351 75.8
Gorai.001G022500 Gossypium raimondii HOM05D005314 ORTHO05D006522 3.4e-139 498.8 351 74.1
Gohir.A07G021950 Gossypium hirsutum HOM05D005314 ORTHO05D006522 1.7e-138 496.5 351 73.2
MD08G1064900 Malus domestica HOM05D005314 ORTHO05D006522 2.8e-138 495.7 350 74.9
ClCG05G017990 Citrullus lanatus HOM05D005314 ORTHO05D006522 3.7e-138 495.4 350 74.0
Sp6g31630 Schrenkiella parvula HOM05D005314 ORTHO05D006522 3.7e-138 495.4 349 73.6
Potri.018G060500 Populus trichocarpa HOM05D005314 ORTHO05D006522 4.8e-138 495.0 350 73.1
Eucgr.C03058 Eucalyptus grandis HOM05D005314 ORTHO05D006522 1.8e-137 493.0 351 74.6
FAN27G1630 Fragaria x ananassa HOM05D005314 ORTHO05D006522 2.4e-137 492.7 350 74.0
Lalb_Chr14g0366381 Lupinus albus HOM05D005314 ORTHO05D006522 3.1e-137 492.3 278 91.4
Sopen06g012940 Solanum pennellii HOM05D005314 ORTHO05D006522 4.1e-137 491.9 351 73.8
THA.LOC104811236 Tarenaya hassleriana HOM05D005314 ORTHO05D006522 5.4e-137 491.5 349 72.5
CSS0005464 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 7.0e-137 491.1 352 73.9
CAN.G130.11 Capsicum annuum HOM05D005314 ORTHO05D006522 7.0e-137 491.1 351 73.8
Solyc06g036780.3 Solanum lycopersicum HOM05D005314 ORTHO05D006522 9.1e-137 490.7 351 73.5
A10p25800 Brassica napus HOM05D005314 ORTHO05D006522 1.2e-136 490.3 349 72.2
Potri.006G226000 Populus trichocarpa HOM05D005314 ORTHO05D006522 1.2e-136 490.3 350 72.3
Sed0001440 Sechium edule HOM05D005314 ORTHO05D006522 2.0e-136 489.6 347 72.6
AUR62009122 Chenopodium quinoa HOM05D005314 ORTHO05D006522 3.5e-136 488.8 349 73.1
C09p64870 Brassica napus HOM05D005314 ORTHO05D006522 4.5e-136 488.4 349 71.9
MSTRG.25961 Avicennia marina HOM05D005314 ORTHO05D006522 5.9e-136 488.0 351 72.6
Ciclev10008891m.g Citrus clementina HOM05D005314 ORTHO05D006522 1.3e-135 486.9 342 75.1
Migut.A00114 Erythranthe guttata HOM05D005314 ORTHO05D006522 1.3e-135 486.9 351 72.1
AL6G22740 Arabidopsis lyrata HOM05D005314 ORTHO05D006522 1.7e-135 486.5 349 71.9
AT5G11960 Arabidopsis thaliana HOM05D005314 ORTHO05D006522 1.7e-135 486.5 349 71.9
BolC9t59318H Brassica oleracea HOM05D005314 ORTHO05D006522 1.7e-135 486.5 349 71.6
BcaNung02637 Brassica carinata HOM05D005314 ORTHO05D006522 2.9e-135 485.7 349 71.3
PSO210G6321 Papaver somniferum HOM05D005314 ORTHO05D006522 2.9e-135 485.7 352 71.9
Thhalv10014010m.g Eutrema salsugineum HOM05D005314 ORTHO05D006522 3.8e-135 485.3 349 72.2
PSO210G6435 Papaver somniferum HOM05D005314 ORTHO05D006522 1.1e-134 483.8 352 71.6
Carub.0006s1050 Capsella rubella HOM05D005314 ORTHO05D006522 3.3e-134 482.3 349 71.1
Nn8g38796 Nelumbo nucifera HOM05D005314 ORTHO05D006522 3.3e-134 482.3 355 72.7
arahy.Tifrunner.gnm1.ann1.VQ1HGR Arachis hypogaea HOM05D005314 ORTHO05D006522 4.2e-134 481.9 351 76.4
GSVIVG01035376001 Vitis vinifera HOM05D005314 ORTHO05D006522 4.2e-134 481.9 354 72.6
BraA10t44644Z Brassica rapa HOM05D005314 ORTHO05D006522 5.5e-134 481.5 361 69.8
Hma1.2p1_0544F.1_g175630 Hydrangea macrophylla HOM05D005314 ORTHO05D006522 7.2e-134 481.1 350 72.0
A02p01290 Brassica napus HOM05D005314 ORTHO05D006522 4.7e-133 478.4 349 70.8
BraA02t05108Z Brassica rapa HOM05D005314 ORTHO05D006522 4.7e-133 478.4 349 70.8
SalBow4G3021 Salvia bowleyana HOM05D005314 ORTHO05D006522 6.1e-133 478.0 351 70.7
Aa31LG3G15270 Aethionema arabicum HOM05D005314 ORTHO05D006522 1.4e-132 476.9 361 69.3
BcaC03g13403 Brassica carinata HOM05D005314 ORTHO05D006522 1.4e-132 476.9 349 70.5
C02p05500 Brassica napus HOM05D005314 ORTHO05D006522 1.4e-132 476.9 349 70.5
BolC2t06496H Brassica oleracea HOM05D005314 ORTHO05D006522 1.4e-132 476.9 349 70.5
Aqoxy7G04033 Aquilegia oxysepala HOM05D000411 ORTHO05D006522 2.3e-132 476.1 343 72.6
Cc08_g10890 Coffea canephora HOM05D005314 ORTHO05D006522 3.0e-132 475.7 351 72.1
MELO3C016882.2 Cucumis melo HOM05D005314 ORTHO05D006522 6.8e-132 474.6 351 71.5
ECA233G4949 Erigeron canadensis HOM05D005314 ORTHO05D006522 9.8e-131 470.7 352 72.4
Lsat_1_v5_gn_6_14601 Lactuca sativa HOM05D005314 ORTHO05D006522 3.7e-130 468.8 350 71.7
Peaxi162Scf01088g00005 Petunia axillaris HOM05D005314 ORTHO05D006522 2.4e-129 466.1 331 73.7
arahy.Tifrunner.gnm1.ann1.UTD444 Arachis hypogaea HOM05D005314 ORTHO05D006522 5.4e-129 464.9 350 73.7
Hund19438 Selenicereus undatus HOM05D005314 ORTHO05D006522 1.2e-128 463.8 349 71.3
SGA_v2.0_scaffold20G09204 Striga asiatica HOM05D005314 ORTHO05D006522 1.2e-128 463.8 398 64.8
Rhsim11G0042200 Rhododendron simsii HOM05D005314 ORTHO05D006522 2.7e-128 462.6 373 68.1
CDE06G1634 Ceratophyllum demersum HOM05D005314 ORTHO05D006522 1.0e-127 460.7 351 70.4
ATR0789G137 Amborella trichopoda HOM05D005314 ORTHO05D006522 3.8e-127 458.8 352 68.8
arahy.Tifrunner.gnm1.ann1.GAY7D4 Arachis hypogaea HOM05D005314 ORTHO05D006522 1.1e-126 457.2 350 72.9
HanXRQChr08g0226511 Helianthus annuus HOM05D005314 ORTHO05D006522 2.5e-126 456.1 349 69.9
Sabra18G0054400 Salix brachista HOM05D005314 ORTHO05D006522 2.5e-126 456.1 414 61.1
FAN24G2134 Fragaria x ananassa HOM05D005314 ORTHO05D006522 4.3e-126 455.3 307 76.5
FAN15G2750 Fragaria x ananassa HOM05D005314 ORTHO05D006522 7.3e-126 454.5 307 76.5
Atru.chr7.1939 Acer truncatum HOM05D005314 ORTHO05D006522 4.0e-124 448.7 278 80.9
MBI01_g21122_MAGBIO Magnolia biondii HOM05D005314 ORTHO05D006522 5.6e-118 428.3 342 68.7
HPP92_007653 Vanilla planifolia HOM05D005314 ORTHO05D006522 4.4e-115 418.7 344 63.4
DCAR_007733 Daucus carota HOM05D005314 ORTHO05D006522 4.9e-114 415.2 401 60.1
Sc23g0005690 Simmondsia chinensis HOM05D005314 ORTHO05D006522 2.4e-113 412.9 349 63.0
Lj8A530G14 Lonicera japonica HOM05D005314 ORTHO05D006522 3.0e-111 406.0 295 74.2
arahy.Tifrunner.gnm1.ann1.6D5JL1 Arachis hypogaea HOM05D005314 ORTHO05D006522 6.2e-109 398.3 351 66.1
Oeu003996.1 Olea europaea HOM05D005314 ORTHO05D006522 1.5e-107 393.7 335 62.7
Sabra06G0174700 Salix brachista HOM05D005314 ORTHO05D006522 6.4e-106 388.3 417 54.9
Duzib150G1607 Durio zibethinus HOM05D005314 ORTHO05D006522 4.0e-100 369.0 228 78.9
vmacro00123 Vaccinium macrocarpon HOM05D005314 ORTHO05D006522 1.2e-99 367.5 292 68.2
Dinv28005 Davidia involucrata HOM05D005314 ORTHO05D006522 5.6e-94 348.6 228 76.3
EL10Ac2g03829 Beta vulgaris HOM05D005314 ORTHO05D006522 2.1e-93 346.7 349 58.5
unitig_88.g27677 Utricularia gibba HOM05D005314 ORTHO05D006522 1.4e-92 344.0 384 51.6
Sed0024799 Sechium edule HOM05D005314 ORTHO05D006522 4.4e-91 339.0 246 72.4
Gohir.D07G021900 Gossypium hirsutum HOM05D005314 ORTHO05D006522 6.2e-85 318.5 210 76.7
Nitab4.5_0000972g0030 Nicotiana tabacum HOM05D005314 ORTHO05D006522 1.9e-81 307.0 396 51.0
Nitab4.5_0000268g0140 Nicotiana tabacum HOM05D005314 ORTHO05D006522 1.5e-78 297.4 350 52.0
Mapoly0049s0128 Marchantia polymorpha HOM05D005314 ORTHO05D006522 6.2e-77 292.0 314 51.0
Ah.10g034130 Amaranthus hybridus HOM05D005314 ORTHO05D006522 3.5e-72 276.2 249 61.0
MD11G1243300 Malus domestica HOM05D005314 ORTHO05D006522 3.3e-70 269.6 169 78.1
CARHR201170 Cardamine hirsuta HOM05D005314 ORTHO05D006522 1.3e-69 267.7 200 68.0
Zm00001eb155260 Zea mays HOM05D005314 ORTHO05D006522 6.2e-69 265.4 249 58.6
Pp3c7_50 Physcomitrium patens HOM05D005314 ORTHO05D006522 7.1e-65 251.9 308 47.1
Hund03325 Selenicereus undatus HOM05D005314 ORTHO05D006522 8.2e-61 238.4 254 53.5
arahy.Tifrunner.gnm1.ann1.IMU44M Arachis hypogaea HOM05D005314 ORTHO05D006522 1.4e-55 221.1 184 69.0
Cpa.g.sc7.159 Carica papaya HOM05D005314 ORTHO05D006522 1.3e-53 214.5 164 70.1
Lj7A260G18 Lonicera japonica HOM05D005314 ORTHO05D006522 2.0e-51 207.2 232 53.0
Os01g0708300 Oryza sativa ssp. japonica HOM05D005314 ORTHO05D006522 1.1e-49 201.4 150 68.0
Cpa.g.sc7.160 Carica papaya HOM05D005314 ORTHO05D006522 1.9e-49 200.7 150 70.7
RcHm_v2.0_Chr1g0383701 Rosa chinensis HOM05D005314 ORTHO05D006522 2.1e-48 197.2 154 63.6
CBR_g50008 Chara braunii HOM05D005314 ORTHO05D006522 1.4e-47 194.5 329 38.6
CSS0003098 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 5.3e-44 182.6 110 81.8
AUR62039137 Chenopodium quinoa HOM05D005314 ORTHO05D006522 1.7e-42 177.6 137 70.1
Cre10.g419700 Chlamydomonas reinhardtii HOM05D005314 ORTHO05D006522 6.1e-40 169.1 352 34.7
PRCOL_00001271 Prasinoderma coloniale HOM05D005314 ORTHO05D006522 5.7e-38 162.5 366 33.9
MCO12G408 Micromonas commoda HOM05D005314 ORTHO05D006522 3.5e-35 153.3 323 34.7
PGSC0003DMG400031356 Solanum tuberosum HOM05D005314 ORTHO05D006522 2.2e-34 150.6 132 67.4
arahy.Tifrunner.gnm1.ann1.TY68CU Arachis hypogaea HOM05D005314 ORTHO05D005864 6.8e-31 139.0 106 76.4
BcaB03g16563 Brassica carinata HOM05D005314 ORTHO05D006522 1.3e-29 134.8 119 62.2
Oeu040341.1 Olea europaea HOM05D005314 ORTHO05D006522 1.2e-24 118.2 80 73.8
CSS0034519 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 1.1e-20 105.1 95 63.2
SEGI_34785 Sequoiadendron giganteum HOM05D005314 ORTHO05D006522 9.1e-20 102.1 79 65.8
Gohir.D07G021800 Gossypium hirsutum HOM05D005314 ORTHO05D006522 7.7e-19 99.0 95 62.1


User provided reference genes

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